KEGG   Hemiscyllium ocellatum (epaulette shark): 132823291
Entry
132823291         CDS       T09720                                 
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
hoc  Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:hoc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hoc03021]
    132823291 (chd1)
   03036 Chromosome and associated proteins [BR:hoc03036]
    132823291 (chd1)
Transcription machinery [BR:hoc03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     132823291 (chd1)
Chromosome and associated proteins [BR:hoc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     132823291 (chd1)
    SLIK complex
     132823291 (chd1)
SSDB
Motif
Pfam: SNF2-rel_dom HTH_CHD1_Hrp3 CDH1_2_SANT_HL1 CHD1-like_C Chromo Helicase_C CHDCT2
Other DBs
NCBI-GeneID: 132823291
NCBI-ProteinID: XP_060692935
LinkDB
Position
2:complement(58838182..59034348)
AA seq 1792 aa
MEGHGDEDSVSNSSGDSSQSDKESGSSSGSSSDGSSSQSDSNDSSDSDSESDSGSQSDSD
SSGSESNTSSSKGKRTVESKVPKTDGAEFWKSNPSILTVQRSAMIRKQQQLQQQQLSSNS
SEQESSSSEDSDDDSSSENTAKHVKRRDEDWQMSGSGSEEEEEEREKSTSGDSESDYQPH
NKVKSRKPQNRIKTKKMKKGKGLKRPADSSDDDDEEHDKRGSRRQATVNVSYKEDEDAKT
DSDDLLEICGEDLPPPAEEEEEFETLERVMESRVGRKGATGATTTTYAVEAEGNPNAGFD
PLREVGEQQYLIKWKGWSHLHNTWESEETLLQQNTKGMKKLENYKKKEEETKRWLKMASP
EDIEYFNCQQELVDDLHRQYQFVERIIAHSNQKSASGHPDYLCKWQGLSYSECSWEDGAL
ISRKFQSHIDAYTNRNQSRCIPMKECKVLKQRPRFVTLKKQPSYIGSADVLELRDYQLNG
LNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYVFHEHQLYGPFLLVVPLSTLTSWQRE
IEMWAPEMNVVVYLGDISSRNMIRTYEWMHPQTKRLKFNILLTTYEILLKDKSFLGGVNW
AFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSW
EVFEEEHGKGREVGYTSLHRELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAVQKQYYKW
ILTRNYKALSKGCKGSTSGFLNIMMELKKCCNHCYLIKIPEDNNFYNRQEALQHLIRNSG
KLILLDKLLCRLKERGHRVLIFSQMVRMLDILAEYLKCRQFCFQRLDGSIKGELRKQALD
HFNAEGSDDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVN
IYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGSNPTNSTPFNKEELAAI
LKFGAEELFKEPEGEEQEPQEMDIDEILCRAETRENEPGPTTVGEELLSQFKVANFSTMD
DDLEPQRNIKDWDDIIPEAQRRRMEEEERQKELEEIYLLPRMRNCAKQISFNGSEGRRRR
RRSSESDSDSVSEGKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLEAIA
RDAELVDKSEVDLRRLGEMVHNGCIKALRESTGQEKTAARRGKVKGPTFRISGVQVNAKL
VIAHEEELAPLHKSIPPDPEDRKKYTIPCHTKAAHFDVDWNKEDDSNLLIGIYEYGYGSW
EMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSKDLARKEAQRLAEANSKKR
KPRNKRSKNVKIVKVEEVQSDSSAPSPSGKSSDEEGEIKDDAAGTKSAKKKLRSEKENEE
KLDQEMVTKKEVEEKEIKKEPKETRKDKKEKEEKKETKEKDIKKDMKDKEDKELIYKDKE
VKEEKVIEAKSEMKEKSKKTDVPVHITASSDPVPITEEAEELDQNTFSICKERMRPVKAA
LKQLDRPEKGLSEKEQLEHTRQCLIKIGDHITECLKEYSNPEQIKQWRKNLWIFVSKFTE
FDARKLHKLYKHAIKKRLENSRHNDQHSSSLNIHNAKHTESEKPKENSHHDDSSRDSHSS
ERHHSSHYHDHHRDRHHGDSYRKGDPSRKRPYSSFSNGKDHRDRDHYRSDGRYYSESKHR
KLDHRNREHRSGTEASSKESKSHVDHRSSSEHRSHSDHRSSSEYSGHHKSSRDYRYHSDW
PVDHRPSSSGPRSPLDQKSPYDSRSPLEHRSPLEYSSDHKSTPEHIWNSRKT
NT seq 5379 nt   +upstreamnt  +downstreamnt
atggagggtcacggtgacgaggacagcgtcagtaacagcagtggagactccagccaatct
gacaaagaatctggttcaagttctggaagcagcagtgatggaagcagcagtcaatcagat
agcaatgactccagtgactctgatagtgaatctgactctggcagccagtccgattctgat
tcatctggttcagaaagcaacacatcatcatccaaaggaaagagaacagttgagagcaaa
gttccaaaaactgatggagcagagttttggaaatccaatccaagtattttaactgtgcag
cgatctgccatgatcagaaagcagcaacaactacaacagcaacagctttcttcaaacagt
tcagagcaggagtcatcaagtagtgaagattctgatgatgattcatcctctgagaacact
gccaaacatgtgaaacgcagagatgaagactggcagatgtctgggtctggttctgaggag
gaggaggaagagcgagagaaaagtacctcaggagacagcgagtctgactaccaaccccac
aacaaagtaaaaagcaggaaacctcagaacaggatcaaaacaaaaaaaatgaagaaggga
aaaggactaaagagaccagctgattcatcagatgacgatgatgaagaacatgataagagg
ggttctcggcgtcaggcaacagttaatgtcagttacaaggaagatgaggatgctaaaact
gattctgatgacttacttgaaatctgtggggaggatctcccccctccagccgaggaagaa
gaagaatttgaaacattggagagagtaatggagtcacgagtaggacggaaaggagcaact
ggtgccactaccactacctatgcagttgaggctgagggtaatcctaatgctgggtttgac
cctttgagggaggtaggagagcaacagtacctgattaaatggaagggctggtcccacctc
cacaacacctgggaaagtgaggaaacacttttacagcaaaatacaaaaggaatgaaaaaa
ttagagaactacaaaaaaaaggaagaggaaaccaaacgatggttaaaaatggcatctcct
gaagatatagaatacttcaactgtcaacaggaattagttgatgatttgcatcggcaatat
caatttgtggaacgaataattgcacattcgaaccagaaatctgcttcagggcatccagac
tacctgtgcaaatggcaaggcctttcatactctgagtgtagctgggaggatggtgctctt
atatccagaaagtttcagtcacacatcgatgcatatacaaaccgaaatcaatccagatgc
atccccatgaaggagtgcaaggttttaaagcaaagaccgaggtttgtcacactaaagaag
cagccaagctatataggaagtgctgatgtgttggaactccgagattatcaattgaatggt
ttaaattggttggcacactcctggtgcaagaacaatagtgttatccttgctgatgaaatg
ggtcttgggaaaaccatacaaaccatctcctttctcagctatgtgttccacgagcaccag
ctgtatggcccattcctattagtagttccgctctcaacgctcacttcctggcaacgagaa
attgaaatgtgggcgcctgaaatgaatgtcgtagtttacttgggggacatcagtagccgt
aatatgataagaacatatgaatggatgcatcctcagactaaacggttgaaatttaatata
ttattaacaacatacgaaatcttgctgaaggacaagtcattcctcggaggtgtaaactgg
gctttcattggagtagatgaagcccatcgtctgaagaatgatgactcgctcctgtataaa
accatgattgacttcaagtcaaatcacaggctactcataactgggactccactccaaaac
tcactcaaagaactctggtccctccttcacttcatcatgccagaaaaattttcttcctgg
gaagtgtttgaagaggaacatggtaaaggaagagaagttggatacacaagccttcatcga
gaacttgagccattcttgctgcgacgagtgaaaaaagatgttgaaaagtctctacctgct
aaagttgaacaaatcttgcgagtagagatgagtgcagtccaaaagcaatattacaaatgg
attttaaccaggaattataaagccctgagcaaagggtgtaaaggcagcacttccggcttt
ctcaatatcatgatggaacttaaaaaatgttgtaaccactgctacctcattaaaattcca
gaagataataatttctataacagacaggaggccttacagcatttgatccgtaatagcggg
aagctgatactgttggacaagttgctttgtcgactaaaggaacgaggccacagagttctt
atcttctcccaaatggttcggatgctggatattttagcagaatatttgaaatgccgacag
ttttgtttccagcgactagatggatctattaagggcgagttaaggaagcaagcactggac
catttcaatgcagaaggatcagatgatttctgctttctgctatcaaccagagcaggaggg
ttgggtataaacctggcatccgcagatactgtagttattttcgattcagactggaatcca
cagaatgatttacaggcacaagcaagagctcacagaattggtcagaaaaagcaggttaat
atatatcggctagttacaaagggaacagtagaagaagaaatcattgaaagagcaaagaaa
aagatggtgctggatcaccttgttatacaacgaatggatacaacagggaaaactgtgcta
catactggctccaatcctacaaattctacaccttttaataaagaagagctggcagctatc
ctgaagtttggagctgaggaactttttaaagaacccgaaggagaggaacaagaaccacag
gaaatggatattgatgaaatcctttgtcgtgctgaaactcgtgagaatgaacctgggcct
accactgtgggagaagagctgctatcccaattcaaggtggcaaacttttccacgatggac
gatgaccttgagcctcagcgtaatatcaaggactgggatgacattattccagaagcacaa
cggagaagaatggaagaggaagaacgacagaaagaacttgaagagatctacttgcttcct
cgaatgcgtaactgtgccaaacagattagctttaatggcagtgaagggaggcgaagaaga
agacgttcttcagaatcagatagtgactccgtttctgaagggaaacgtccgaaaaaacgt
gggagaccgcgaacaattccgcgtgaaaatattaaaggttttagtgatgctgaaattcga
agatttatcaagagctacaagaagtttggcggacctctggaaaggttagaagcaattgca
cgcgatgctgaactggtagataagtcagaggttgatctcaggcggttaggagagatggtg
cacaatggctgtatcaaagctctgcgagagtccaccggccaggagaaaacagctgcaagg
cgtgggaaagtaaaggggccaacattccgaatctcgggtgttcaggtgaacgctaagcta
gtcattgctcatgaagaggaactggcacctttgcacaaatccattccaccagacccagag
gacaggaagaagtacactatcccatgtcatactaaagcagctcactttgatgtggattgg
aacaaggaagatgactccaatcttttaataggcatctatgaatatggctatggtagctgg
gaaatgattaagatggatcctgatctcagtttaacacacaagattttacctgatgaccca
gataagaagcctcaggccaaacaattgcagaccagagctgactacctcatcaaattactt
agtaaagacctggccagaaaggaggcgcaaaggcttgctgaggctaattcaaaaaaaagg
aagccaaggaataaaaggagtaaaaatgtaaaaattgtgaaagtagaagaagttcaaagt
gattcatcagcaccatcaccttcaggcaaaagttcagatgaagaaggagagatcaaggat
gatgctgcaggaacaaagtctgcaaaaaagaaattgaggtcagaaaaagaaaatgaagag
aagttagaccaagaaatggtaactaagaaagaagttgaagagaaagaaatcaaaaaagaa
ccaaaagaaacgagaaaagacaaaaaagaaaaggaggaaaagaaagaaacaaaagaaaaa
gatatcaaaaaagatatgaaagacaaagaggataaagaacttatttataaagataaagaa
gtaaaagaagaaaaggtaattgaagctaagtcagagatgaaggagaagtctaaaaagacc
gatgtcccagttcatattacagcaagcagtgatccagttcccatcacagaggaagcagaa
gaacttgatcaaaacacatttagtatttgtaaagaaagaatgagacctgtaaaggcagca
ttgaagcagttggacaggcctgaaaaaggcctctcagaaaaggagcaactagaacatacc
aggcagtgcctgattaaaattggagaccacatcactgaatgtttgaaagagtactcaaat
ccagaacaaatcaagcaatggcgaaaaaatctctggatctttgtttcaaagttcacagaa
tttgatgcaagaaagctccacaagctatacaaacatgcaatcaagaaacggctggagaac
tctcggcataatgatcaacacagtagtagcctcaacatccataacgccaaacacacagaa
tctgaaaaacctaaagagaattctcaccatgatgatagcagtagggatagccattcatct
gaacgacaccactcctcgcattatcacgaccaccacagagatcgacatcatggggattcc
tatcgaaaaggcgatccctcaagaaagagaccatattcctcgtttagcaatggcaaagac
catcgagacagagatcattaccggtcagatggcaggtactacagtgaaagcaaacacaga
aaacttgatcacagaaatcgtgaacaccggtctggcacggaggccagttcaaaggagagt
aaatcacatgtagatcacagatccagctcagagcatcgatcacattcagatcaccgatcc
agttcagaatactcaggccatcacaaatcctccagggattatagataccactcagactgg
ccagtggaccacagaccatctagcagtggaccaaggtcacccttggaccagaagtcccct
tatgactccagatcgccattggaacacagatctccccttgagtattcctctgatcacaaa
agtacccctgagcacatctggaacagccgtaaaacataa

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