Hemiscyllium ocellatum (epaulette shark): 132823981
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Entry
132823981 CDS
T09720
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132823981 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132823981 (edc4)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132823981 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
132823981 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
CelTOS
Beta-prop_EDC4L
Beta-prop_HPS5
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
Beta-prop_EML_2
EIF3I
Motif
Other DBs
NCBI-GeneID:
132823981
NCBI-ProteinID:
XP_060694158
LinkDB
All DBs
Position
17:53893315..54005677
Genome browser
AA seq
1396 aa
AA seq
DB search
MASPPSPASKMDIENATQHLRDMLKLDRVSESTIDKQKKSASYNGELNGLLVPDPIAAGD
GPILRESNSANLDKLNLQQNQEIYLTGDDSSNCVITAKEVEIVASNDSSISNKARGSNKV
KIQPVAKYEWEQKYYYGNLIAVSNQYLAYVIRGANGVGMVRVLSVGMAERTLLKGFTEGV
ADLGFAHLNSNQLACVDEAGNLFVWQLNEENGKIQEKLIVHIKRPEGTPLNANRRVIWCP
FIPEENDENDEGNQTLAVLHEDRAEVWDLDILRNSNNVWPIEATDIKEGFIIVKGHTARI
SEGALSPDGTVLATASHDGYVKFWQIYIEGQDQPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPDVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFMPDPFNTNVYPSLKASLDLSAEYL
ILSDVQRKVLYVMELHQNQDEGKAHFVSISEFLLTHPVLSFGIQDVSRCRPRHIEVLSAE
EESDTLNAEGTPGLVESSIVQLKLYCVHTKTLQDVQIYFQPHQNTEEPVLMSSAASHEDF
TFADRLTDVSVEGPTSEKGSSRDSQHDLRRIVDLPVPTDFLSVSNDVKPKLMTPDAFMTP
STSLQQISVSPGSSVSTLTAVTGLSNSSANETGSSRPAEDLCLSPKVTLENVNLSNNTSN
TVQASPRNNSVQLIPGLSEQLSTKPLQVVGANSSLPLELQSVDPLCVPQSSPTRERSPDV
ISSASTALSQDIPEIASETLQRAFSSSVLPTEVLEPTHHMDSMASAASALHLLSPRSRPN
SEHSHHSLDMPQVEVERLSTPSLLETVLSQENTAADNVVSQPWPAAPDITRETRNSINES
SREDMQEKHKNSAFHRHPYQLHQHDSQDASAEQSDHDDEVASLASTSCSFGSKSASHRLP
VKDWKSKTSPRSSPKLRRKSKKDDGETAQSPRLEQQQQFNTDQEELLSLLRSQQRELSEL
RQSQLELMQRLTDHMDAVQGSIMGHVERIMVTQQEQEQRRMDRILAEGHERNGQFQEQLS
HQLSQNLANSISNRIEKTVRDEMKKTLPQSISKSLEPVSGQLNNHIATKLAAIEGILKEN
ITKMVKSKNTVESIGRAAADALQGPIQSSYRESFQSIVVPVFEKACQSMFQQINDSFKQG
TQEYIQQLEIHLQSKKTQEQEIRDPLISQLQQMIDRFQSVTDHLAATITNGMRSEVQHQL
HIIVSNLQESILTQVQRIVKGEVSLAMKEQQAVVTSSIMQAMRSAAGTPIPTTHMDFQSQ
QAHILQLLQQGQLNQAFQQALTAADLNLVLYVCETVDSQLVFGQHPCPLTQPVLLSLIQQ
LSTDLNSRTELKLSYLEDAVMNLDHTDPVARDHMGSVLNQVRQKLYQFNQAEPHSNLSKR
ARRLMMMLQGLVTPLS
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccaccgagcccggcttctaagatggatatcgagaacgccactcaacacctc
cgggatatgctgaagctggaccgggtctccgagtcaacaattgataagcagaagaaatct
gcatcgtacaatggagaattgaatggtttgctggttccagatccaattgcagctggagat
gggcccattctcagagaatcaaatagtgcgaatttggacaagctgaacctacagcaaaat
caggaaatataccttacaggtgatgacagttcaaattgtgttataactgccaaagaagtg
gaaattgtggcaagcaatgattcgagcatcagtaataaggccaggggtagcaacaaggta
aaaatacaacctgtggcaaagtatgaatgggagcagaaatactactatggcaacctcata
gcagtgtcaaatcagtacttggcatatgtcatcagaggggctaatggtgttggcatggta
cgagtattgagtgttggaatggctgaacgaactttgctgaaaggatttactgagggagtt
gctgatttgggttttgcacatctcaattccaatcaactggcatgcgttgatgaagcaggc
aacctatttgtctggcaactgaatgaagaaaatgggaaaatacaggaaaaactcatagtg
cacatcaagagaccagagggaacacctttaaatgcaaacaggagggttatctggtgccct
tttattcctgaggaaaatgatgaaaatgatgaaggaaatcaaacacttgctgttttacat
gaagatagggctgaagtctgggatctggatattctacgaaacagtaataatgtttggccc
attgaagcaactgatataaaagaaggctttattattgtgaaagggcacacagcacggatc
agtgaaggtgcgttatctccagatggaacagtacttgcaactgcgagccatgatggttat
gtaaagttctggcagatctacatagaagggcaagatcaaccaagatgtcttcatgaatgg
aagccccatgatggccgaccgttatcatgcctacttttttgtgacaatcacaaaaagcaa
gatccagatgtccctttctggcgtttccttatcactggagcagatcagaatagggagctg
aagatgtggtgtacagtgtcatggacttgtttacagaccatcaggtttatgcctgaccct
tttaataccaatgtgtacccaagtctgaaagccagcctggatctatctgcagaatacctc
atcctcagtgatgtacagagaaaagtgttgtatgtgatggagctacatcagaaccaggat
gaaggcaaagcccattttgtctccatatctgagtttttgctgactcacccagtacttagc
tttggcatccaggatgtcagtaggtgtcgcccaaggcatatcgaggttctgtcagctgag
gaggaaagtgacactttaaatgcagaaggaactcctggccttgttgaatcttcaatagta
cagctaaaactgtactgtgtacacaccaaaacacttcaggacgtgcagatttatttccaa
ccacatcagaatacagaagaacccgttttaatgtcatctgctgcctcccatgaagatttc
acttttgcagatcgcttaacggatgtaagtgttgaagggccaacatctgaaaagggatct
agccgagattctcagcatgatttgcggcgtatagtggatcttccagttcctacagacttt
ctttctgtctccaatgatgtgaaaccaaagttaatgactccagatgctttcatgactcct
agcacttcacttcaacagatctctgtgtcaccgggaagcagtgtaagcactttgactgca
gtgactggtttgagtaacagctctgctaatgagactggatcatcaagacctgctgaagac
ttgtgtctaagcccaaaggtcacattggaaaatgtcaatctcagtaataacacaagtaat
actgtccaagctagtcccagaaacaactctgtgcaacttattccagggctctctgagcag
ctatctacaaaacctctccaggttgttggtgctaactcttcgcttcctttggagcttcag
tctgtggatcctctttgtgtgcctcagagttccccaacgcgggaacgttctcctgatgtc
atctcctcagcctccacagcattgtcgcaggacattcctgaaattgcctcagaaaccctc
cagcgtgcattttcaagctctgtactacccactgaagtcctggaacctacccatcatatg
gacagcatggcttcagctgcctctgcactgcatctgttatccccaagaagtagacctaac
tcagaacatagtcatcactctctagatatgcctcaggtggaggtggagcggctgagtact
ccgtcactcttagaaactgttttatctcaagagaatacagcagcagacaatgttgttagc
caaccttggccagcagcacctgacattacccgtgaaactcgtaatagcatcaatgagagt
tccagagaagatatgcaggagaaacataagaactcggcctttcacaggcatccataccag
ttgcaccagcatgatagccaggatgcgagtgctgaacagagtgaccatgatgatgaagta
gcaagtcttgcttccacatcatgtagctttggttcaaagtcagcttctcatagacttcca
gttaaagattggaaatcaaagacatcgcctcgatcttctcccaaactgagaagaaagagt
aaaaaggacgatggggagacagcacaatccccacggttagaacaacagcagcagttcaac
acagaccaggaagagttgctgtctctgttacggagccaacagagggagctctctgaattg
cgccagagccaactggagctaatgcagaggctgacagatcatatggatgcagtgcagggc
tccattatgggtcatgtggaacggattatggtcacacaacaagaacaagaacagagacga
atggataggatcttggcagaagggcatgaaagaaatgggcagtttcaggaacaactttct
caccaactctctcaaaatttggcaaattctatcagtaatcgtatagagaagactgttcga
gatgagatgaagaaaactttaccacaatctatttccaaaagtttggaaccagtgtcgggt
cagctgaataaccatattgcaaccaaacttgcagcaattgaaggaatattaaaagagaat
ataacaaaaatggtaaaatcaaagaacactgtggagagtattggaagagctgcagcagat
gccttgcaaggaccgatacaatcaagttacagagaatcgttccagagtatagttgtacct
gtgtttgaaaaagcctgccagtcaatgttccagcaaataaatgacagcttcaagcagggg
acacaagaatatatccaacaacttgagattcaccttcagtccaaaaagacccaagaacaa
gaaatccgtgatcctctgattagtcagttgcagcaaatgattgatcgcttccagagtgtc
actgatcacctggctgctaccatcacaaatggcatgcgttcagaagtgcaacatcaactt
cacatcattgtcagcaacttacaggaatcgattctgactcaagtgcagagaattgtgaaa
ggtgaagttagcctagcaatgaaggagcaacaggctgttgttacatctagtatcatgcag
gccatgcgatcagctgcagggacacccattccaacaactcatatggatttccaatcccag
caggcccacatcttgcagctgttgcaacaggggcaacttaaccaagccttccaacaggct
ttgactgcagcagatctcaatctggtgctttatgtctgtgaaactgtggattctcaactt
gtctttggccagcatccttgtcccctgacccagccggttttgctttcacttattcaacaa
ctttccaccgatctcaattcacgcacagaactaaaactgagttacctggaagatgcagta
atgaatctagatcacacagacccagttgctagggatcacatgggttctgtattgaatcaa
gtcagacagaaactgtaccagttcaaccaggcagaacctcacagtaatttgagcaaaagg
gctcggagacttatgatgatgcttcaaggactagtgactccgctgagttaa
DBGET
integrated database retrieval system
