Hemiscyllium ocellatum (epaulette shark): 132824438
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Entry
132824438 CDS
T09720
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132824438 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hoc04147
]
132824438 (copb1)
Membrane trafficking [BR:
hoc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
132824438 (copb1)
Exosome [BR:
hoc04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
132824438 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
HEAT
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
132824438
NCBI-ProteinID:
XP_060694916
LinkDB
All DBs
Position
18:complement(45650235..45696429)
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AA seq
952 aa
AA seq
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MTAAENICYTLINVSLDSEPPNEISLKIDLEKGDVKTKTDALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEPELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFENLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPT
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIDLREHPTHERVLQDLVMDVLRVLSTPDLEVRKKTLHLALDLVSSRNVEELVIVL
KKEVIKTNDVSEHEDTDKYRQLLVRTLHSCSVRFPDMAENVIPVLMEFLSDSNEAAAADV
LEFVREAIQSFDKLRPIIIEKMLEVFHAIKSVKIYRGALWILGEYCSSKEDIQSVMTEVR
RSLGEIPIVESEIKKETGELKIDGDVQVISTQKLVTEMGTYATQSALSTRPSKKEEDRPP
LRGFLLDGDFFVAGALATTLTKIALRYVALQQDKKKQNSFAAEAMLIMASILHLGKSSLP
KKSITDDDVDRISLCLKVLSECSPLMNNIFNKECRKSLSQMLSAKLEEEKQTQKKQSEKR
NVLVQADDPISFMQLMAKNEMTSKEDQFQLSLLAAMGNTQRKETSDPLTSKLSKVTQLTG
FSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPHD
FANIKANVKVASTENGIIFGNIVYDISGAASDRNCVVLSDIHIDIMDYIQPAVCTDAEFR
QMWAEFEWENKVTVNTNITDLNEYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSIF
GEDALANVSIEKPVHLGPDAPVTGHIRIRAKSQGMALSLGDKINLSQKKVKA
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgcagaaaacatatgctatacgctcataaatgtttccttggactctgaacca
ccaaatgaaattagcctgaaaattgatttggaaaagggagatgtgaagaccaagactgat
gctttaaagaaggtgattatcatgattctaaatggagagaagctcccagggctcctaatg
acgatcattcggtttgtgttaccactgcaagatcacacaattaaaaagctgctgcttgtc
ttttgggagattgtccctaaaacaaccccagatgggaagttgctgcaagagatgattctt
gtctgtgatgcctacagaaaggatctgcaacatccaaatgagtttattcgaggatccact
cttcgtttcttgtgcaaactaaaggagccagaacttttagaaccactgatgccagccata
cgtgcctgtctggagcatcggcatagttatgtacgcagaaatgctgtgctagctatctac
accatctacaggaactttgagaaccttattcctgatgctcctgagttgatccatgatttc
ctggtgaatgaaaaagatgcgagttgtaagcggaatgctttcatgatgctgattcatgca
gatcaggaccgagcacttgattatctgagtacttgtattgatcaggttcatacttttgga
gacattctccagctggttatcgttgagctgatttataaggtttgccatgctaatccaaca
gaaagagcacgatttatccgttgtatttacaacttactccagtcctcaagtcctgcagta
aaatatgaagcagctggaactttagttacactgtcaagtgctccaacagctatcaaggct
gctgcacagtgctatattgatttgattattaaagagagtgataacaatgtcaagctaatt
gttcttgatcgcctgatcgatctcagggagcatcctacgcatgagagggtgctgcaggat
ttggtgatggatgtcctccgagttttgagcactccagatttggaggtacgcaaaaagacg
ttgcacttagcattggatcttgtttcatcacgtaacgttgaagagcttgtcatagttctc
aagaaggaagtaattaaaacaaatgatgtatcagaacatgaagacacagacaagtaccgg
caacttctggtcagaacactccattcgtgcagtgtccgttttccagacatggctgaaaat
gttatccctgtgctgatggaattcctcagtgacagtaatgaggcggctgctgctgatgtt
ctcgagtttgtgcgagaagcgattcagagttttgataaacttcgaccaatcatcattgag
aagatgctggaggtgttccatgccatcaaatctgtgaagatataccggggagctctctgg
attttgggcgagtactgtagctccaaggaggatattcagagtgtaatgactgaggttcgt
cgatccttgggtgagattccaatagttgagtctgagataaagaaagaaactggtgagctg
aagattgatggtgatgttcaggtgatttcaacacaaaaacttgtgacagaaatggggaca
tatgcaacacagagtgcccttagcacaaggccttctaaaaaggaagaagatagaccaccc
ttgcgagggttcctactagatggggacttctttgtggctggtgctcttgcaactacgcta
accaaaatagcgttgcgttacgtggcacttcaacaagacaagaagaaacagaatagtttt
gctgcagaggccatgctgatcatggccagcattttacaccttggtaaatcatcactccca
aagaaatcaatcacagacgatgacgtggaccgtatctcactgtgtcttaaagtcctttca
gaatgttccccactgatgaacaacatcttcaacaaagaatgcagaaaatctctctctcaa
atgctatcagcaaaactggaagaggaaaagcaaactcaaaagaaacaatctgaaaaaagg
aatgtattggtacaggccgatgatcccatttcctttatgcagctgatggccaagaatgag
atgacctctaaggaggaccagtttcagctgagcttattggctgcaatgggtaacacacaa
cggaaagaaacttctgatcccttaacatccaagctcagcaaggtcacacaactgactggt
ttctctgatccagtatacgcagaagcctatgtacatgttaatcaatatgatattgtacta
gatgtacttgtggtcaatcaaaccagtgacacacttcagaattgcactctggaattagcc
acattgggtgatctaaaactggttgagaaaccttcacctctaactttggctccacatgat
tttgctaacattaaggccaatgtcaaagtagcatcaacagaaaatggcattatctttggt
aatatagtgtatgacatatctggggctgctagtgatcgaaactgtgtggtactgagtgac
attcacattgatatcatggactatatacagcctgccgtgtgcactgatgcagaatttcgt
cagatgtgggctgagtttgagtgggagaacaaggttacagttaacacaaatattactgac
ctcaatgaatacttgcagcacattcttaagtctaccaacatgaagtgtttgactccagag
aaggctctttctggttattgtggttttatggcagcgaatctttatgctcggtccattttt
ggagaagatgcacttgcaaatgtcagcatagagaaaccggtacatcttggaccagatgct
cctgtgactggtcacatacgcattagagcaaagagtcagggaatggctctcagtttgggt
gacaagatcaacctgtcccagaagaaagtaaaagcatag
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