| Entry |
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| Symbol |
chd1
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| Name |
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
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| KO |
| K11367 | chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] |
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| Organism |
hoc Hemiscyllium ocellatum (epaulette shark)
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| Brite |
KEGG Orthology (KO) [BR:hoc00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:hoc03021]
132823291 (chd1)
03036 Chromosome and associated proteins [BR:hoc03036]
132823291 (chd1)
Transcription machinery [BR:hoc03021]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
132823291 (chd1)
Chromosome and associated proteins [BR:hoc03036]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
132823291 (chd1)
SLIK complex
132823291 (chd1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2:complement(58838182..59034348)
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| AA seq |
1792 aa
MEGHGDEDSVSNSSGDSSQSDKESGSSSGSSSDGSSSQSDSNDSSDSDSESDSGSQSDSD
SSGSESNTSSSKGKRTVESKVPKTDGAEFWKSNPSILTVQRSAMIRKQQQLQQQQLSSNS
SEQESSSSEDSDDDSSSENTAKHVKRRDEDWQMSGSGSEEEEEEREKSTSGDSESDYQPH
NKVKSRKPQNRIKTKKMKKGKGLKRPADSSDDDDEEHDKRGSRRQATVNVSYKEDEDAKT
DSDDLLEICGEDLPPPAEEEEEFETLERVMESRVGRKGATGATTTTYAVEAEGNPNAGFD
PLREVGEQQYLIKWKGWSHLHNTWESEETLLQQNTKGMKKLENYKKKEEETKRWLKMASP
EDIEYFNCQQELVDDLHRQYQFVERIIAHSNQKSASGHPDYLCKWQGLSYSECSWEDGAL
ISRKFQSHIDAYTNRNQSRCIPMKECKVLKQRPRFVTLKKQPSYIGSADVLELRDYQLNG
LNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYVFHEHQLYGPFLLVVPLSTLTSWQRE
IEMWAPEMNVVVYLGDISSRNMIRTYEWMHPQTKRLKFNILLTTYEILLKDKSFLGGVNW
AFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSW
EVFEEEHGKGREVGYTSLHRELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAVQKQYYKW
ILTRNYKALSKGCKGSTSGFLNIMMELKKCCNHCYLIKIPEDNNFYNRQEALQHLIRNSG
KLILLDKLLCRLKERGHRVLIFSQMVRMLDILAEYLKCRQFCFQRLDGSIKGELRKQALD
HFNAEGSDDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVN
IYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGSNPTNSTPFNKEELAAI
LKFGAEELFKEPEGEEQEPQEMDIDEILCRAETRENEPGPTTVGEELLSQFKVANFSTMD
DDLEPQRNIKDWDDIIPEAQRRRMEEEERQKELEEIYLLPRMRNCAKQISFNGSEGRRRR
RRSSESDSDSVSEGKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLEAIA
RDAELVDKSEVDLRRLGEMVHNGCIKALRESTGQEKTAARRGKVKGPTFRISGVQVNAKL
VIAHEEELAPLHKSIPPDPEDRKKYTIPCHTKAAHFDVDWNKEDDSNLLIGIYEYGYGSW
EMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSKDLARKEAQRLAEANSKKR
KPRNKRSKNVKIVKVEEVQSDSSAPSPSGKSSDEEGEIKDDAAGTKSAKKKLRSEKENEE
KLDQEMVTKKEVEEKEIKKEPKETRKDKKEKEEKKETKEKDIKKDMKDKEDKELIYKDKE
VKEEKVIEAKSEMKEKSKKTDVPVHITASSDPVPITEEAEELDQNTFSICKERMRPVKAA
LKQLDRPEKGLSEKEQLEHTRQCLIKIGDHITECLKEYSNPEQIKQWRKNLWIFVSKFTE
FDARKLHKLYKHAIKKRLENSRHNDQHSSSLNIHNAKHTESEKPKENSHHDDSSRDSHSS
ERHHSSHYHDHHRDRHHGDSYRKGDPSRKRPYSSFSNGKDHRDRDHYRSDGRYYSESKHR
KLDHRNREHRSGTEASSKESKSHVDHRSSSEHRSHSDHRSSSEYSGHHKSSRDYRYHSDW
PVDHRPSSSGPRSPLDQKSPYDSRSPLEHRSPLEYSSDHKSTPEHIWNSRKT |
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| NT seq |
5379 nt +upstreamnt +downstreamnt
atggagggtcacggtgacgaggacagcgtcagtaacagcagtggagactccagccaatct
gacaaagaatctggttcaagttctggaagcagcagtgatggaagcagcagtcaatcagat
agcaatgactccagtgactctgatagtgaatctgactctggcagccagtccgattctgat
tcatctggttcagaaagcaacacatcatcatccaaaggaaagagaacagttgagagcaaa
gttccaaaaactgatggagcagagttttggaaatccaatccaagtattttaactgtgcag
cgatctgccatgatcagaaagcagcaacaactacaacagcaacagctttcttcaaacagt
tcagagcaggagtcatcaagtagtgaagattctgatgatgattcatcctctgagaacact
gccaaacatgtgaaacgcagagatgaagactggcagatgtctgggtctggttctgaggag
gaggaggaagagcgagagaaaagtacctcaggagacagcgagtctgactaccaaccccac
aacaaagtaaaaagcaggaaacctcagaacaggatcaaaacaaaaaaaatgaagaaggga
aaaggactaaagagaccagctgattcatcagatgacgatgatgaagaacatgataagagg
ggttctcggcgtcaggcaacagttaatgtcagttacaaggaagatgaggatgctaaaact
gattctgatgacttacttgaaatctgtggggaggatctcccccctccagccgaggaagaa
gaagaatttgaaacattggagagagtaatggagtcacgagtaggacggaaaggagcaact
ggtgccactaccactacctatgcagttgaggctgagggtaatcctaatgctgggtttgac
cctttgagggaggtaggagagcaacagtacctgattaaatggaagggctggtcccacctc
cacaacacctgggaaagtgaggaaacacttttacagcaaaatacaaaaggaatgaaaaaa
ttagagaactacaaaaaaaaggaagaggaaaccaaacgatggttaaaaatggcatctcct
gaagatatagaatacttcaactgtcaacaggaattagttgatgatttgcatcggcaatat
caatttgtggaacgaataattgcacattcgaaccagaaatctgcttcagggcatccagac
tacctgtgcaaatggcaaggcctttcatactctgagtgtagctgggaggatggtgctctt
atatccagaaagtttcagtcacacatcgatgcatatacaaaccgaaatcaatccagatgc
atccccatgaaggagtgcaaggttttaaagcaaagaccgaggtttgtcacactaaagaag
cagccaagctatataggaagtgctgatgtgttggaactccgagattatcaattgaatggt
ttaaattggttggcacactcctggtgcaagaacaatagtgttatccttgctgatgaaatg
ggtcttgggaaaaccatacaaaccatctcctttctcagctatgtgttccacgagcaccag
ctgtatggcccattcctattagtagttccgctctcaacgctcacttcctggcaacgagaa
attgaaatgtgggcgcctgaaatgaatgtcgtagtttacttgggggacatcagtagccgt
aatatgataagaacatatgaatggatgcatcctcagactaaacggttgaaatttaatata
ttattaacaacatacgaaatcttgctgaaggacaagtcattcctcggaggtgtaaactgg
gctttcattggagtagatgaagcccatcgtctgaagaatgatgactcgctcctgtataaa
accatgattgacttcaagtcaaatcacaggctactcataactgggactccactccaaaac
tcactcaaagaactctggtccctccttcacttcatcatgccagaaaaattttcttcctgg
gaagtgtttgaagaggaacatggtaaaggaagagaagttggatacacaagccttcatcga
gaacttgagccattcttgctgcgacgagtgaaaaaagatgttgaaaagtctctacctgct
aaagttgaacaaatcttgcgagtagagatgagtgcagtccaaaagcaatattacaaatgg
attttaaccaggaattataaagccctgagcaaagggtgtaaaggcagcacttccggcttt
ctcaatatcatgatggaacttaaaaaatgttgtaaccactgctacctcattaaaattcca
gaagataataatttctataacagacaggaggccttacagcatttgatccgtaatagcggg
aagctgatactgttggacaagttgctttgtcgactaaaggaacgaggccacagagttctt
atcttctcccaaatggttcggatgctggatattttagcagaatatttgaaatgccgacag
ttttgtttccagcgactagatggatctattaagggcgagttaaggaagcaagcactggac
catttcaatgcagaaggatcagatgatttctgctttctgctatcaaccagagcaggaggg
ttgggtataaacctggcatccgcagatactgtagttattttcgattcagactggaatcca
cagaatgatttacaggcacaagcaagagctcacagaattggtcagaaaaagcaggttaat
atatatcggctagttacaaagggaacagtagaagaagaaatcattgaaagagcaaagaaa
aagatggtgctggatcaccttgttatacaacgaatggatacaacagggaaaactgtgcta
catactggctccaatcctacaaattctacaccttttaataaagaagagctggcagctatc
ctgaagtttggagctgaggaactttttaaagaacccgaaggagaggaacaagaaccacag
gaaatggatattgatgaaatcctttgtcgtgctgaaactcgtgagaatgaacctgggcct
accactgtgggagaagagctgctatcccaattcaaggtggcaaacttttccacgatggac
gatgaccttgagcctcagcgtaatatcaaggactgggatgacattattccagaagcacaa
cggagaagaatggaagaggaagaacgacagaaagaacttgaagagatctacttgcttcct
cgaatgcgtaactgtgccaaacagattagctttaatggcagtgaagggaggcgaagaaga
agacgttcttcagaatcagatagtgactccgtttctgaagggaaacgtccgaaaaaacgt
gggagaccgcgaacaattccgcgtgaaaatattaaaggttttagtgatgctgaaattcga
agatttatcaagagctacaagaagtttggcggacctctggaaaggttagaagcaattgca
cgcgatgctgaactggtagataagtcagaggttgatctcaggcggttaggagagatggtg
cacaatggctgtatcaaagctctgcgagagtccaccggccaggagaaaacagctgcaagg
cgtgggaaagtaaaggggccaacattccgaatctcgggtgttcaggtgaacgctaagcta
gtcattgctcatgaagaggaactggcacctttgcacaaatccattccaccagacccagag
gacaggaagaagtacactatcccatgtcatactaaagcagctcactttgatgtggattgg
aacaaggaagatgactccaatcttttaataggcatctatgaatatggctatggtagctgg
gaaatgattaagatggatcctgatctcagtttaacacacaagattttacctgatgaccca
gataagaagcctcaggccaaacaattgcagaccagagctgactacctcatcaaattactt
agtaaagacctggccagaaaggaggcgcaaaggcttgctgaggctaattcaaaaaaaagg
aagccaaggaataaaaggagtaaaaatgtaaaaattgtgaaagtagaagaagttcaaagt
gattcatcagcaccatcaccttcaggcaaaagttcagatgaagaaggagagatcaaggat
gatgctgcaggaacaaagtctgcaaaaaagaaattgaggtcagaaaaagaaaatgaagag
aagttagaccaagaaatggtaactaagaaagaagttgaagagaaagaaatcaaaaaagaa
ccaaaagaaacgagaaaagacaaaaaagaaaaggaggaaaagaaagaaacaaaagaaaaa
gatatcaaaaaagatatgaaagacaaagaggataaagaacttatttataaagataaagaa
gtaaaagaagaaaaggtaattgaagctaagtcagagatgaaggagaagtctaaaaagacc
gatgtcccagttcatattacagcaagcagtgatccagttcccatcacagaggaagcagaa
gaacttgatcaaaacacatttagtatttgtaaagaaagaatgagacctgtaaaggcagca
ttgaagcagttggacaggcctgaaaaaggcctctcagaaaaggagcaactagaacatacc
aggcagtgcctgattaaaattggagaccacatcactgaatgtttgaaagagtactcaaat
ccagaacaaatcaagcaatggcgaaaaaatctctggatctttgtttcaaagttcacagaa
tttgatgcaagaaagctccacaagctatacaaacatgcaatcaagaaacggctggagaac
tctcggcataatgatcaacacagtagtagcctcaacatccataacgccaaacacacagaa
tctgaaaaacctaaagagaattctcaccatgatgatagcagtagggatagccattcatct
gaacgacaccactcctcgcattatcacgaccaccacagagatcgacatcatggggattcc
tatcgaaaaggcgatccctcaagaaagagaccatattcctcgtttagcaatggcaaagac
catcgagacagagatcattaccggtcagatggcaggtactacagtgaaagcaaacacaga
aaacttgatcacagaaatcgtgaacaccggtctggcacggaggccagttcaaaggagagt
aaatcacatgtagatcacagatccagctcagagcatcgatcacattcagatcaccgatcc
agttcagaatactcaggccatcacaaatcctccagggattatagataccactcagactgg
ccagtggaccacagaccatctagcagtggaccaaggtcacccttggaccagaagtcccct
tatgactccagatcgccattggaacacagatctccccttgagtattcctctgatcacaaa
agtacccctgagcacatctggaacagccgtaaaacataa |
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