Hemiscyllium ocellatum (epaulette shark): 132824250
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Entry
132824250 CDS
T09720
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132824250 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132824250 (cstf3)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
132824250 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_19
TPR_16
TPR_6
Motif
Other DBs
NCBI-GeneID:
132824250
NCBI-ProteinID:
XP_060694555
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Position
18:complement(60393652..60509447)
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AA seq
718 aa
AA seq
DB search
MSGEGNAEQAPEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVTQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLAYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEESINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRSIFKKAREDPRTRHHVYVSAALMEY
YCSKDKAVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFAAFKEEYEGKETALLVDRYKFMDLFPCSNSE
LKALGYKDVSRNKLTAIIPDPIVTPSAVTVLKDEVDRKPEYPKPDTNQMIPFQPRHLAPP
GLHPVPGGVFPVPPASVLLMKLLPPPTCFQGPFVQVDELIEVLRRCQLPDTVEQAIELIT
GGQPEMVIEGNGPIENDAVMKKPLKRAANEDSDEEEEKGAVAPPVHDIYRARQQKRVR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgaaggaaatgcggagcaggctccagagtatgttcctgaaaaagtgaagaag
gcagaaaagaaattagaagaaaatccatatgaccttgatgcatggagcattctcatacga
gaggcacagaaccaacccatagacaaagcgcggaagacctatgagcgacttgttacccag
ttcccgagctctggcagattctggaaactatacattgaagctgagataaaagcaaaaaac
tatgataaagttgaaaagttgtttcagcgatgtcttatgaaagttttgcatattgatctg
tggaaatgttatttggcctatgtgagggaaacaaaaggcaaacttccaagttacaaagag
aagatggcccaagcatacgactttgctttagataaaatcggcatggagattatgtcttat
caaatttgggttgattacattaacttcttaaaaggagtggaagctgtgggatcctatgca
gagaatcaaagaataacagcagttcgacgagtgtatcagcgaggctgtgtcaatcctatg
ataaatattgagcagttatggcgagattataataaatatgaagagagcatcaatattcac
cttgctaagaaaatgattgaagatcgtagcagagattacatgaatgctcggcgagtggca
aaagaatatgagactgtaatgaaaggtctagaccgtaatgcaccatcagtcccaccacag
aacagcccgcaggaagcacaacaggttgacatgtggaagaaatatatccagtgggaaaag
agtaacccacttcgcacagaagaccaaacgctaatcactaaacgagttatgtttgcctac
gaacaatgtctgctggttttaggacatcatcctgatatctggtacgaagccgcccagtac
ttggaacaatcgagcaaattgctggcagaaaaaggggacatgaataatgcaaaactgttc
agtgatgaggctgcaaacatctatgaaagggcaatcagcactttgttaaagaagaacatg
ctgctttactttgcttatgcagactacgaagaaagtcggatgaaatatgagaaggtacat
agcatatacaataggctattggctatcgaagatatcgatccaacattggtttacatccag
tacatgaaatttgcacgaagagctgagggtattaagtctggtcgatccatatttaaaaaa
gcaagggaagatcccagaacgcgccatcatgtctatgtctctgctgcactgatggaatat
tattgcagtaaggacaaggcagtagccttcaagatatttgagctgggattaaagaagtat
ggagatattccagaatacatattggcttacattgactatctttctcatcttaatgaggac
aataataccagagttttgtttgaacgtgtgctgacatctggatccttaccacctgagaaa
tctggagagatctgggcacggtttctggctttcgaaagcaacattggagatctggccagt
atcctgaaagtggaaaagaggaggtttgctgcttttaaggaggaatatgaaggaaaggaa
acagccttactagtggacagatacaagttcatggacctgtttccttgttccaatagtgaa
cttaaagctcttggatataaggatgtttctcgaaacaaactgactgccataattccagac
cccatagtgaccccttcagctgtaactgtactgaaggatgaggttgatcggaaaccagaa
tatccaaagcctgatacaaaccagatgataccgttccaacccagacacttagcacctcct
ggcctccatcctgttcctggaggagtctttcctgtacctccagcttctgtgctacttatg
aaactgctaccacctccaacttgtttccaggggccatttgttcaggttgatgaactaatt
gaagttttaagacgctgtcagttaccagatactgttgaacaagctatcgagctgatcact
ggaggccagcctgaaatggttattgaaggaaatggacctatagaaaatgatgctgtgatg
aaaaagccccttaaaagggcagcaaatgaggattctgatgaagaggaggagaaaggagct
gtggcacctcctgtgcatgacatttacagagcacggcaacagaaacgggtccgatag
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