Hemiscyllium ocellatum (epaulette shark): 132824010
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Entry
132824010 CDS
T09720
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hoc04812
]
132824010 (katnb1)
Cytoskeleton proteins [BR:
hoc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
132824010 (katnb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Katanin_con80
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_RFWD3
eIF2A
Beta-prop_HPS5
Beta-prop_WDR19_1st
WDR54
Beta-prop_RIG_1st
Beta-prop_LRRK2
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_NWD2_C
Beta-prop_VPS8
Cytochrom_D1
Ge1_WD40
VPS8_N
Motif
Other DBs
NCBI-GeneID:
132824010
NCBI-ProteinID:
XP_060694215
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Position
17:complement(62169505..62248437)
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AA seq
657 aa
AA seq
DB search
MAALGATKITWKLQEFVAHAGNVTCLVLGKNSGRLLATGGEDCRVNLWSVSKPNCIMSLT
GHNTPVECIQFKDSEELVVAGSQSGSLRIWDLEAAKILRTLSGHKANICSLDFHPFGEFV
ASGSMDTNVKLWDIRRKGCVMTYKGHTNAVRCLRFSPDGRWIASAGDDNTVKLWDLSAAK
ILTEFTDHTGPVNIVEFHPNEYLLASGSSDRTIKFWDLEKFKMVSCTEVESTPVRCILFN
PDGCCLYSGSHDSMHVYGWEPPRCFDVLQVNWGRAADLAICSNQLIGASFSQVTVSTFVV
DLNRVKKTGSIVQGVVEDEKLYNLPVTKGAVLRRNYERPLTTCSRPQSKVKEEPESEGRI
PSGEEEKDDKESTAEIRNPEEYKEIFQPQNAIARTPPRRTDPFPAPPEDDTVTVKEAEKV
IAPTEVHSPVLQRMQAEQLNFSPTVASTPINQPEAPIIPIAKNEPIGLKVADFLPPQNNK
LADLSDEDAVSQIRKGHDTMCVVLTSRFKNLDTVRAVWTTGDVKTSIDSAVTMNDLAVIV
DILNIINLKPALWKLDLCPSIIPQIDKLLQSKYESYVQTGYTSLKLILQRFGPLMADNLV
TPPSIGVDITREERHQKCKLCYKQLKNLLPILQSKAGLPGRQGSAFRELQLLMAAFE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttgggggcaacgaaaatcacctggaaactgcaggagtttgttgctcatgct
ggtaatgtaacctgtttggtactgggcaagaattcaggcaggctattggctactggtgga
gaggactgtcgagtcaatttgtggtcggttagcaaacctaactgtattatgagtcttaca
ggccacaacacaccagtcgagtgtattcaatttaaagattctgaggagttggttgttgca
ggctcacaatccggatcactaagaatatgggatttggaagcagcaaagattcttcggaca
ctgtcgggacacaaagcgaacatctgcagtttagactttcatccttttggggagtttgtg
gcctctggttctatggacaccaatgtaaagttgtgggacattcgaagaaaaggttgtgta
atgacctacaagggtcacacaaatgctgtgcgttgtttaagattcagccctgatgggcgt
tggattgcgtctgcgggggatgataacacggtcaagctgtgggatttgtcagcggcaaaa
attctaacagagttcacagatcacaccggacctgtaaacattgtggagttccaccccaat
gaatatctgctggcttcaggaagctcagacagaacgataaagttttgggatctagaaaag
tttaaaatggtgagctgcacggaagtggagagcactcctgtcaggtgcatcttattcaac
ccagatgggtgttgtctctatagtggttctcatgattctatgcatgtttatggctgggaa
cctccccgctgttttgatgtactgcaagttaactggggtagagcagcagaccttgccatc
tgttccaatcaattgattggagcttcattcagtcaggtgacagtctcaacatttgtagtg
gatctgaatcgtgtgaagaagactggttctattgtccaaggtgtagttgaggatgaaaaa
ctgtacaatctaccagtgaccaaaggagcagtgctcagacgcaactatgagagaccacta
actacctgcagtaggccacaaagtaaagtgaaggaggagccagagagtgaagggcgcatt
ccaagtggggaagaggagaaggatgacaaagaatcaacagcagaaattcgaaatccagag
gaatacaaggagatctttcaaccacaaaatgccattgcccggactccacctcggaggact
gatccctttcctgcacctccagaagatgatactgttacagtgaaagaagctgagaaagtg
attgctccaacagaagtgcattctcctgtgctgcaaagaatgcaggcagagcagctgaac
ttttccccaacagtggcctccactcccatcaatcagcctgaagcaccgataatcccaatt
gctaaaaatgagcccattggattgaaggtggcagactttctcccacctcagaataataaa
ctggctgatttgagtgatgaagatgctgtgagccaaatccggaaagggcatgacactatg
tgcgtggtattaacaagtcgatttaagaacctagacactgtgagagctgtatggaccact
ggtgatgtcaagacctccatagactcagcagtgaccatgaatgacttggcagttattgtg
gacatcctgaacattataaatctcaaaccagcgttgtggaaactggacctgtgcccttca
atcattcctcagattgacaaactgttgcagagcaaatatgagagctatgtgcagactggt
tatacttcccttaaattgatcctgcagcgatttggacccttaatggcagacaatctagtg
acaccaccctctattggggttgacataacacgtgaagaaaggcaccagaaatgtaagctg
tgttataagcagttaaaaaacttgctcccaattcttcaaagtaaagcaggactgcctggc
cgtcaaggcagtgcttttcgtgaactgcagcttctgatggcagcttttgaatga
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