Hemiscyllium ocellatum (epaulette shark): 132824347
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Entry
132824347 CDS
T09720
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132824347 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132824347 (nup160)
03036 Chromosome and associated proteins [BR:
hoc03036
]
132824347 (nup160)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132824347 (nup160)
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
132824347 (nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
132824347
NCBI-ProteinID:
XP_060694690
LinkDB
All DBs
Position
18:complement(14239565..14315464)
Genome browser
AA seq
1397 aa
AA seq
DB search
MAAVWERSLLEIGEWEREREEWREIRAELGVNAIPGVKYSDSAGGFFYEDSGRLQSVTRS
RFIHWTTSGDTLQLTEQSLDCNLLNNTVRIKFLNCHVLPGGVHVHETHDRVTLLILTNQT
VHRIVLPHPSRMYRSELITDGHIQSIFTDIGKLNLRDPANSFLIPGVQGHSTNSTASATW
LNSDGDALFALASLSGGILIIQLPEQDTAGNPVLLELKHSSVMQRLLTGWMPTAIRGDQG
PSDLPVSLAVQLLEHDAFIFALCQDHKLRLWSFKDQLCLMVADLLVFVPVNKELRHTASL
GHKLRLAYSSSGFFLAVYLHCPKRGQFCVFQLVSCIESNRYSLDHISTLFFTQETLVDFA
LTPTDIWALWQDEDNQANVRYISFEHNNAGQWNPVFTQPVADEELHIPEDQDPKEAYLEY
LFAPGRFTAQALLKALQIYCRGADRIVDPTVDGLKKEVTLAVENAIKSSVTEYEFSQEVY
RQLQVEFWSKFYACCLQYQEALARPLALLVNARTNMVCLLKKGFLSFFFPCFAIDHLYMS
SDECLFLEDECSLTDDPDVARDLHRLVQCLRLVGDAITLEMASLMETAVSHLHPPEKAAE
QILEFLLARDTETHMELQSKLQDIGNPGNIIQLLLREMDQEGDLDTGDVQPLHVRMNMAQ
FFGSNVAINIVCRAVSHISTTRFLICRDLLILEQLMLHLGDSMNLGAGGYLLQLQQDLIP
RTSLLVCSYFVVRWASRSLATAVPIDMLESNLRQLSVLELTDSRDVTSQRPVTGPGTVVE
LFYRTVARKHILSRLLAQANSPLNQPLINYPQVGIALASHLLQYLWANNSSFLFAEFLMG
HCQYVQLQEYVRLLQPWCEVNVGSRRFVLGQCYLVTGEGHKALECFCDAAAAVDREEFLD
RLIQVEDEEAASNPRVQYYNKVLRLLEDMALPALVLQLAAIAVTEARDDWKILAALWTKI
FKHHLDLGHNHQAYESLTQNPDSSRQLDCLRQLVVVLCERSQLQDLVEFPYINLHDEVVA
IIESRARAVDLLTHNYYELLYAFHVQRHNFRKAGTVMFEYGMRLGREVRSLDGLQKQVNC
YLVGINCLRQIRSEYAWIVRPVCGATYERPGASPKRSYDGEPTATPVCHQVDIVELKDLE
KEFVLARTRLLLAKHDPCSAAIAGSASAEEMVALLVQVGLFDAAVSLCQTFRLSLNPIFE
GLSFKCIKLQLIGEAAHSDAWDWLKANQIPSIIATKESSATDEAWRLLSSYLDRYQSPSA
QYHRCVINKLLSHGVPLPNWLINSYKKVDVAGLLRLYLNYDLLEEAVELVLEYVDALMGK
GPQYFNMERSLSATAPAVWLPYTAIDQLLQALGENPGNLNNVRLCEKLRSRLADYHQQVD
QTTLDMNSYRRQQQQLL
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtttgggagcggagtctcctcgagatcggagagtgggaaagagaaagggag
gaatggagagaaataagggccgagctcggtgtgaacgccatcccaggagtgaagtattcg
gatagtgctggaggatttttctatgaagacagtgggaggctgcaatcggtcaccaggagt
cgcttcatacactggaccacgtctggtgacaccttgcagctgacggaacagtccctggac
tgtaacctcctcaacaacactgtccgcatcaagttcctgaattgtcacgtgcttccgggc
ggcgtccatgtacacgagactcatgaccgtgtgaccctgctcattctgaccaaccagact
gtacacaggattgtgctgccacacccctcccgcatgtaccggagtgagctgatcactgac
gggcatatccaatccatcttcactgacattgggaagttaaatctccgtgacccagcaaac
agttttctgattcccggtgtccagggccactcgactaactcgacagcctccgccacttgg
ctgaacagtgatggggatgctctgtttgcactcgcatctttgtctggaggcattctcatt
atccaacttcctgagcaagacactgcaggcaatccggttttactggagctcaaacacagc
tcggtcatgcagcgcttactgaccgggtggatgccgactgccatcagaggtgaccagggc
ccctcggacctgcccgtcagtcttgcagtccagcttttggaacacgatgctttcatcttt
gctctctgtcaggaccacaagctgcgactgtggtcctttaaggatcagctttgcctgatg
gttgcggatttgctggtttttgtgcctgtcaacaaggagctgcgacacaccgccagtctg
ggtcataagctgcgtttggcttactcctcctctgggttcttcttggctgtttacctgcat
tgccccaaacgtggacagttctgtgtcttccagttggtgagctgcattgagagtaaccgc
tacagtctggatcacatctctactctcttcttcacacaggaaacactggtggattttgcc
ctcactcccactgatatctgggctttgtggcaagacgaggataatcaggcgaacgtacga
tacatcagctttgagcataacaacgctgggcagtggaatccggttttcacacagcctgta
gctgatgaagaattacacatcccagaggatcaggacccgaaggaagcctacctggaatac
ctctttgccccaggccggtttacagctcaagccctgctgaaagctctgcagatatattgt
cgaggggcagacagaatcgtggacccaaccgtggacgggctgaagaaggaagtgacgtta
gctgtggaaaatgcgattaagagtagtgtgacggagtacgagttctcgcaggaggtctac
cgtcagctgcaggtggaattctggtccaagttctatgcctgctgcctacagtaccaggag
gccctggcacgacctctcgcattgctcgtcaatgcacgcaccaacatggtgtgtctgctg
aaaaagggctttctgtctttctttttcccctgctttgccattgatcatctctacatgtct
tcagacgagtgtctgtttctggaagacgagtgttccctcacggatgatccagatgtagcg
agggacctgcatcgcttggtgcagtgtctgcggctggtgggagacgccatcactttggaa
atggcctcgttgatggaaacagcagtgagccacctccatcctcctgaaaaggctgcagag
cagatcctcgagttccttctggccagagacactgagacgcatatggagcttcaaagtaaa
ttgcaggatatcggtaacccagggaacataatccagctgctgctgcgggaaatggaccag
gagggtgacctggacacaggcgatgtccagcctctgcacgttcggatgaacatggctcag
ttctttggcagcaacgttgccattaacattgtgtgtcgggcagtgtcccacatatccaca
actcggttcctcatctgccgggacctactgattctggagcagctcatgttgcacctcgga
gatagtatgaatctgggagctggtggctacctcctgcagctccagcaggatctcattcct
cggacctctctcctggtgtgttcctactttgtggtcaggtgggcaagtcggtcgttggca
acagccgtgcctattgacatgctggaatctaatctgcggcagttgtctgtgttggagttg
acggactctcgtgatgtaacatcccaacggccagtcactgggcctggcacggtggtggag
ttgttctatcggactgtggccaggaagcacattctctcccggctgctggcccaggcaaat
agccctttaaaccaaccactgatcaactatccgcaggttgggattgctctcgccagccac
ctcctccaatacttatgggcgaataacagtagctttctgtttgcggagtttctcatggga
cactgccagtacgtgcagctccaggagtacgtgaggttgctgcagccttggtgtgaggtt
aatgtcggctcgcgaagatttgtgctgggccagtgttacctcgttacaggagaaggacac
aaggctctcgagtgtttctgcgatgctgctgcagcggtggacagagaggaattcctggac
agattgatccaagtggaggatgaggaagctgcctccaatccccgggtgcagtactacaat
aaggtcctccgtttactggaagacatggcattgccagcactggtactgcagttggcagca
attgcggtgaccgaggcaagggatgactggaagattttggctgcgctgtggacaaagatt
ttcaagcaccacttggaccttggccacaaccatcaggcttacgagtcactaacccagaac
cctgacagcagcagacagctggactgcctgcgccagctggtggtggttctgtgtgagcgc
tcacagcttcaggatctggtcgaattcccttacatcaaccttcacgatgaggttgttgct
atcatcgagtctcgtgctcgggctgtggatctcctgactcacaactactacgaactgttg
tacgcattccatgtccaacggcataactttcggaaagctggaacggtgatgtttgaatac
ggaatgcgtctggggcgagaggtccgctctttggatggactccaaaagcaagtcaactgt
tacctcgtcgggataaactgcctgcgacaaatccggtcagagtacgcctggatcgtgcgg
cctgtgtgtggagcgacgtacgaacgtcctggggcatccccgaagaggagctatgatggg
gagcccacggctacaccagtctgccatcaggttgatatagtggaactgaaggatttggag
aaggagtttgtgctggcccgtacccgtctactgctcgcaaaacatgacccatgctcagca
gcaatagcaggcagtgcctctgctgaggagatggttgccttgcttgttcaagtgggactc
tttgatgctgctgtctccttgtgtcagaccttcagactctcactgaaccccatctttgaa
ggactgtccttcaagtgcatcaaactgcagctcatcggggaggctgcacactctgatgcc
tgggactggttgaaagccaatcaaattccttcgatcatcgctacaaaagaatccagtgcc
acagatgaagcctggaggttgttgtcatcctaccttgatcgttaccaatctccaagtgct
cagtatcatcgctgtgtgattaacaaactgctgtcccatggagtgccccttccaaactgg
ctcattaacagctataagaaagtggatgttgccgggctcctgcggctgtacctgaactat
gaccttttggaggaagccgtcgagctggttttggaatacgttgatgcgttaatggggaaa
ggacctcagtacttcaacatggagaggtccctgtcagccacagctccagcggtttggctg
ccgtacaccgctattgaccagttactgcaggcactcggagagaaccccggcaacctgaat
aacgtgaggctgtgtgagaaactgcggagcaggctggctgattatcaccagcaggtggat
cagacaacgctcgacatgaacagctaccggcgccagcagcagcagttattgtga
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integrated database retrieval system
