Hemiscyllium ocellatum (epaulette shark): 132823407
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Entry
132823407 CDS
T09720
Symbol
rack1
Name
(RefSeq) small ribosomal subunit protein RACK1
KO
K14753
guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132823407 (rack1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hoc04147
]
132823407 (rack1)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
132823407 (rack1)
Exosome [BR:
hoc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132823407 (rack1)
Exosomal proteins of colorectal cancer cells
132823407 (rack1)
Exosomal proteins of bladder cancer cells
132823407 (rack1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
eIF2A
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
WDR54
Cytochrom_D1
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
132823407
NCBI-ProteinID:
XP_060693198
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All DBs
Position
16:complement(47185422..47197380)
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AA seq
317 aa
AA seq
DB search
MTEQMTLRGTLKGHSGWVTQIATTPQFPDMILSASRDKSIIMWKLTRDETSYGVPQRSLS
GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHAKDVLSVAFSADNRQI
VSGSRDKTVKLWNTLGVCKYTIQDECHNEWISCVRFSPNSSNPIIVSCGWDKLVKVWNLA
NCKLKTNHIGHSGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC
FSPNRYWLCAATGPSIKIWDLEGKIIVDELRQEVISTSSKAEPPQCTCLAWSADGQTLFA
GYTDNLIRVWQVTIGTR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcagatgaccctacgcggtaccctaaaaggccatagtggctgggtgacacaa
atcgccaccacgccgcagtttcccgacatgattctctccgcgtcccgagataaatctatc
atcatgtggaagctaactagggatgagaccagctatggcgtaccacaacgttccctcagt
ggtcactctcactttgttagtgatgtagtcatttcttctgatggtcaatttgctctttcc
ggctcctgggatggaactctacgactttgggatttgacaacggggacgactacccgtcga
tttgtgggtcatgccaaagacgtgctgagtgttgccttttcagcagataatcgccaaatt
gtgtctggttcccgtgacaagactgtaaaactgtggaacactctgggcgtttgcaaatac
acaattcaggatgaatgccacaatgaatggatatcttgtgttcgcttctctccaaatagc
agcaaccccatcatcgtctcctgtggctgggataaattagttaaggtttggaacctagcc
aactgcaaactgaaaacaaatcatattgggcactctggctacctgaacactgttacggtt
tcccctgatggatccctgtgtgcttctggaggcaaggatggtcaagccatgttgtgggat
ctcaatgaaggcaaacatttgtacacattagatggtggtgacatcatcaatgccttgtgc
tttagccccaataggtattggttgtgtgctgctacaggtccaagtattaaaatctgggac
ctggaaggaaaaatcattgtggatgaactacgtcaggaagtgattagtaccagcagtaaa
gcagaacctccacagtgtacatgtctggcttggtctgcagatggacagacgttgtttgct
ggttatactgataacctcatcagagtttggcaggttaccattggaacaagatga
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