Hemiscyllium ocellatum (epaulette shark): 132824396
Help
Entry
132824396 CDS
T09720
Symbol
ddb1
Name
(RefSeq) DNA damage-binding protein 1 isoform X1
KO
K10610
DNA damage-binding protein 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03420
Nucleotide excision repair
hoc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132824396 (ddb1)
09124 Replication and repair
03420 Nucleotide excision repair
132824396 (ddb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hoc04121
]
132824396 (ddb1)
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132824396 (ddb1)
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
132824396 (ddb1)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
132824396 (ddb1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
132824396 (ddb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RIG_2nd
Beta_propel
Motif
Other DBs
NCBI-GeneID:
132824396
NCBI-ProteinID:
XP_060694803
LinkDB
All DBs
Position
18:complement(31389293..31476569)
Genome browser
AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNACVTGHFTSADDLNLLIAKNTRLEIYVVTPEGLRPVKEVGMYGK
IAVMELFRPKGEGKDLLFILTAKYNACILEYKQNGENIDIITRAHGNVQDRIGRPSETGI
IGIVDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQVPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGALIIGQESITYH
NGDKYLAIAPPAIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEREEQMDGNVTVRDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVAGMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSTRD
TDDMLVLSFVGQTRVLMLNGEEVEETEMPGFVDDQQTFYCGNVAHQQLIQITSGSVRLVS
QEPKSLVSEWKEPNGKNISVASCNNSQVVVAVGRVLYYLEIHPKELRQISFIEMEHEVAC
LDITPLAEGTSMSPLCSVGLWTDISARILKLPSFETLHKEMLGGEIIPRSILMTTFEGSH
YLLCALGDGALFYFGLEIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLNES
PKRICYQEASQCFGLVSSRIEVLDPSGGTTVLRPSASTQALSTSVSSSKLFPSSTSQHES
SFGDEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSIVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIIVFQYSDGKLQTIAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENSFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTLGSVLFGTVNGMIGLVTSLSESWYNFLLEVQNRLNKVIKSVGKIEHSFWRSFHSER
KTEPAAGFIDGDLIESFLDLSRPKMQEVAAGLQIDDGSGMKREATVDDLIKIVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacaactatgtagtgacagcgcaaaaaccgacggccgtgaacgcttgcgttacc
ggtcacttcacctcagcagatgatttgaacctgctgattgccaagaacaccaggttggag
atctatgtagtgacaccggagggtttgcgccctgtcaaggaagtgggcatgtatggcaag
attgctgtaatggaactcttccgcccaaagggagaaggcaaggacttgcttttcattctg
actgcaaaatacaatgcctgtattctggagtacaaacaaaatggagaaaacatcgatatc
atcacacgagcacatggaaatgtacaggatcgtataggccgtccctctgagactggaatc
atcggtattgtggaccctgagtgccgtatgatcggtctcaggctgtatgatgggctcttt
aaagtgattccattggatagagacaacaaagagctaaaagcattcaatatccgactggaa
gaactgcatgtgattgatgtgaaattcttgtatggctgtcaggtcccaaccatttgcttt
gtctatcaggatccgcagggccgtcatgtgaagacctatgaagtatccttaagagaaaaa
gaatttaacaagggaccctggaaacaggaaaatgttgaggctgaagcatcaatggttatt
gcagttccagaaccatttggaggagcgctaatcataggccaggagtcaattacataccac
aatggcgacaagtatcttgcaattgcaccaccagctatcaagcaaagcacaattgtttgc
cacaaccgtgtggatcccaatggttcccgataccttctgggagatatggaaggtcgtctg
ttcatgctgttactggagagggaagaacaaatggacggaaatgtcaccgtcagagacctc
cgtgtagaactgttgggagagacatccattgcagaatgcttgacatatttggataatgga
gttgtattcgttggatcccgtcttggagattctcagcttgtcaagttaaatgtggacagc
aatgaacaggggtcctatgttgctggcatggaaaccttcaccaatttaggtcctattgtg
gatatgtgtgtagtggatctggaaaggcaaggacagggccagctggttacttgttcagga
gcatttaaggaaggctctctgagaataattcggaatggaattgggatccatgagcatgct
agcattgatcttcctggtattaaaggtctgtggccattgcgttctgattccactcgtgac
actgatgatatgttggttctctcatttgttggacagactcgtgtgctgatgctcaatggg
gaggaggtagaagagactgaaatgccaggcttcgttgatgaccaacaaaccttctattgt
ggaaacgtggctcatcagcagctcattcagataacatctggttcggtgcgactggtcagc
caagaacctaaatcactggttagtgagtggaaggagccaaacggaaagaatatcagtgtt
gcatcctgtaataacagccaagttgtggtagcagtgggccgggtattgtactacctggag
attcacccgaaagagctcagacaaatcagctttatagagatggagcatgaggttgcttgc
ctagacatcactccattggctgagggtactagtatgtcacccctatgctctgttggactt
tggacagatatttcagctcggatcctcaagctaccatcatttgaaaccctgcataaagaa
atgcttggtggagagataattccacgttccattttaatgacaacgtttgaaggcagccat
tacttgctgtgcgctctcggtgatggtgctctcttttattttggacttgaaatcgaaaca
ggtttgctgagtgaccgtaagaaagttacgctggggacccagccaacagtcttacgaact
ttcagatctttgtctaccacgaatgtttttgcttgttcagaccgccccactgtcatttac
agcagcaatcacaagcttgttttctcaaatgttaacctcaaggaagtgaactacatgtgt
cctcttaactctgagggataccctgacagcttggccttggccaacaacagcactttaacc
ataggaactattgatgaaattcagaaactacacatccgaacagttccccttaatgaatct
ccaaaaagaatttgttaccaagaggcctctcagtgctttggtctggttagcagcagaata
gaagtgttggaccccagtggaggtaccactgtcctgagaccaagtgctagcactcaggct
ctttctaccagtgttagttccagtaagctttttccaagtagtacttcacagcatgagagc
tcatttggggatgaagtggaggtccacaatctactaatcatagatcaacatacatttgaa
gttcttcatgctcatcagttcctgcagaatgaatatgccctaagtattgtgtcctgcaag
ttgggcaaagatcccaatacttacttcattgtaggtacagcaatggtatatcctgaagaa
gcagaaccaaaacaaggacgtattatagtattccaatactctgatggcaagcttcagaca
atagcagagaaagaagtaaaaggtgccgtgtattctatggtggagttcaatggcaagttg
ctagcaagcatcaatagcacggtgcgattgtatgaatggacagccgaaaaagagctacgc
acagagtgcaatcactacaataatatcatggccctctatctgaaaacaaaaggagacttt
atcttagtaggagacttaatgcgttcagtgctgctgcttgcctataaaccaatggaaggg
aattttgaagagattgcccgagatttcaaccctaattggatgagtgctgttgaaatacta
gatgatgacaacttcctgggtgctgaaaactctttcaacttatttgtgtgtcagaaagac
agtgcggctacaacagatgaagaaaggcaacacctccaagaagtggggttgttccacctt
ggcgagtttgttaatgtgttctgtcatggatctctggtaatgcagaatcttggtgagact
tccacacctacactgggttcggtattgtttggtacagtcaacggcatgattggcctggtt
acctcgttgtctgagagctggtataacttccttttggaagttcaaaatcgactgaataaa
gttatcaaaagtgtgggcaagattgaacattcattctggagatcgtttcactcagagaga
aaaactgaacctgctgcaggtttcatagatggagaccttatcgagagcttcttagatctc
agtcgacctaaaatgcaggaagtggctgcaggcttacagattgatgatggaagtggaatg
aaaagagaagcaactgtagatgatctgataaaaattgttgaagaattgaccagaatacat
tga
DBGET
integrated database retrieval system
