Hemiscyllium ocellatum (epaulette shark): 132824027
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Entry
132824027 CDS
T09720
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132824027 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132824027 (sf3b3)
03041 Spliceosome [BR:
hoc03041
]
132824027 (sf3b3)
03036 Chromosome and associated proteins [BR:
hoc03036
]
132824027 (sf3b3)
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
132824027 (sf3b3)
Spliceosome [BR:
hoc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
132824027 (sf3b3)
Complex B
132824027 (sf3b3)
Complex C
U2 SnRNP specific factors
132824027 (sf3b3)
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
132824027 (sf3b3)
TFTC complex
132824027 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
132824027
NCBI-ProteinID:
XP_060694259
LinkDB
All DBs
Position
17:complement(68597791..68653175)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEAFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNIFDKVHQETFGKSGCRRIVPGQY
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADSDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVSTAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILTCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSTDVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAEKQDELGEKGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP
LQYTPRKFVIHPESNNIIAIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGSPKAGSGQWASVVRIMNPIQGNVYDQIQLEQNEAAFSIAVCKFGNGG
DDWYVLVGVGKDLILNPRSVGGGYIYTYKLINSGEKLEFVHKTSIEDVPTAIAPFQGRVL
VGLGKLLRIYDLGKKKLLRKCENKHIPNFIVAIHTIGHRVIVSDVQESFFWIRYKRNENQ
LIIFADDTLPRWITTACLLDYETMAGADKFGNISVVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEIIVNYHVGESVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEHPPLCGRDHLSFRCYYFPVKNVIDGDLCEQFNSMDPIKQKSVAEELDRT
PAEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgtataacctgactctccagagagcaactggcatatcacatgccattcatgga
aacttttcaggcaccaaaatgcaggagattgttgtgtctaggggaaagatcttggagttg
ctccgtccagatgcaaataccggaaaagtacatacgttgctgacagtggaggcctttgga
ataattcgttctttgatggccttccgtttaactggaggcaccaaagattacatagtagtg
ggtagtgactctggtaggattgttatcctggagtaccaaccatccaagaatatttttgat
aaggtccatcaagaaacctttgggaagagcggatgtcggcgtattgtacctggacagtac
ctggcagttgacccaaaaggtcgtgctgttatgattggtgctattgagaagcaaaagttg
gtctacattctgaacagggatgctgctgctcgcctcaccatctcctcccctctagaagcg
cacaaagcaaatacgttggtgtatcatgtcgttggtgtggatgtggggtttgaaaatcct
atgtttgcttgtcttgagatggactatgaggaggcagacagtgatcctactggtgaagca
gctgctaacactcaacagacattgacattctacgagttggatctgggtctgaaccatgtt
gtgagaaagtacagtgaacctctggaggagcatggcaacttcctaattacagttccagga
ggctcagatgggccgagtggtgtactaatctgttccgaaaactatatcacttataaaaac
tttggagaccagccagacatccgatgccccatccccaggaggaggaatgacctggatgat
cctgaacggggaatgatttttgtctgctctgctacgcataaaacaaagtccatgttcttc
ttcctggcacagactgaacaaggtgacatcttcaaaattacactggaaacagatgaggac
atggtgactgaaatcaggttgaagtattttgacactgtccctgtgtcaactgccatgtgt
gtactgaagactgggttcctctttgtcgcatcagaatttggcaatcattacctttatcag
attgcacatctcggagatgatgatgatgaaccagagttctcttcagcaatgcccttagag
gagggagatacatttttctttcagccacgacctctcaagaatctggtattggtggatgag
ttggacagcctttcaccaattttaacatgccagattgctgatctggctaatgaagacaca
cctcagctatatgttgcctgtgggagagggccgcggtcgtcattgagagtcttgagacat
ggtcttgaggtatcagaaatggctgtttcagagctgcccggtaacccaaatgctgtatgg
actgtgagaagacatgtggaagatgagtatgatgcatacatcattgtgtctttcgtgaac
gccacgctggtactgtctattggtgaaaccgtagaggaagtgacagactctggatttctg
ggtacaacccccacactgtcctgttccttgcttggtgaggatgcactggtccaggtgtat
cctgatgggatccgtcatatccgtgctgataagagagtcaatgagtggaagacccctggt
aaaaagacaattgtgaaatgtgctgtgaatcagcgccaggtggtgattgctctgacaggc
ggagaactggtctactttgagatggatccgtctggacaactgaatgagtacactgaacgg
aaagagatgtcaactgatgtggtctgcatgagtttagcaaatgtacctccaggggagcag
cgttctcgatttctggctgttgggctcgtagacaacactgtcagaatcatttctctggac
ccttcggactgcctgcagcctctcagtatgcaagctcttcctgcacagcctgaatctctc
tgtatagttgagatggggggtgcagagaaacaggatgaactgggagaaaagggttccatc
ggttttttgtacttaaacattggtctacagaacggagtgttattaaggacagtattggac
ccagtcactggagacttgtcagatacaaggacccggtatctcggatcacgacctgtcaag
cttttcagggttaggatgcagggacaagaagcggttttggccatgtcgagtaggtcctgg
ttgagctactcataccagtctcgtttccacctgacacctctgtcctatgaaactctcgag
tatgcgtctggctttgcctcagagcagtgtcctgagggtattgtggcaatctccaccaac
acattgagaatcttagcccttgagaagctgggagcggtattcaatcaagtttccttccct
ctgcagtataccccaaggaagtttgttattcacccagaaagcaacaacatcatcgccatt
gagactgatcataacgcctacacagaagccaccaaagcccagcgcaaacagcagatggct
gaggaaatggtggaagcagctggagaggacgagcgagaattggcagcagagatggcagct
gccttcttgaacgagaacttgcctgaatccatttttggatccccaaaggcagggagtggg
caatgggcatccgttgttcgaataatgaaccccatccaaggcaatgtgtatgatcagatc
cagttggaacaaaacgaagcagccttcagtattgctgtttgtaagtttgggaatggtggt
gatgattggtacgtgctggtaggggttggcaaggacctaattctcaatcctcgctcggtt
ggaggcggatatatttacacctacaaacttataaacagcggagagaagctagaattcgtg
cacaagacatccattgaagatgttccaacagccattgccccttttcaaggccgtgttctg
gttggattggggaaactcctgcgcatctatgatctagggaagaagaagctgctgaggaaa
tgtgaaaataagcatattccaaatttcatagtggcgatccacaccattggacacagagtc
attgtctccgatgtacaggagagcttcttctggattcgttacaaacgcaatgagaaccag
ctgattattttcgctgatgacacattaccccgctggatcaccacagcttgtctgctggac
tatgaaacaatggctggtgctgataaatttggcaatatcagtgtggtgagattgcctcca
aacacaagtgatgatgttgatgaggatcccactgggaacaaagcattgtgggatagaggt
ctacttaatggagcttcccagaaggcagagatcattgttaattatcatgtgggagagtca
gtcctttcattacagaagaccacgttaattcctggtggttcagaatcacttgtgtacaca
accttgtctggaggcattgggatcctagttccattcacatcacatgaggaccatgatttc
ttccaacacctggagatgcacatgagatcagaacaccctccgttgtgtggtcgtgaccac
cttagtttccgctgttattacttcccagtgaagaatgtaattgatggcgacctgtgtgaa
cagttcaactcaatggatcccataaaacagaagagtgtggcagaggaactggacagaaca
cctgctgaggtgtccaaaaaactggaagacatccgaacacgttatgcattttag
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integrated database retrieval system
