Hemiscyllium ocellatum (epaulette shark): 132823989
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Entry
132823989 CDS
T09720
Symbol
nlrc5
Name
(RefSeq) NLR family, CARD domain containing 5 isoform X1
KO
K22615
NLR family CARD domain containing 5
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hoc04054
]
132823989 (nlrc5)
Pattern recognition receptors [BR:
hoc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
132823989 (nlrc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
LRR_4
NLRC4_HD2
LRR_8
LRR_At5g56370
Atypical_Card
NOD2_WH
LRR_NXF1-5
CARD
AAA
Dark_CARD
nSTAND3
AAA_30
AAA_7
Helicase_IV_N
Motif
Other DBs
NCBI-GeneID:
132823989
NCBI-ProteinID:
XP_060694174
LinkDB
All DBs
Position
17:complement(56580240..56755575)
Genome browser
AA seq
2059 aa
AA seq
DB search
MLLCFSFGVDGVKAHVARGDSGLCWGQQLDGESLVTGMSTSGIKEVLESNYGQIVECLSP
KADHVLEEAKGILSKKELDLIMSKRTNVEKVSILLNKLMTKDNETCKKFFETLIIRIQDD
IFPMRLENLFMAAEDHEVLWSRELSESNSSGDANSEAELVAADKPQTGRKRKAAKVANQK
STKVKRVRKANSCQAREVNSSSTAPFTESQEVDMSFQAGEEYLNLPAMSDFAEDYKSLMV
KCVSEKYEANMAKEDQMKQVIIDQTFRSLTMKDGNVAKLKERIDASRDDVLSSPGLEENQ
DTVANLTEFLSKKHVSNCRVHILLGKAGTGKTKLMHKVCYEWARGTLSQFQYVFLFEFRQ
LNLINKSIDLKSMLFDLFLQPQRNSHAVFRFIIGNPEKILILFDGFDEFVGKASVHTAPV
SNDPMAPLSVGQLFSSLYNGKLLPGSTILITSRPKDVLSLPLDVVGQVGEVSGFNQSKIE
EYARRFFRDSKQNHQAICHLQKNRKILNMCYIPALCWIVFLCLERLLTPRTAEPKLPHTM
TQFYIKMLTVFLSKGTTSKRARANAETRLLNKHREDIHGLCELAIKGLQESKSVFYLRDL
LSEKIIDFASLYGFLTTFEVKTIDQNQENGHAFIHLTLQEFLAALHQMIDNTISDQVLKR
TFSLKSKWTSKNDLRNEFTAAVHVFLSGLASKGCKQFLSTLANKNEAWVQMKQKAILQNL
QKLATTNLTGPKIIELCHCVYETQDCDLAQEVAAQLKSKFELRNFRLTPADMTVLTFVIN
SGASCISLDIGGCAMDLECVAILGTCKNIEVLVFKSRKYEDRFAGTLSEIIPKVSSLKKL
ILTSCSISVMGITPLASALKISHHLEEINLQDNELGDAGITVLVDVLPEMGSLRKIELGD
NNITVDGILRIANTINTCSNILDIHVSDGGNVATIRFFSRSTSNPINSSLSPLMECEGSH
ETLLRKLSLVSCRLAAQHVHALGEILQRCPLLECLDLSGNELKDHGLRRLVDILQDCHIF
KLINLSNNSISEDGVLCLASVLKKCPWMSAVEVSLKHNQTVLLKFSEQNKDTEVRDELNP
QPMVFKLSGTGDSKIVPAPLKKLSLTNCCFQLKHLEELGSSLENCNDLAELDLSNNALGD
GGIEMFVKLLPKLQVSRLINISNNFISLAGVLCLAGCLNRVRNITEVEVSLGKSGKGLIK
FHGKCRLQRVNEFQESALSFETQHGKQDISVSKKIRLEDCKTDVETMGNLCLILEQCSGL
TELDLSNNALSDDVITELLNHLPNLRDLKILTITDNIISPEAILLLANSLNICENVLKVE
VRASGRASIRLEKKVYSLEGNGKKPDPFPSQILSLKECNLDRKSVESLFKILKHSKDLTE
LDLSCNLLGDEGVRYLRDSLPKLQVLKVIDVSNNRISPAGVLYLVESLHTCSNVTEVEVS
LASPGRSLIKLARRYEKKVCSVKECKFKEKELFKLFSIIKQCTHLTELNLTCNMMGDEGL
RSLIEVVTNLKDLKELNLQRNGISLAAMENLLETCMVCPKALTVRFEEQWITGEDAANLL
QCICTHLNVADIGVKKNTVSIRLVEEGWRLADDDSTRLDPGAQHPSLQSISLYECGIEAP
QLLRLAPIIKQCSGLEELHLFRNEIGNKGAEILAAILPVFQRLKKLSLEAININSQGIVT
LAASLCKCRNIKEINLSQNELGEEGATELGKILPRLEQLKKINFSGTSTAAGLVGTNRLV
TGLSNCTILEEINLDSLTLSDSGAQLLADRMLKMAGLKKLNLRSNSIGWKGAAHLASGLK
SCPAIVEIDLCGNTIEDLGVMKLADVLPVMKHLKILNLTQNSITATGGERLAQALKQCPS
VEEIHLSTNKIGDQTAKKLSEALPKLPCLKTLNLHSTELTSDGGEILAQHLALCSSIEVI
SLPENHFGNKGVMELAMALQKMTSLKTLDLRLNRFDDRVAAELTAGLVCCPRIEEVILSW
NDIGDEGAVRLADALPRMLCLKKLDLEGNKITAAGAEKLAASLHQCSFVEVIRLWKNNIS
KDREHSLQEQDSRLNFLSV
NT seq
6180 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtgtttcagtttcggtgtggatggagttaaggctcatgttgctagaggggac
tccggcctgtgttgggggcagcaattggatggggagtcgctggtgacagggatgagcacc
agtggaattaaggaagtgttggagagtaactatggtcaaatagtggaatgcctcagtccg
aaagctgaccacgttcttgaagaggctaagggcatccttagtaagaaggaactggatctg
atcatgagcaaaagaacaaatgtggaaaaggtttcaatactgctaaacaaattgatgacc
aaagataatgagacctgcaagaaattctttgaaactctcattatcaggatacaggatgac
atatttcccatgcgcctggagaatttgtttatggcagctgaagatcatgaagttttgtgg
tcacgggagctgagtgaatcaaattccagtggtgacgcaaactctgaagcagaattagtt
gcagcagataaaccacagactggaagaaaacgtaaagcagcaaaagtggcaaaccagaaa
tctaccaaagtaaaacgagtgagaaaagcaaattcttgccaagctagagaagtaaattcc
agttctacagctcccttcacagagtctcaagaagtggacatgtcatttcaagcaggagag
gagtatttgaatttgccagcaatgtcagactttgcagaagattacaaatcgttaatggta
aagtgtgtctctgagaagtatgaggccaatatggcgaaagaagaccaaatgaaacaagta
atcattgaccagacgtttaggagtctgaccatgaaagatggaaatgtggccaaactgaag
gagagaatcgatgctagccgcgatgatgtactcagttcaccagggcttgaagagaatcag
gacacagttgcaaacctaacagagttcctgagcaaaaaacacgtctccaactgtagagtg
cacatcctacttggaaaagcaggaactggaaagacaaagttgatgcacaaagtttgctac
gagtgggcacgagggactctcagtcagttccagtatgtatttttatttgagtttcgccaa
ctcaatctgatcaataagagcatagatctgaagagtatgctgtttgacttgttccttcag
ccacaaaggaactcccatgctgtatttcgattcatcataggaaatccagagaagatatta
atcctgtttgatggcttcgatgagtttgtggggaaggcctctgtccacaccgcccctgtt
tccaatgaccccatggctccactgtcagtgggacagttattttccagcctgtataacggc
aaactgctcccaggctctacgatcctaataacgtccagaccaaaagacgtcctctccttg
cctttagatgtggtgggtcaagtgggagaagtctcagggttcaaccaaagtaaaatcgaa
gagtatgcacgtcgatttttcagagacagtaaacaaaatcatcaagcaatctgccacttg
cagaagaataggaagattttaaacatgtgctacattcctgccttgtgctggatagttttt
ctctgtcttgagcgcttgttaactcctcgaactgcagaacccaagctacctcatacaatg
acacagttctacatcaagatgctcaccgtatttttaagcaagggtaccactagtaagcgg
gctagagctaatgctgaaacacggttactaaacaaacacagagaagatattcatggactt
tgcgaacttgcaataaaagggctgcaagagagtaaatctgtattttatttgcgagacctc
ctttctgaaaaaatcattgactttgcttctttgtatggatttcttaccacttttgaagtg
aagacaatagatcagaaccaggagaatggacatgcctttatccacctgaccctgcaggag
ttcctggcagcacttcaccagatgattgacaacaccatttctgaccaggtgctaaaacgc
acgttttccctcaagtcaaaatggacatcaaagaatgacctgagaaatgagttcaccgca
gccgttcatgtatttttatccgggttagcgtcgaagggatgtaagcagttcctcagtaca
ttagcaaacaagaatgaagcatgggtgcaaatgaagcaaaaggcaattttacagaacttg
caaaagttggcaaccacaaacctaactgggccaaaaataatcgagttgtgtcactgtgtg
tatgaaacacaagactgtgaccttgcgcaggaagttgcagcacagttaaagtccaagttt
gagcttcgaaacttcaggcttactcccgcagatatgactgttctgacatttgtgataaat
agtggagccagctgcatctctctggatattggaggctgtgccatggatcttgaatgtgtc
gccattctaggaacttgcaagaacatagaagttctagttttcaaaagcagaaagtatgag
gacaggtttgctggaacgctatctgaaatcattcctaaagtcagcagcttaaagaagctg
atccttacatcctgtagtattagtgtgatgggtattacccccttggcttctgcactgaaa
atctctcatcacttggaagaaataaacttgcaagataatgaactcggagatgctggcatt
actgtacttgttgacgtgcttcctgaaatgggaagtctgagaaaaattgaattaggtgac
aataatatcactgtagatggaattcttagaatagcaaacactataaacacctgttcaaat
atcctggatatccatgtcagtgatggtgggaatgttgcaacaattcgatttttctcccgc
tcaaccagcaacccaattaacagctctttatcacctttgatggaatgtgaaggcagccac
gagacactactcaggaagctaagccttgtgagctgcagattagcagcacagcatgtacat
gccctcggtgaaatcctacagcgttgccccttgctggaatgtctggacttgtctggcaat
gaactgaaagaccatgggctaagaagacttgttgatatcctccaagattgtcatattttc
aaactgattaacctcagcaacaacagcatctcagaagatggggttctttgcttggcctca
gtactgaagaaatgcccctggatgtctgcggtcgaagtgagcctgaaacacaaccagaca
gtgttacttaaattttcagaacaaaacaaggacactgaagtgagagatgaactgaatccc
cagccgatggtgtttaaattgagtggcactggagattcaaagatcgtgcctgcgccactg
aagaaactaagtctgaccaactgctgctttcaactgaagcatttggaagaattgggctct
tcactagagaactgcaatgatctagcagagttggacttatcaaataatgcacttggagat
ggaggaattgaaatgtttgtcaagctcttaccaaagctgcaggtttcaagactaatcaac
atcagcaataatttcatctcgttggctggagttctgtgcttggctgggtgtctgaaccgt
gtcagaaacataacggaggtggaagtgagtctggggaagagtggaaaaggattaattaag
ttccatgggaaatgcagacttcaaagggtaaacgaattccaagaatcagcattgtcattt
gaaacacaacatggaaaacaagatatatctgtgtcaaaaaaaattagacttgaagattgt
aaaacggatgttgaaactatgggaaacctctgtttgatacttgaacagtgttctggactt
acagagcttgacttgtcaaataatgcactgagtgacgacgtcatcacagaactactgaat
catctgccaaaccttcgtgacttgaagattttgaccattacagataacattatttcaccg
gaggctatccttttgctggctaattctctgaacatctgtgaaaatgtgttgaaagtagaa
gtcagagcaagtgggagagcctcaataagacttgagaagaaagtttacagtcttgaagga
aatgggaagaaaccagatccctttccctcacagattctcagtctgaaggagtgtaacctg
gacaggaagagtgtagaaagtctattcaagattctcaaacacagcaaagacctgactgag
ctggacctgtcctgcaatttactaggagatgagggagtgcggtatttgcgggattcctta
ccaaagctgcaagttttaaaagtaatcgatgttagcaacaacaggatctccccagctggt
gttctgtacctggtggaatctctgcatacctgcagcaatgtgacagaggttgaagtgagt
ttggcttcacctggaagatccctaataaagcttgcgaggagatatgaaaagaaagtgtgc
agtgtgaaggagtgtaaatttaaagagaaggagctcttcaaattattctccattattaaa
cagtgcacccatctgacagaactgaacctgacctgcaacatgatgggggacgaaggtcta
cgcagtttgatagaagttgtgaccaatctcaaagacttaaaggaactcaacctacagagg
aatggaatttctcttgctgcaatggagaatctcttggagacatgtatggtttgtcctaaa
gcattaacagtcaggtttgaagaacagtggattactggtgaagatgctgccaatcttcta
caatgtatctgtactcatctgaatgtcgcggacattggtgtgaagaagaatacggtttca
ataagactagttgaagagggttggcgacttgctgatgatgacagcaccagattagaccct
ggagcacagcatccatctttacaatccatcagtttgtacgagtgtggaattgaggctccg
cagctccttcgcctcgcacccataattaaacagtgttcaggcctggaggagctccattta
tttcgaaacgaaatcggcaacaaaggagcggaaatactggctgcgatccttcctgtgttc
cagaggctgaagaagctgagcctcgaagccatcaacatcaactctcaggggatagtgacc
ctcgcagcaagtctctgcaaatgtcgcaacatcaaagagatcaacttgtcacaaaacgaa
ctgggagaggagggagcaaccgaactggggaaaatcctacctaggctggaacagctgaag
aaaatcaacttctctggaacttctacagctgcaggtttggtcggaacgaatagactggtc
acgggactcagtaactgcacgatactggaggagatcaatttggattcgttgacactgagc
gacagcggggcacagctgttagccgacaggatgctaaagatggccgggctgaagaaacta
aatttgaggtcaaattccattggttggaaaggggcagcccatctggcgagtggactgaaa
agctgtcctgcaattgtggaaatcgacttatgtggcaacaccatcgaagatctgggagtg
atgaaacttgctgatgtccttcctgtgatgaagcatttgaagatattgaacttgactcag
aacagcatcacagcgaccggtggggagaggttggcacaagctctcaaacagtgcccatcg
gtggaagagattcacttgtccacaaacaagattggcgatcagactgcaaagaaattgtca
gaagccctgcccaagctgccctgtttaaagactttaaacctccattccactgagctcact
tctgatggtggagagatcctggcacaacatcttgcactgtgctcaagtatcgaagtaata
agtttacctgaaaaccactttgggaacaaaggagtgatggagctcgcaatggctctacaa
aagatgacatctttaaaaacgctggacctgcggctgaacaggtttgatgaccgtgttgca
gcggagctcacagctggacttgtgtgctgtccccgtattgaagaggtcatcctatcttgg
aatgatattggcgacgagggtgcagtgaggctggctgatgccctaccaagaatgctgtgc
ttgaagaaacttgatttggaaggaaacaaaatcacagcagctggagcagaaaagctagca
gcaagtctccatcaatgctcctttgttgaggtaattcgattgtggaagaacaatatatcg
aaggacagggaacatagtcttcaggaacaggattccagattaaatttcctctccgtttag
DBGET
integrated database retrieval system
