Hemiscyllium ocellatum (epaulette shark): 132823896
Help
Entry
132823896 CDS
T09720
Name
(RefSeq) type III intermediate filament-like
KO
K07606
vimentin
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132823896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132823896
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hoc04812
]
132823896
04147 Exosome [BR:
hoc04147
]
132823896
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
132823896
Cytoskeleton proteins [BR:
hoc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
132823896
Exosome [BR:
hoc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132823896
Exosomal proteins of other cancer cells
132823896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
TolA_bind_tri
DUF1664
TPR_MLP1_2
GAS
YwqH-like
SPAM
DUF4515
HALZ
Motif
Other DBs
NCBI-GeneID:
132823896
NCBI-ProteinID:
XP_060693984
LinkDB
All DBs
Position
17:23549395..23551142
Genome browser
AA seq
449 aa
AA seq
DB search
MTSKTSVYRKMFVEKPIRTTSGIRSYSSVKPGRSIVPSYSRVSYTVPIKAQSTRRLRSSA
PSAAMSNSLNFSLVEAMNSEFKTNRSNEKAEMIELNDRLAGFLEKVRGLEHQNKMLLVEL
EQLKGKPRSRIGDMYELELRQLRQQIDQINNEKSRIEVERDNLVDDLQKLREKLQDEILQ
REEAENNLAAFRQDVDDACLARLDLERKVESLQEEIMFLKKLHEEEVSELQAQIQESQVK
VEMDMVRPDLTAALHEVRSEFDKLAAKNIAETEAWYKSKLADVNDSAARNNDALRTMKQE
NGDYRRQIQTLTCDIDALKGTNESLERQMQEMEERYALEANNAQETIANLEDEIGNLKDE
MARHLQEYQELLTVKMALDIEIATYRKLLEGEENRISMPLQSFGSLSLADAMYEQQPTDV
QMSRKNVVIKTIESRGGDIISETTQRIED
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaaaacaagtgtctaccgcaagatgttcgtagaaaaacccatccggaccact
tcggggattcgctcgtactcgtctgtgaaaccggggcgaagcatcgttccttcttactcc
agggtcagctacacggtaccgatcaaggcacagagcacacggcgtttgaggagcagcgct
ccctcagcggccatgagcaacagcctcaacttctccctggtggaagccatgaactcggag
ttcaagaccaatcgcagcaatgagaaagccgagatgattgagctgaatgaccgtctggcc
ggcttcctggagaaggtgagagggctcgaacaccagaacaagatgttgctggtcgagctc
gaacagctgaaagggaaaccccggtccaggattggggacatgtacgaactggagctgagg
caactgcggcagcagattgaccagatcaacaacgagaagtccagaatcgaggtggaaaga
gacaacctggtcgacgatctccaaaagctgagggaaaagttgcaagatgaaattcttcag
cgggaggaggctgaaaacaatctggcagctttcagacaggatgtggatgatgcctgtctg
gcacgcttagatctggaacgtaaagttgaatcactgcaggaagaaattatgttcttaaag
aaactacacgaagaggaagttagtgaattacaagctcaaatccaagaatcacaggtcaag
gttgagatggatatggtcagacctgaccttactgcagcactccatgaagttcgttctgag
tttgataagcttgctgctaagaacattgctgaaactgaggcatggtacaagtccaagttg
gcggatgtgaatgattctgctgctcgcaataatgatgctcttcgcacaatgaaacaagag
aatggtgattaccgcagacaaatccagacactgacctgcgatattgatgcacttaaggga
acgaatgaatctcttgagcgccagatgcaggaaatggaagaacgttatgctttggaggca
aataatgcccaggaaaccattgccaaccttgaagatgagattggtaacttgaaggatgag
atggcccgtcatttgcaagaataccaggagctactgactgtaaagatggctctcgatatt
gagattgcaacctacaggaaattgctggagggtgaggaaaacaggatttctatgcctctg
caatcatttggttctctgagtcttgctgatgccatgtatgagcagcagccaactgatgtt
caaatgtcaaggaagaatgttgtcatcaaaacaattgagagcagaggcggagatataatc
agcgaaactacccagagaattgaagactga
DBGET
integrated database retrieval system
