Hemiscyllium ocellatum (epaulette shark): 132823294
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Entry
132823294 CDS
T09720
Symbol
gemin5
Name
(RefSeq) gem-associated protein 5
KO
K13133
gem associated protein 5
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132823294 (gemin5)
03041 Spliceosome [BR:
hoc03041
]
132823294 (gemin5)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132823294 (gemin5)
mRNA cycle factors
P-body specific factors
132823294 (gemin5)
Spliceosome [BR:
hoc03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
132823294 (gemin5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_GEMI5
GEMI5_RBS
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_RIG_2nd
WD40
Beta-prop_EML_2
WD40_Prp19
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_RIG_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_Nup120_160
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_DCAF12
TPR_IF140-IFT172
WD_LRWD1
Lgl_C
Motif
Other DBs
NCBI-GeneID:
132823294
NCBI-ProteinID:
XP_060692934
LinkDB
All DBs
Position
16:complement(78311723..78387974)
Genome browser
AA seq
1513 aa
AA seq
DB search
MPGRLLTPSPNWYCSRCSDTSPRGILGFGAKNSIFLLEVSPGQPLILGELAGHTERVTGF
TFCQHPGLVDICASTSDDGTIKVWDIQTKTVLQEHSAHQSPITAVHWSPLKKELVVSGDE
KGIVICWWYNRNDTHHFFPEPRTIFCLSCSPHNEDQVAVGYKDGMIVIIDINRKGEVIHR
LRGHDGEIHFLSWCPQLCEPQFLSDATSDTLGLNGELMTEDTAKDCFLASGSRDQTIRIW
NTTKGKGVITLKLPSLKRRGGGTDAGIKERIWLTVHWSRSCPTQLFSSCFGGELLLWDLT
KTGKQKWTLLGSSSEGQNHSRIVFNLSSVSLQDNCELLLSTSMDRDVKCWDLNTLDCCWT
QPTLGGFVYSLAFSPVNIGSLAIGVGDSMIRVWDTLSLQRAYDIKTLWQGIKSKVTALCW
HPTKESSLAFGTEDGKVGIYEIYSNKPPQISSSYHRKTVYALAWGPPLPPMATGGDGDGP
GVSLYSCAGEGIILQHNPWKLTADAQDINRLIRDTNGIKHKLPGRSELNWKPDGKILAIG
NDDGSIEIFQAPHLKLLCTIQTHHKLVNAIRWHHPHGTQPELSSLIASGSNNAIIYVHNL
KTVLESPPDSPTTVTEPYRTLPGHTAKITSLAWSPHHDGRLVSACYDGTAQVWDILKEEP
LSNYRGHIGRLLGVQWSPVDPNCVWTGGDDFTVRQWEVSKQEHTRPPKGKKSIELEKKRP
NCAKPKSKKARKRTEKGSVGQDGEETRENSTQSVVGSRNSSADQAEEEEEEDSRDETEMA
KLSNGTSRTPVSLNEPRALENTERVLPNSLHTNLSQTPQGKPDRLKDERRRERAEVAMKK
KKGRSILPLSTINDHRSKEELLSDCVNLANILYSKESESQSRPGSGAEIQLGLYADRPAL
YRMFKEEGQNHLEAGHSEVCYQLMLWKGDIGGALEMATERGELNDALVAMAPMAGYTVWV
RTVEAFSKQLCFQEQYVKAATYLLYIHKVYEAVKLLQSHQLFREAIAIAKARLQPDDPLL
KELYTNCAGVMEKDGHYTIAAKCYLTARSPYDAAKILARKGDIPSLRAAATVASIVGEQE
LSSLFSSRCSLDLLAQRDWQAAQDVLRPQEGLLGHRLVLCTYELLYRYLADGNLTLWKSM
NTPCYHDWTLQSDKPLIRSVIAIWQSEFGITPANTERLKTGHQQLRMTEHPAASPNTPPR
LLMLYLAHDLSVAIACSLLSDWAQMVTALLSAVHRCVNAGDFTLMQEVSKITLSEGEDFT
SDLEAKLTGSDQVGLAALRSLCAFHCYGQLYQLWWGLAADHSGMSAGRRQADTEEGLQVD
GTLGSLDQPVAAPSDLGSTAEGGQSAARNLPSGCALLLSPEHAKLQALHRQMADIQQAVT
GLVSQHQRRLAGPEETPEGGPHLDQEAEPEPTEDPTPNHHGSEPPLSKETSSMTTLMGQL
RDVTQQQSELPETVKLHPFPDVVESSLVVLSISSLVPSIVPSEIRNQAATLVQTYGTARP
YQRAAQRILPGTA
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaggttgctgactccgtccccgaactggtattgtagccgctgcagtgacacc
agcccccggggaatcctcggcttcggagccaagaacagcatcttcctgctggaggtcagc
ccgggccagcctctcatcctcggagagttggcaggacatacggaaagggtcactgggttc
accttctgtcagcacccaggtcttgtggacatctgcgccagtacgtctgatgatggcacc
attaaggtctgggatattcagacgaaaactgtactgcaagaacactccgctcaccagagt
cccatcactgctgtgcactggtctcccctgaagaaggagctggtggtgtctggagatgag
aaagggattgtgatctgttggtggtataacagaaatgatacgcaccactttttcccggaa
ccccgaaccattttctgcctgtcctgctcccctcataatgaagaccaggtggctgtgggg
tataaagatgggatgatcgtcatcattgatataaaccggaaaggagaggtgatacacaga
ttgcggggtcatgatggagagattcatttcctgtcctggtgcccgcagctctgcgagccg
cagttcctcagtgatgccacctcagatacactgggactgaatggtgagctcatgacagag
gacactgcgaaggattgtttcctggcatcgggaagcagggaccagacaattcggatctgg
aacaccacaaagggcaaaggtgtgattactctgaagttgccgtcacttaaacgaagaggc
ggaggaacagatgcgggaataaaggaacgtatttggctgacggtgcattggtctcgaagc
tgtcccacccaattattctccagctgtttcgggggggagctgctgctctgggatttgacc
aagacggggaagcagaagtggacactgctggggtcgtcatcagaaggacagaatcacagc
aggattgtcttcaacttgagttcggtctccctgcaggataactgtgagctattgctgtcg
acctcgatggaccgagatgtgaagtgttgggaccttaatacactggactgttgctggacg
cagcctacacttggaggctttgtctacagtctggcattctcccctgtgaatatcggctcc
cttgctatcggtgtgggtgacagtatgatcagggtgtgggacaccctgtcccttcagcgt
gcttatgacatcaagactctatggcaaggaatcaaatccaaggtcactgctttgtgctgg
cacccaaccaaagagagttcattggcattcggaactgaggatggcaaagttggcatttat
gaaatttattcaaacaagccccctcagatttccagctcctatcacaggaagactgtttac
gctctggcttggggaccaccactgccccccatggcgactggcggtgatggggatgggccg
ggcgttagtctgtacagctgtgcgggtgaggggatcatccttcagcacaacccctggaaa
ctgacggcagatgcccaggacatcaaccggttaatccgggacaccaatggaatcaagcat
aaacttccaggtcgcagtgaactgaactggaaacctgatggtaaaatcctggctattggg
aacgacgatgggtcgattgagatcttccaggctcctcacttgaagttgctatgcaccatc
cagacgcaccacaagctggtgaatgctatccgctggcatcacccacacggcacacaacct
gagctcagctccctcatcgcctccggctccaacaatgccattatctacgttcacaacctg
aaaaccgtgctggagagccctccggacagtccaacaacagtgactgaaccgtacaggacg
ttaccagggcatactgcgaagatcacgagtctggcgtggagccctcaccacgatggaagg
ctggtgtcagcctgctatgatggcactgcacaggtctgggacatcctgaaggaggagcct
ctgagcaactatcgaggccacatcgggaggttgctgggggtccagtggtctccagttgat
ccgaactgtgtgtggacaggaggcgatgacttcacagtacggcagtgggaggtctcaaag
caagaacatacccgaccacccaaaggaaagaagtccatcgagttggagaagaaaaggccc
aactgcgcgaaacccaaatcgaaaaaggccaggaagcgaaccgagaaggggagcgttggg
caggatggggaagagacccgggaaaactcaacgcagagtgtggtaggcagtaggaacagc
agcgccgaccaagcggaggaagaggaggaggaagacagtcgggacgagacagagatggca
aagttgtccaatgggacttctcgaaccccggtttcactgaatgagcccagagcattggag
aacacggaacgcgttcttcccaacagcctacacaccaacctgagccaaactccccagggg
aagccagaccggctgaaggatgagaggaggagggagcgagcagaggtggctatgaagaag
aagaaaggacgatctattctcccactcagtacgatcaacgatcaccgctcaaaggaggag
cttctctcggactgtgtgaatctcgctaacatcctctactcgaaagagtctgagagccag
agtcggccaggatcgggagctgaaatccagctgggtctctatgcggacaggccagctctg
tacaggatgttcaaggaggaagggcagaatcatctagaagctgggcattctgaggtctgt
taccagctgatgttgtggaaaggtgacattggaggagctttggagatggccactgagagg
ggagagctcaacgacgctttagttgctatggcgcccatggctgggtacacagtttgggtg
cgaacagttgaagccttttccaaacagctgtgtttccaggaacagtatgtgaaggctgcc
acttacctgctgtatatccacaaggtctacgaagccgtgaagcttctccagtctcaccag
ctgttccgcgaagccattgccattgccaaagcccggttacaacccgatgatccattgttg
aaggaactttacaccaactgtgccggtgtcatggagaaagacggccattacacaatcgca
gccaagtgctatttgacggcccgatccccttacgatgcggctaagatcttggcgaggaag
ggcgacataccttcgctacgggcggctgcgacggtggcctccattgtcggcgagcaggag
ctgtcctccttgttctcctccagatgctctttggatctgttggcccagcgtgactggcag
gcggcgcaagatgtcctgcgcccacaggagggtttgttgggccacaggttggtgctgtgt
acgtatgagttactgtaccggtaccttgctgacgggaacctgactctgtggaagagtatg
aacacaccatgctaccacgactggaccttacagagcgataagcccctcattcgttcagtg
attgccatttggcaaagtgagtttgggatcacaccagccaatactgaacgactgaagaca
ggacatcagcagctcaggatgactgaacacccagcggcatctcccaacaccccgcccaga
ctgctgatgctgtacttggctcatgacctgagtgtggccatagcctgcagtctgctgtct
gactgggcccagatggtcactgccttactcagtgccgtacatcgatgtgtcaatgctgga
gacttcactctgatgcaggaagtcagcaagatcactctctcggaaggagaggatttcacc
tctgacctggaggccaagttgactggctctgaccaagtgggcctagcggctctccgcagc
ctgtgtgctttccactgttatggacagctgtaccagctgtggtgggggctggctgcagat
cattccggaatgtcggcgggcaggaggcaggctgacacggaggaggggctgcaggtggat
ggaacgctggggagcctagaccaaccagtcgctgccccctctgacctcgggagcactgca
gaggggggtcagtctgcagccaggaacctcccgtccggctgtgccttgttactatcaccg
gaacacgccaaactccaggccctgcacagacagatggctgatatccaacaggcagtcact
gggcttgtcagtcagcaccagaggcgattggccgggccggaggagactccggaaggtggg
ccgcacctggaccaggaggccgagcctgaaccaacagaagaccccacgccaaaccatcat
ggctctgagccccctttaagtaaggagaccagctcgatgacaactctgatgggacagctc
cgggacgtcacccagcagcagtcagagctgccagagactgtaaagcttcaccctttccct
gacgttgtcgagagcagtctcgtcgtcctctccatctcctcactcgttccatccatcgtt
ccctccgagatccgaaaccaagctgcgacgctggttcagacctacgggacagctcggccg
tatcaaagggcagcgcagaggatcctcccggggacagcctga
DBGET
integrated database retrieval system
