Hemiscyllium ocellatum (epaulette shark): 132823623
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Entry
132823623 CDS
T09720
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132823623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132823623
03036 Chromosome and associated proteins [BR:
hoc03036
]
132823623
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132823623
Coactivators
SAGA/TFTC/STAGA complex
132823623
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
132823623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
132823623
NCBI-ProteinID:
XP_060693535
LinkDB
All DBs
Position
17:complement(3051231..3390483)
Genome browser
AA seq
1145 aa
AA seq
DB search
MAAGPDPLEELFLSEVDEKAVSDLVGSLESQLAGRAVLPGGRRPTLAGDSVPREGQRRAG
GMAPSPLGEKPAAAAAPPAAPSPGPGFGQEAAAGAGLSQRAASACELPPPPANGPPSSGT
SAAGARASGAATPGTGRPPHSYRPPLPAPPSPSPSTSSPAPPLGTTEPGGSVLPLPLLTT
GEPRVSNHLPPAPPGTPPQAVNGVVAVCSSPAVTTTLHFNAGTISGTCSHLPKSGAFGSN
VSSINTPCSSSQNGSQFVSVSQDSILSTSTPTIALTRPPVHTVIASNVLGTALSQNGFVP
HNHVNLPGLVQFGEKTGIHQGAVVTQLAKQTVAVCGPICSLTATNTDSSSQTKLVLHTQS
QPVSLSLLNNTAAPITVTNTPSNQLQYTVTSSLPVTTVPVSINAVAKPAVNIIAQPHVGI
TKVISSAPGIIQVSAAQSQSPRTGLGAPQRIVTPQLIIRSPQQPTVQLASGFTIPPGMIL
VRTDSGQLVMVPQQALAQVQAQAQRPGSISPRPSAPTSVATICLTSSQPAMTISSIRPGH
PLQAKVVQPAATSVNTLSVAASQPAPTAAPTLESGHTSTPQTVCPTTFSGVPSHHVITSQ
AQAQPQTPASSQSQSATKTQLQVQPQVTTSSLLPGTPTVTKVSMASHSAPLGRAGQEMQE
NVKKCKNFLATLIKLASHSGQPADTSWNVKSLVQDLLDSKIEPEEFTNRLQSELNSSPQP
YLVPFLKKSLPALRQSLVRNQQCILQENQKSQGVASAQATSTVPSTGTVSTVMAGSSVRT
QQPITDNTVSGTNIVTQAHINLAQQGRSTHLIIQPPIQTMKRQSGLGAQVRLPVVITPSI
TPVGKTSLHQGSKGLAGSLLQVSANQKNKLSDPASGSFRDDDDINDVTSMAGVNLSEESA
NILATNSNLVGMHIRSCKDETFLASGALHRRVLETAKRFGITDVPIDIVNMISVATQERL
KMVIGKLTSIAQHRMETHKDHEWYEQATDVRMQLKFFEHLERLEKQRKDDQEREILLKAA
KSRSRQEDPEHARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKRDSPGLQATEV
GMAAGEVTRQGAGPTAGPQAGARSALSRQYTRQRVTRVNLRDFIFYMEQERDTRHSLVLY
RALLK
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcccggacccgctggaggagctgttcctgtcagaggtggacgagaaggcg
gtcagcgatctggtgggatcgctggaatcgcagctggcaggccgggcagtgctgcctgga
gggaggaggccaactctggcgggagacagcgtccctcgggagggacagcggcgagccggc
gggatggcgccatcgccgctcggggagaaaccggcggcggcggcggctccccctgcggcc
ccttctcctggccctggcttcggacaggaggcagccgctggagctggtctcagtcagcgt
gcagcctccgcctgcgagctcccgccacctcccgccaacggccccccgtcctcgggcacc
tcagcggccggagcccgggcttcgggtgcagcgaccccggggaccggccgcccccctcac
tcctaccggccaccgcttccagctcctccttccccatcccccagcaccagcagccctgca
ccccctctgggtaccactgaacctggggggagcgtccttcccctgcccctcctaacaaca
ggagagcctcgggtgtcgaaccacctgcccccagcacctcccggaaccccacctcaggct
gtcaatggggtggtcgcagtctgcagctcccctgctgtgactactactttgcacttcaac
gctggaactatctctgggacttgtagccatctccccaagtctggggcttttggctccaat
gtcagtagcatcaacacaccatgcagctcatctcaaaacggttctcaattcgtctctgtg
tctcaagacagcatcctgagtactagcacccccactattgcactcacaagaccgccagtg
catactgtgattgccagcaatgttttgggcactgcactatcacagaatggatttgtcccc
cacaaccatgtgaatctacctggattggtgcaatttggagaaaagacaggcatccatcag
ggtgcagtagtgacacaattggctaaacagactgttgctgtctgtggtccaatttgcagt
ctcacagccaccaatacagactccagttcacagacaaagcttgttctgcacactcagtct
cagcctgtttctcttagtttattaaataacacagctgctccgatcacagtgaccaacact
ccgagcaatcagttgcaatacacggttaccagctctctccctgtaaccactgtgccagtc
agcatcaatgcagttgcaaaacctgcagtcaatataattgcacaacctcatgtcggaatc
acaaaagtcatttcgtctgcccctggcatcatccaagtatcagctgctcagtcacagtct
cctcgtactgggttaggggcaccccaacgcattgtaacccctcagcttatcatccgttca
ccacaacaaccaacagtgcagcttgcttctggtttcaccatcccaccagggatgattttg
gtccggacagacagcggccaacttgtcatggttcctcagcaagcattggctcaggttcaa
gcccaggcacaacgcccaggaagcatctctcccaggccttctgctccaacaagtgttgcc
acaatttgcctaacgtcaagtcagccggccatgaccatctcctcaatcagaccaggacat
ccactgcaagccaaagtagttcaacctgctgccacgtcagtgaacacattgtcggttgct
gcttcacaacctgcccctacagcagctcccactttggaatctgggcataccagcactcca
cagactgtgtgccctacaaccttctctggagtgcccagccatcatgtcatcacatctcaa
gcccaagctcaaccccagacccctgcttcatctcagtcccaatctgcaactaaaactcaa
ttgcaagtccaacctcaagtcacaaccagttctctacttccaggaacacccacagttaca
aaggtgtccatggcatcgcattctgcacctctgggaagagctggacaggaaatgcaggaa
aatgtgaagaaatgcaagaactttctcgcaaccttgataaaactagcatcgcacagcgga
cagcctgcagacacctcctggaatgtgaagagtcttgttcaagacctgctggactctaag
attgaaccagaagagttcactaacagacttcagtcagaacttaactcatctccacagcca
tacctggtgccttttctcaagaaaagtttaccagccttgaggcagtccctggttcggaat
cagcagtgcatcctgcaagaaaatcagaaatcacaaggagtggcctcagcccaggccaca
tcgactgtgccatcgacaggaactgtcagcacagttatggctggatcatctgtacgaaca
caacaacccatcactgataacacagtctcgggaacaaatattgtgacacaggcacacatc
aacttggctcagcaagggcgcagcacacatctgatcatacagcccccaatacagacaatg
aaaaggcaatctggtctaggagctcaagtgagattaccggtggttattaccccatctatc
acaccagtggggaagacatcactacaccaaggaagcaaaggtcttgcaggatcgttgctc
caggtctctgccaatcagaaaaacaagctcagtgaccctgcaagtggctcttttagagac
gatgatgacatcaatgatgttacctcaatggctggagttaatctgagtgaggagagtgcc
aatattctggcaaccaactccaatttagtaggaatgcacattcgctcctgtaaagatgaa
acctttttggctagcggtgctctgcacaggcgtgtcctagaaacagctaaaaggtttgga
atcacggacgttcccattgacatagtaaacatgatttcagtcgcaacgcaggaacggtta
aaaatggtcatcggaaaactgacatcaatagcacaacacagaatggaaacgcacaaggac
catgaatggtacgaacaagcaacagatgttcggatgcaactgaaattctttgaacatctg
gagcgactggaaaaacaacggaaggatgatcaggagagagaaattctattaaaagcagca
aagagtcgctccaggcaagaggaccctgaacatgcgaggctaaagcagaaagcaaaggag
atgcagcagcaggagctggcacagatgagacaacgagatgcaaacttgacagcacttgct
gccatcggcccacgtaagaaacgcaaacgggattccccaggactgcaagcgactgaggtg
ggaatggcagctggcgaggtaaccagacagggtgcaggtcctacagcaggcccccaggca
ggagccagatcagctttgtctcgccagtacacacgacagagggtaactcgggtaaacctc
agggacttcatcttctacatggaacaggaacgagacaccaggcactcactagtactgtac
cgagcactgctgaagtag
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