Hemiscyllium ocellatum (epaulette shark): 132824375
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Entry
132824375 CDS
T09720
Symbol
frem1a
Name
(RefSeq) FRAS1-related extracellular matrix protein 1a isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132824375 (frem1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
hoc04091
]
132824375 (frem1a)
Lectins [BR:
hoc04091
]
C-Type lectins
Lecticans
132824375 (frem1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Big_9
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
132824375
NCBI-ProteinID:
XP_060694758
LinkDB
All DBs
Position
2:98763997..99164517
Genome browser
AA seq
2111 aa
AA seq
DB search
MKHYWERPAILMYLCLWRCIAPSFIQVNLGLSVPKGQSAFLSKEDLQFNVPKEKDSCKVE
VVVNEPITQRVGKLTPQVFDCHFLANEVKYTHNGCPILDEDQVMLRLYRFTETETFTETF
ILKVHLLDSDCNIIQLGSTSLEVPEFYGFSNIIDRNVLTFVYDVAMNLDCTVHITTQDTL
LPAYGQLVMGKPPEGPARGDQPNSFLQIMKKSSKEKSSQDNLKEVHALKVNCEEFLVLGL
HYQHLRPPSPDVDYITISLELVDSRSKNVHKKENAWIPVRIRNAFPNLPPKASFIAMYIL
EVDQFILTPITTQTLDGEDSESPKTQLVFNVTKPPLQGFITHLSDHTKPITSFTWTDLNE
MLIAFQPPNNSHTERRNYEVEFEVHDFYFRNSAPIMVHISIRTTDTNAPRVSWNMGLDLL
EGQSRTITWEQFQVVDNDALSAVRLITVDGLLHGRLTVRGGKGFMFTVDDIKSGVVHYHH
DDSDSTNDFIVFRIFDGNHSTRHKFPINILPKDDSPPFLINNVILELYEDQEIQIEKVML
QASDMDSSDDYILFKIIKPPQAGEILKRTAPELSGYPITRFQQSDLFNARIYYRHLGGEV
FEDSFEFILSDSHEPPNLSDPQTVIIHITPVDDQLPKEAPWALRHLVVKETEIAHLTKNQ
LYFTDTEIPDGEIVYAITAGPFFTSVLGLTDTGKLFLTDSMKKLTKKSNVPMLRSFTQHA
VNYLKVAYMPPIQDIGPDPQHLQFLFSVSNQHGGTLIGLCFNITVLPVDNQAPEILTKQL
DVEEGGVGQITVDHILVMDVDTKDHQIKIVLQKQPIHGVVKVDGDPMIEGDIFNLEDLGQ
LKISYNHDDSETRRDEVTFSATDGSNSAECVLQIQILPVNDEPPMMKPGLKPMMHCLEGA
EVAITAENLYATDLDSDDERLMFMIARQPFHGVVQKDSQIIDHFSQADILSGSVTYIHTG
GEVGLTPCFDTITFVISDWDGGTVEGCCSEEPFSPLLSIHNSLPVYDLNITIMPINNQPP
TIIIGETFIVDEGLSAAITAGHLCASDLDTANDELTFVLWSSPQFGYIENTLPSPGYEKS
NVGISIDSFDMKHIKDFHINYVQFHHQQIEPTADQFMLYVTDGQHQSAAVPFYIIIKPTN
DEPPSFLARNITVSEGQVRELDPSIINVADLDLPTDSLVFIIKQQPNHGKIVNGNDIIQY
KHQIHSHEEHLVHDFTMDQLKHGMKLMYKHDDSETKTDSFTIQLSDGKHAVNKVIQVTIL
PVNDEKPLLSRNNELEVEIGDSRIISSVVLEAEDKDTSRQHVYYVMDSVPKQGVLQIKEG
RDWIPLHPGMNCSQDDIDMNRLRYIHTGAIGSNGRDSFHFHLSDGDHRSSVHRFQIFIQN
IEKGEITIFLKPLTIFKGERGILTTAVLLASDGSNKPEELLYVITMPPSYGQVEYITYPG
VAITSFSQMDVAAQAVSYTHKSTVTASSDSLRFIVSNGLSTRNGSLEIIIENIDRILPTL
LNNKGIRLVEGSMVSISPDVLQLSDPDTPPQNLTYIIAQQPQHGQLHLKGAVLKQHNFTQ
LDVDSMDIAYKHDGGDSQIDRFTFVVTDMTNHGFLVNGVLHTEPSVFTIQVDHKDKAFPR
IVYLQCPSQVEVFKNQKYGIYISSRHLKASDRDSKDEELIYHILREPNIGYLENVTTGGF
IWNKFTQKDLNSRNIIYIISASSAVMSDSLEFQVSDSSGNSALPQILDLKWSRIEMMESE
YRVCEDVGLFSVKVLRTGYFMDSAFVGIKVNSISALVGKDFTHSSANLIQFDPGVSVKSW
NIVITNDKLEENEETFEVLLTSPINAVLGAKAKILIKIIDGEKDRCNLAFMNDRNEENPP
GRVLRERLASGSSTFPNLKSNSSLEEGMAMTNLHEDLKRSQGDVMQQLPLKPPSKKKLMY
HGVIALKVEGDRSPSVYNRRATVVITSQSQQHFLGKTELSQIDKVTTVPASQQIPVQQEP
SSKICPSGWTYHDYRCYYLNTKHKATWIGAARACKEMYHGNLVSVISKQDMEWLWDFSGR
RSFWIGLNDRISPGKWNWAGGEHVSFTNWKRGLPPTSRKKGKNCVLVRRRGKWEVKNCKQ
GKPHYYMCSVH
NT seq
6336 nt
NT seq
+upstream
nt +downstream
nt
atgaagcattactgggaacgtcctgcaatccttatgtatctttgtctttggcgatgtatt
gcaccgtcctttatacaagtgaatcttggcctaagcgttcctaaggggcagtctgcattc
ctttccaaggaggatctgcagttcaatgtcccgaaggagaaggacagctgtaaggtggag
gtggtcgtgaatgaaccaatcacacaacgtgtcggcaagcttacccctcaggtttttgat
tgccacttcctagccaatgaagtgaaatatactcataatggttgtccaattcttgatgag
gatcaagtcatgctgaggctctacagatttacagagacagaaaccttcacagaaacattc
attttaaaggttcacctgctggattcagactgcaacatcattcagctgggctcgacatca
ttggaagtccctgagttttatggtttttctaatataatcgataggaatgtgcttacattt
gtctatgatgtggcgatgaaccttgattgtactgtacacattactactcaggacacatta
ctgccagcatatgggcaacttgtcatgggaaagcctccagaaggaccagctcgtggtgac
cagccaaacagcttcctccaaattatgaaaaaatccagcaaggagaagtcaagccaggat
aatttgaaggaggttcatgctcttaaagtgaactgtgaagagttcctggtactgggtctt
cactaccaacacctccgtcccccttctcctgatgtcgactatatcaccattagcttggaa
cttgtcgacagcagaagcaaaaacgtgcacaagaaagagaatgcctggattccagtcaga
atcaggaatgcttttcccaatttgcctccaaaagcaagttttattgcaatgtacatcctg
gaagtggatcaatttattctgacccccataaccacacaaactctggatggtgaagacagt
gagagccccaaaactcaacttgtcttcaatgtcaccaagccacctctacaaggttttatt
acccatttatctgaccacaccaagccaatcacatctttcacctggactgatctaaatgag
atgctcattgcatttcaacctccaaataacagccacactgaaaggagaaactatgaggtt
gaatttgaagttcacgacttctatttcaggaatagtgcaccaatcatggtgcacatctca
atcaggacaactgatactaatgctcccagagtttcctggaacatgggacttgaccttttg
gaaggccagtctcgaactatcacctgggagcagtttcaggtagtggataatgatgccctc
agtgcagtccgtttgattactgtggatggtttactacatgggcgacttactgtaagaggt
ggaaaaggttttatgtttacagtcgatgacatcaagtctggcgttgtccattaccatcat
gatgacagtgactccacaaatgacttcattgtatttcgaatttttgatggtaatcatagc
acccggcacaaatttcccattaacatccttccaaaagatgatagccctccattcctcatc
aacaatgtcattctggaactttatgaggaccaggaaatccagattgagaaggtaatgctt
caagcctcagacatggactcaagtgatgattacatcctcttcaaaatcatcaaaccccct
caggctggggaaattctgaaaagaacagctcctgaactgtcaggttaccccataactaga
tttcagcagagtgatctctttaatgctcggatctattatcgtcacttgggaggtgaagtg
tttgaagattcctttgaatttatcctgtctgacagccatgaaccaccaaatctctcagat
cctcagactgtaattattcacattacaccagtggacgatcagcttcccaaagaagcacca
tgggctctgcgccatcttgttgtcaaggagactgaaatagcgcatctgacaaagaaccaa
ctttatttcactgatactgagatacctgatggtgaaattgtatatgcaataacagctggt
ccattctttacatcagtgcttggcctgacggatactgggaaactgtttttgacagacagc
atgaagaaattgacgaaaaagtctaatgtcccaatgctgagatcattcacacagcatgcg
gtgaactacctgaaagtggcatacatgcctcctatacaggatattgggccagatccacag
caccttcaatttctcttttcagtcagtaatcaacatggtggcacattaattggcctttgc
ttcaatattacagttctcccagttgacaatcaagcaccagagatcttgacaaagcaattg
gatgttgaagaaggaggtgtaggtcagattacagtggatcatattctggtgatggatgtg
gacacaaaagatcaccagatcaagattgtgcttcagaaacaaccaatacatggagtggtc
aaagtggatggtgatcccatgattgaaggggacatcttcaatctagaagaccttgggcag
ttaaaaattagttacaatcatgatgactctgagacacggcgtgatgaagtcaccttttca
gccactgatggttcaaattcagctgaatgtgtactgcaaatccagatactgccagtgaat
gatgagcctccaatgatgaagcctggcctgaagcccatgatgcattgtcttgaaggggca
gaagtcgctatcacagcagaaaatctgtatgctactgacctggatagcgatgatgagagg
ctgatgtttatgattgcaaggcaaccattccatggagtggtacagaaggatagtcaaatt
attgaccacttttctcaggcagatatcctttctggctcagtgacatatattcatactggt
ggtgaggtgggattaacaccctgttttgacaccattacttttgtcatctcggattgggat
ggaggtacagtggaaggctgctgttctgaggaaccattttctcctttgttatcaatacac
aactctctccctgtgtacgatcttaacattacaataatgcccatcaacaatcagccaccg
actattatcattggtgaaacctttattgttgatgaagggttgtcagctgctatcactgcc
ggccatttgtgtgctagtgatctggatactgccaacgatgaactgacttttgttttgtgg
tcttcaccccaatttggttacatagagaacacattaccttcaccaggctatgagaagagt
aatgtgggcatcagcatagattcctttgacatgaaacacataaaggatttccacatcaac
tacgttcagtttcatcatcagcagattgaaccaacagctgatcagtttatgttgtatgtt
actgatggacagcatcaatctgcggcagtaccattttatattataatcaaaccaaccaat
gacgagcctccaagcttccttgccagaaatattacggtttctgaaggtcaagtacgtgaa
ctggacccatcaataatcaatgtggcagatctagacttacccacagacagcttggtattc
attataaaacagcagcctaaccatggaaagatcgtgaatggcaatgatatcatccagtac
aaacatcaaatccacagtcatgaagaacatctcgtgcatgacttcacaatggatcagctg
aagcatggaatgaagttaatgtataagcatgatgactccgaaactaagacggatagtttc
accattcagctgtcagatggcaagcatgcagtaaacaaagtcattcaagtcacaattctt
ccagtgaatgatgaaaaaccattattgagcagaaacaatgagttggaggtggagattggg
gatagcagaatcatctccagtgtggtgctggaagctgaggataaggacacttcacgacag
catgtttattatgtgatggatagtgttcccaaacagggagtgctccagatcaaggaaggc
agagactggatacccctacaccctggcatgaactgcagccaggatgatattgacatgaac
cggctgagatacatccacactggagcaattgggtcaaatggtcgagacagctttcatttc
cacttatcagatggtgatcatagatcttctgtccaccgtttccaaatcttcatccaaaac
attgaaaagggtgaaattacgattttcctaaaaccactcaccatcttcaagggagagcga
ggcattttgacgacagctgtccttcttgcctctgacggctcaaacaaaccagaggagctg
ctttacgtcataacaatgcccccaagctatggccaagtagaatatatcacctaccctgga
gtggcaataaccagttttagccagatggatgtggcagctcaggcagtatcttatactcac
aaaagcacagtgacagcttcaagcgactcattgagattcattgtcagcaatggactgtcc
acaagaaatggaagtctcgagatcatcattgagaatattgatcgtatcctgcccacactg
ttgaataacaaagggatccgattagttgaaggctccatggtgtccatttctcctgatgtg
ctacagttgtctgatcctgatacccctccacagaacctcacctacattattgcacagcag
ccacagcatggacaactgcatctcaagggggctgttctgaagcagcacaacttcacacag
ttagacgttgacagtatggatattgcatacaaacatgatggaggagattcgcagattgac
agattcacctttgttgtcactgatatgactaatcatggctttcttgtcaatggagtattg
catactgaaccatctgtattcacaattcaggtggaccataaggacaaggctttccctaga
attgtctaccttcagtgtccgtcacaagttgaagtgttcaaaaatcaaaagtacggaata
tatatttcctctcgacacttgaaagcatctgatcgtgatagtaaagatgaagaactcatt
taccatattttacgtgagccaaatattggttacttggaaaatgttaccactgggggattt
atttggaataagttcacacagaaagatttgaacagcagaaacatcatttacatcataagt
gcttcctcggcagttatgtcggacagtttggagtttcaggtttcggactcctcaggcaac
tctgctctcccgcaaatacttgatctcaaatggtctcgtatagaaatgatggaatcagaa
taccgggtatgtgaagatgtaggactattctctgtgaaagtcctgaggacagggtatttt
atggattctgccttcgttgggataaaggtcaacagcatttcagctttggttggaaaagat
tttactcacagttctgccaaccttatccagtttgatccaggtgtgtcagtgaagagttgg
aatatagtcattactaatgacaaattggaagaaaatgaggaaacatttgaagtgttacta
acatcgccaatcaatgcagttcttggtgcaaaggcaaagatattgattaagatcattgat
ggagaaaaagatcgctgcaatcttgccttcatgaatgacagaaatgaagagaatccacca
ggcagagtattgagagagagactagcttcaggttcttcgaccttccctaatctcaagagt
aacagtagcctagaggaaggaatggcaatgactaacttgcatgaagacttgaaaaggtcc
caaggggatgtgatgcagcagctccctctgaaaccaccgtccaagaagaaactaatgtac
catggagtaatagcactgaaagttgaaggtgaccgtagtccatcagtgtacaatagaaga
gcaacagtggtgatcaccagccagagtcaacagcattttcttggtaaaacagaactttca
cagattgacaaagtcacaacagtgccagcttcacaacagattcctgtacaacaggagcca
agttccaagatatgtccctctggatggacttaccatgattataggtgctattatctaaac
actaaacataaggcaacctggattggagcagccagagcctgcaaggaaatgtaccatggc
aaccttgtgagtgtcatttcaaaacaagacatggaatggttgtgggacttcagtggaaga
cgttctttctggattggactcaatgaccggatcagcccaggcaaatggaattgggctgga
ggagaacatgtgtctttcacaaactggaagcggggcctccctcctacttcaaggaagaaa
ggcaaaaactgtgtcctagtgaggagaagagggaagtgggaggtgaaaaattgcaagcag
ggcaaaccacattattacatgtgctctgttcattaa
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