Hemiscyllium ocellatum (epaulette shark): 132823301
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Entry
132823301 CDS
T09720
Name
(RefSeq) protocadherin gamma-A7-like
KO
K16499
protocadherin delta 2
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hoc04515
]
132823301
Cell adhesion molecules [BR:
hoc04515
]
Cadherins
Protocadherins
132823301
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
132823301
NCBI-ProteinID:
XP_060692945
LinkDB
All DBs
Position
16:79972213..79974747
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AA seq
797 aa
AA seq
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MATVVMSRVSIFLLCISALVSEQLRYSIPEEMEHGTFAGNVADDLGLRVWELPTRKLLLI
SDYSKKYMEVNVENGFLFVNERIDREQLCSKTAACSLSFQITLYDPLEMYPVEVEILDVN
DNSPVFSRKEFDLQINELIAPGARFPLESARDLDVGKNTINTYQINPNEHFGIKVQTRRG
GNKNVELILKRHLDREQQSMFTLVLTAIDGGIPQRSGTARIIINVMDANDNTPVFDHETY
RASAIENIANGTLVLRVHATDIDEGTNAEITYSFTHYVSQNIRDLFKLDPVSGEIRVRGV
LDFEETNVYEFDVQAMNSAPPEFSTLANVVIDVIDTNDNTPVLQVTMVSSAVREDSSSGI
SVALIGVTDRDSGEYGEVHCQIPENIPFKIEKSLKGNYKLITNGFLDHEITPLYNISISA
WDGGFPPLSASTLIVVSVIDVNDNSPSFTQSSYNVYLMENNAPGASIFAVSANDADLNQN
AEVSYSIVDNRQKEEIPSSAYFTMNSKNGNIYALRSFDYEQQKHFQVKVQAQDSGSPPLT
STAFVNVIILDQNDNAPIIVSPLTWNSSAIVEVIPLSTYPGYLVTKVIATDEDSGQNARL
SYELLETTDPSLFTVGHLSGEIRATRAFSDQDIIDVRVVLSVKDNGQPSLSSRATISFIV
KSNVTEKSFEQRDGPRHSEYFSGINSYLIIIFGSTSFLFLIIILFLLTLKCRQDRNTAEI
YSSAVCCCNGGNSTDAFNRTPTGRDPLNYSGAVQTGSYHYSVCLSPESSKSDFLFLKPCH
PTLPFNDRSVRDSNARN
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgttgtgatgagccgagtgtccatttttttgctctgcatttctgccctggtt
tccgaacaacttcgctactcgattcccgaggaaatggaacatggaacctttgctggcaac
gtcgctgacgatctaggattaagggtttgggagttaccgactcgcaaattactgctgatt
tctgattactcgaagaaatacatggaggtaaatgtagaaaatggtttcctttttgttaat
gaaagaatcgacagagaacagctttgtagcaaaaccgctgcatgttctctttctttccaa
atcacgctctatgatcctttggaaatgtatcccgttgaagtggaaatactagacgtaaat
gataattcacccgtcttttcgaggaaggaattcgatttgcaaattaatgagttaattgcg
ccgggcgctcgcttccctctcgagagcgcacgtgatctggacgtgggtaaaaacacaatc
aacacctaccagatcaatccgaacgagcacttcggtattaaagtgcagacaagaagaggg
gggaataaaaatgtcgagctgatattaaagaggcatttggaccgtgaacaacagtcaatg
tttactctagtgttgacggctatcgatggtgggattccgcagagatctggcacagcgcgg
atcatcattaatgtcatggacgcaaatgacaacacacccgtattcgatcatgaaacctac
agggcgtcagcgattgaaaacattgcgaatggcactttagtgctaagagttcatgctact
gatattgatgaagggacaaacgcggagataacatattctttcactcattacgtttcccag
aatattcgtgatttgttcaaattggatcctgtgtctggagaaatcagagttcgaggtgta
ctagattttgaagaaacaaatgtttatgaatttgacgttcaagcaatgaactccgctcca
cctgaattctcaactcttgcaaatgttgtcattgatgtaattgacactaatgataatact
cctgtgttgcaagttacgatggtgtccagtgctgtgcgggaagattcttcttcgggaatt
agtgtagctctgatcggcgtcacggatcgcgattctggcgaatatggggaagttcattgt
caaatcccagagaatattcccttcaagattgaaaaatctttgaagggcaactacaagttg
attaccaatggctttctggatcatgagattaccccactgtacaacatctccatttcagcc
tgggacggtggatttcctcctctttcagcgagtacattaattgtggtttcagtaattgat
gtcaatgataattcaccaagttttacgcagtcgtcatataacgtttatctgatggagaat
aacgcacccggtgcttctatatttgctgttagtgcaaatgatgctgatttgaatcagaat
gcagaagtctcttattccattgtcgacaatcgacagaaagaagaaataccttcctctgcg
tactttacgatgaactccaaaaatgggaacatttacgcgcttcgctccttcgactacgag
caacagaaacatttccaggtgaaagttcaagctcaggatagtgggtcgcctccattgacc
agcactgcctttgtgaatgttattattttggatcaaaatgacaatgcacccattattgtt
tcacctttaacatggaacagctcagcaatagtggaggtaatacccctttcaacatatcca
ggatatctggtcaccaaggtaattgccacggatgaagactctggtcagaacgcaaggctt
tcctacgagttattggaaaccactgatccaagtctttttactgttggacatctctctgga
gaaattagagcaacgcgagcatttagtgatcaagatatcattgacgtgcgcgtggtcctc
agcgtgaaggacaatggacagccgagcctttccagcagggccacaatatcctttatcgta
aagtccaatgttactgagaaatcatttgaacaacgtgatggacccagacactcggaatat
ttttcaggtataaatagttatctaatcataattttcggatccacttcctttttgtttctc
ataataatattatttttgctcaccctgaagtgcagacaagatagaaatactgctgaaatt
tatagctctgcagtctgttgttgtaatgggggaaattcgactgatgcctttaatcggaca
ccaacaggaagggatcctttgaattatagcggggcagttcagaccggaagttatcattac
agtgtgtgcttgtcaccggaatcatcgaagagtgactttctgtttttaaaaccttgtcat
cctacgttgcctttcaacgatcggagtgttcgtgacagcaacgcaagaaactaa
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