Hemiscyllium ocellatum (epaulette shark): 132823343
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Entry
132823343 CDS
T09720
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1 isoform X1
KO
K03265
peptide chain release factor subunit 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132823343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132823343
03012 Translation factors [BR:
hoc03012
]
132823343
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
132823343
Translation factors [BR:
hoc03012
]
Eukaryotic type
Release factors
132823343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
132823343
NCBI-ProteinID:
XP_060693041
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Position
16:14711198..14778199
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AA seq
437 aa
AA seq
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MADDPTAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGTGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISSDKVNVAGLILAGSADFKTELSQSD
MFDPRLQSKVLKLVDISYGGENGFNQAIELSAEVLSSVKFIQEKKLIGRYFDEISQDTGK
YCFGVDDTLKALEMGAVEILIVYENLDIMRYVLRCHGTEEEKILYLTPEQEKDKSHFTDK
ETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQ
GMEYQGDEEDFYDLDDY
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacccgaccgcagccgacaggaacgtggagatctggaagatcaagaagctc
atcaagagcctggaggccgccagagggaatggcaccagtatgatttcgctcatcattcct
cctaaagaccagatctcacgagtcgcaaaaatgttggcggatgagttcggcactgcttcg
aacattaagtctcgagtaaaccgtctgtctgtgctgggggccattacatctgtgcagcag
cgtcttaaactatacaataaagtaccacctaatggtttggttgtctactgtggaacaatt
gtaacagaagaaggcaaagaaaagaaagttaacattgattttgagcccttcaaaccaatt
aacacatccctatatctctgtgacaataaatttcatacagaggctctcactgcgctactg
tctgatgacagcaaatttgggttcatcgtaattgatggcactggagctttgttcggtaca
ctccagggaaacacgcgggaggtactacacaagttcactgtggatctaccaaagaagcac
ggcagaggaggtcaatcagctctgcgttttgctcgcctgagaatggagaagagacacaac
tatgtgcggaaggtagcagagacggctgtgcagctcttcatcagcagcgacaaggtgaac
gtagcaggtctaatcttggctggatcagctgatttcaaaactgaactcagccagtctgat
atgtttgatccgcgattgcagagcaaagtactgaaactagtggacatctcttatggaggt
gagaatggttttaatcaagcaatcgaactgtcggctgaagtcttgtccagtgtgaagttc
attcaggagaagaaactaatagggcgatattttgatgaaatcagccaggatacaggaaaa
tactgcttcggagtggatgacacgttgaaagcgctggagatgggtgcagttgaaattctg
atagtttacgaaaatctagatataatgcgatatgttctccgctgtcacggcacagaagaa
gagaaaatcttgtacctgacacctgaacaagagaaggataaatcccatttcacagacaaa
gagactggacaggaacatgaactgatagaaagcatgcccctcctggagtggtttgccaac
aactacaaaaaatttggagctaccctggagatcgtcacagacaagtcgcaagaaggatct
cagtttgtgaaaggctttggtgggattggtggtatcctgcggtaccgagtggactttcaa
ggtatggaataccagggagatgaggaagacttttatgacctggacgactactag
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