Hemiscyllium ocellatum (epaulette shark): 132823975
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Entry
132823975 CDS
T09720
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hoc03000
]
132823975 (ctcf)
03036 Chromosome and associated proteins [BR:
hoc03036
]
132823975 (ctcf)
Transcription factors [BR:
hoc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
132823975 (ctcf)
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
132823975 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZNF142_18
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-C2H2_15
Zf-C2H2_ZNF451
zf-met
zf-C2HE
zf-C2H2_6
LIM
zf-WIZ
HMBD
DUF7479
Motif
Other DBs
NCBI-GeneID:
132823975
NCBI-ProteinID:
XP_060694146
LinkDB
All DBs
Position
17:52785358..52827519
Genome browser
AA seq
721 aa
AA seq
DB search
MATESENVAVEESEMFTKVKEHKTYQRRREGGQPEDVDGQQKESEGGEVAAQDMNSNVQV
VMMQPLDPTLLQMKQPIEGGAHESDTVDDTQIITLQVVNMEEQPINLGELQLVQVAQSSI
DELQGNYENEAPKDGLQEGDPVICHTLPLPEGFQVVKVGANGEVETVEDGAIEVRENEDA
SAAWQKDPDYQPPVKKVKKKKNKLRYKVDDSKDVDLSVYDFEEEQQEGLLSEVNVEKAVG
TMKPPKPMKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVT
LLRNHLNTHTGTKPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLK
RHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHIL
QKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYLESGKKCRYCDAVFHERYALIQHQK
SHKNEKRFKCELCDYACKQERHMVMHKRTHTGEKPYSCSQCDKTFRQKQLLDMHFKRYHD
PNFIPATFVCTKCGKAFTRKNTMTKHAENCSGPGGEEGDAVERKKNKGRGRKRKMQSKKG
DSTDSDDEDNAEPELDGDEEDETVVSKPEEDEEEEEQPIAEVIPVPAPAKKRRGRPPGKA
NQSNKNTGAVQQLQESGTTTIENIIVEIKKEPEAEDAQVQSGIEAQNGDITPEMILSMMD
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgaatcggaaaatgtggctgtggaagagtcagaaatgtttacgaaggtcaaa
gagcacaaaacttatcaaagacgaagagaaggtggacaaccagaagatgtcgatggacaa
cagaaagaatcggagggtggtgaggtagcagcgcaagatatgaacagcaatgtgcaagtg
gtgatgatgcagccattggaccctacactacttcaaatgaagcagccaattgagggtgga
gctcatgagtcagacactgtagatgacacacagattatcacattgcaggttgtgaatatg
gaagagcagccaataaatcttggggagctgcagcttgtgcaagtagcccaaagcagcatt
gatgaactgcaaggaaactatgaaaatgaagctcccaaagatggacttcaggagggagat
cctgtaatctgtcatactcttcccctaccagaaggctttcaggttgtgaaagtaggtgcc
aatggtgaagtggagacagtggaagatggggcaatagaagtgcgagaaaatgaggatgct
tctgctgcctggcagaaagatcctgattatcagccacctgtaaaaaaagtcaaaaagaaa
aaaaataaactacgctacaaggtggatgattccaaagatgttgacttatctgtatatgat
tttgaagaggagcagcaggaaggtttactttcagaggttaatgtagagaaggcagttgga
actatgaagcctccaaaaccaatgaagattaagaagaaaggggtgaagaaaacattccag
tgtgaattgtgcagctatacttgtccccggcgttctaatctagaccggcacatgaaaagc
cacactgatgagcgaccgcataagtgccacctttgtggtcgagcttttcgaacagttacg
cttctgaggaaccatctcaacacacacacaggtactaaaccacacaagtgtcctgattgt
gacatggcatttgtgaccagtggggagttggtgaggcatcgtcgctacaaacacacacat
gagaagccgttcaagtgctctatgtgtgattatgctagtgtggaggttagtaagttaaag
cgtcatattcgctctcacactggagaacgcccgttccaatgtagcctgtgtagctatgct
agcagggatacctacaagctgaaaaggcacatgaggacccactctggtgagaaaccatat
gaatgctacatctgccatgctcgcttcactcaaagtggcacaatgaagatgcatattttg
cagaaacatacagaaaatgtggcgaaattccactgcccacattgtgacacagttattgct
aggaagagtgatttgggtgttcatctgagaaaacagcattcctatcttgagtcaggcaag
aagtgccgttactgtgatgcagtcttccatgaacgatatgccctcatacagcaccagaaa
tctcataagaatgagaaacgttttaaatgtgaactttgtgattatgcatgcaaacaggaa
cgtcacatggtaatgcacaagcgaactcatactggagagaagccttattcctgtagccag
tgtgacaagacatttcggcagaaacaactattggacatgcacttcaagcgctaccatgat
cctaactttattcctgccacttttgtatgcacaaaatgtggcaaagcattcactcgtaag
aatacaatgacaaaacatgctgagaattgtagtgggccaggaggtgaagaaggagatgct
gtagagcggaagaagaataagggacgtggtaggaaacggaaaatgcagtccaagaaagga
gactccactgacagtgatgatgaggataatgctgaacctgaattagatggtgatgaagag
gatgagactgttgtgagcaaacctgaagaagatgaagaagaagaggagcagcctattgca
gaagtcatccctgtaccagcaccagccaaaaagcgaaggggtagaccacctggcaaagct
aatcaatccaataaaaatactggagcagttcagcagttgcaagaatcagggactacaaca
attgaaaacataattgttgaaataaagaaagagcctgaggctgaagatgcacaagttcaa
tcaggaattgaggctcaaaatggagacatcacacctgagatgatccttagtatgatggac
cggtga
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