Hemiscyllium ocellatum (epaulette shark): 132824570
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Entry
132824570 CDS
T09720
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc02010
ABC transporters
hoc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132824570
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132824570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hoc02000
]
132824570
Transporters [BR:
hoc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
132824570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
132824570
NCBI-ProteinID:
XP_060695165
LinkDB
All DBs
Position
2:114301062..114465647
Genome browser
AA seq
2265 aa
AA seq
DB search
MASFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFLFFILISVRLSYPPYEQHECHFPNK
AMPSAGTLPWIQGIICNANNPCFRYPTPGESPGVVGNFDKSIISRLFYDAKKILLYSQTD
GNMGAFHNLFEALKKFSNSTSDLRLRDFLVENETLSEFLHQDMSFDHDAVEQILDAHVNF
GKVITEGQGLQLKDLCDGPKLKDFVIIGDHSTATNTQSLICTLSEAELKKVELTFFLNLD
ILKLIHKGLITNPKEALNVTEALDEVLQNLMILAKELLEVKSWTDMRREVMLLTNENTTG
SPQEVYQAVTRIVCGHPEGGGLKIKSLNWYEDNNYKYLLGRNGTDDDDAAHYDNSTTPYC
NDLMRNLESNPISKMIWRVMKPLLVGKVLYTPDTPMTRRIVQEVNETFQELSVFKEIGEM
WKETGPKIWEFMERSQAMDLIRSLLKKQVTANYIDSKLDGTSWSAADLSKFLAKYPEEVQ
HPNGSSYTWREVYNETEQAIHKISLAMECVKWDKLEAVSTEEKLINKSMELLDERKFWAG
IVFLDFDSNSTKPTEHIKYKIRMDIDNVERTNKIMDGYWDPGPRADPFEDLRYIWGGFSY
LQDIIEHAIIRTVTGRKEKTGVYIQQMPYPCYVDDLFLRVLSQSLPLFTTLAWIYSVAVI
IKGIVYEKEARLKETMRIMGLGSGTLWFSWFISSLIPLLVSAALLVVILKEGNILPYSNP
IAVFTFLAVFGVVTILQCFLISTMFSKANLAAACGGIIYFTLYLPYVLCMAWQEYTTYSI
KIIASLLSPVAFGFGFDYFAQFEEQGIGVQWHNLFSSPSKGDEYNITTSIILMIIDTFLY
GVLTWYIEAVFPGQYGIPKPWYFPFTKSYWCGDTIQNIKQTPSAKNTNSQICVEEEPSHL
TLGVSIQNLVKIYRNGKKLAVDGLSLSFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSG
TAYILGKDICSDLDSIRQSLGVCPQHNVLFDLLTVEEHVWFYARLKGLSRSEVKTEVEQM
VLDVGLPNKRKETTNKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWDLLL
KYRQGRTIILSTHHMDEADMLGDRIAIISNGKLCCCGSSLYLKNQLGTGYYLTLVKKDLE
PSLSSCRNSSSTMSYLKKEDSVSQSSSDAGLGSDQESDTITIDVSAISNLILKHIPKARL
VEDIGHELTYVLPYEAAKDGAFVELFHEIDDRLSDLGISSYGISDTTLEEIFLKVAEDNG
VDTETSDGMIPACRNRRSRFVDRQSCLRPFTDDAADVNDSDGDPEARETDFLSGMDGKGS
YSVRGWNLFRQQFVALFWKRLIYAKRSRKGIFAQIVLPAVFVCIALVFSLIVPPFGKYPS
LELHPWMYDEQYTFISNDAPGNEHTEKLLNSLVNKPGFGTRCMKGNPILDNPCEPAAAEW
ITPSVSDSIMDVFLNGNWTMDNPSPTCRCSDNTIKKMLPDCPAAAGGLPPPQIKLNSTDI
LQNLSGRNVTDYLVKTYAQIIGRSLKNKMWVNEFRYGGFSLGGENSPLLPSQEEVTQAIL
HLKKALALTQGSASDRFMSRLLKFMSGLDTKDNVKIWFNNKGWHAIGAFLNVMNNAILRT
RLGEGEDPSAYGITAINHPLNLTKEQISEVALMTTSVDVLVSICVIFAMSFVPASFVVFL
IQERVTKAKHMQFISGVKPAIYWLANYVWDMCNYVVPATLVIVIFICFQQKSYVSSSNLP
VLALLLFLYGWSITPLMYPASFVFRIPSTAYVILTSVNLFIGINGSVATFVLELFSNNKL
NSINEVLKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAM
AVEGVVFFFITVLIQYRFFIKPRPTSVKLPVLTDEDEDVAKERQRVLSGGCQNDILELKS
LTKIYRMKRNPAVDRLCVGIPPGECFGLLGVNGAGKTTTFKMLTGDSYVTGGEAFLNGYS
ILSNMQEVHQNMGYCPQFDAINELLTGREHLELYGLLRGIPEKEICKVAEWGIRKLGIIR
YADKRAGNYSGGNKRKLSTAMALLGGPPVLFLDEPTTGMDPKARRFLWNTILSIVKEGRS
VVLTSHSMEECEALCTRMAIMVNGKFRCLGSVQHLKNRFGDGYTIIVRIVGPNPDLSPVE
QFFKRAFPGSILKEKHRNMLQYQLPSYQSSLSRIFSILSSNKEKLQIEDYSVSQTTLDQV
FVNFAKDQSDDDLSKDMSIQRNETVLDVALLNTFLHDNSVKESCV
NT seq
6798 nt
NT seq
+upstream
nt +downstream
nt
atggctagtttctggacacagctgggattgctactctggaagaattttacgtatagaagg
agacaaacatttcagttgttgatagaggtggcgtggcctctttttctgttcttcatattg
atctctgtgcgattgtcctaccctccatatgagcagcatgagtgccacttcccaaacaag
gcaatgccatctgctgggactctgccgtggattcaaggaattatttgtaatgcaaacaac
ccctgtttccgctacccaacaccaggtgaatccccaggagtggttggaaattttgataaa
tcgataatctctcgcctgttttatgatgccaagaagattcttctctacagccaaacggat
ggcaacatgggagcctttcacaacctgtttgaagcactaaagaaattcagcaattctact
tcagatcttaggctccgggatttcttggtcgagaatgagacgctgtcggaatttctgcat
caagatatgtcatttgaccatgatgcagtggaacagatcctagatgctcatgtaaatttt
ggaaaggtcattacagaggggcaaggattacagctgaaggacctttgtgatggcccaaaa
ctgaaggactttgttatcattggagatcactccacagccactaacacccaatctcttatt
tgtaccttatctgaggcagaactgaaaaaagtcgaactaacattctttttgaacctggat
attttaaagttaatacataaaggattgatcactaatcctaaagaagcattgaatgtaact
gaagccttggatgaagttctgcaaaatctcatgattctagccaaagagctactggaagtg
aagagttggactgacatgcgaagagaggtgatgttactgaccaatgagaatacgacaggg
tcaccccaagaggtgtaccaagccgtgacaagaattgtgtgtggccatcccgaaggtggt
ggattaaagatcaagtccctgaattggtatgaggacaacaactacaaatatcttttgggt
agaaatggcacggacgatgatgatgccgcacactatgacaactcaacaacgccatactgc
aatgacctgatgaggaacttggaatctaatcccatctctaaaatgatctggagggtaatg
aagccattgctggttggtaaagtgctgtacactcctgatacccctatgactcgaagaatt
gttcaggaggttaatgagacctttcaagagctgagtgtcttcaaagagattggagagatg
tggaaagagactggaccaaagatctgggagtttatggaaagaagtcaggcaatggatttg
attcgaagcctactaaagaagcaggttacagcaaattacattgattcaaagctagatgga
acctcttggtcagccgctgacctctccaagtttcttgccaaatatccagaagaggttcaa
catccaaacgggtcctcgtacacctggagagaggtttacaatgagaccgaacaggcaatt
cacaaaatatcactcgctatggagtgcgtgaagtgggataagttagaggctgtgtccact
gaggagaaactgataaacaaatcaatggagctgctggatgaaaggaaattctgggcggga
attgtcttcctggactttgattcaaacagtacaaaaccaacagagcacatcaagtacaaa
attcgaatggatatagacaacgtggagagaacaaacaagatcatggacgggtattgggat
cctggacctcgtgctgacccatttgaagacctccgttatatttggggtggcttctcgtac
ctccaggatataatagagcatgcaatcatccgcaccgtgaccgggaggaaggagaaaact
ggcgtgtacattcagcaaatgccatacccctgctacgtggatgatctatttcttcgtgtt
ctgagccagtcactacctcttttcaccactctggcctggatctactctgtcgctgtgata
atcaaagggatagtatatgagaaagaagcacgtctcaaggagaccatgaggattatgggt
ctgggtagtggcacactgtggttcagctggttcatcagcagtttaatccctcttctcgtc
agtgctgccttgctggtggtaattctaaaggaaggaaacatattgccatacagcaacccc
attgctgtcttcacattccttgcggtttttggtgtggtcaccatcttgcaatgctttttg
atcagcaccatgttttcaaaggctaacctagcagcagcctgtggagggattatctacttt
accctgtaccttccttatgtcctctgtatggcttggcaggagtatacaacctactcaatc
aaaatcattgccagcctgctctccccagtcgcctttggctttggttttgactactttgct
caattcgaagagcagggaattggggtccagtggcataacctcttctcgagtccatcgaaa
ggcgatgagtacaacatcaccacatccatcatcctcatgatcattgacacattcctgtat
ggagttctaacttggtacattgaggcagttttcccaggacaatatggcattcccaagcca
tggtattttccttttaccaaatcctattggtgcggagatacaattcagaacattaagcag
actccatctgctaagaatacaaattcacaaatctgtgtggaagaggagccgagtcacctc
acacttggtgtctccattcaaaacctggtcaagatttaccgtaatggcaagaagttggca
gtcgatggactcagtctcagcttttacgaagggcagatcacatctttcctaggacataat
ggagctggcaaaaccactactatgtcaatattgaccggattgtttccgccaacatctgga
acagcttatattctgggaaaagatatctgttctgacctcgattccattcggcaaagcctg
ggtgtgtgcccacagcacaatgtcctttttgatttgcttactgtagaggaacatgtttgg
ttttatgcacgactaaaaggactgtcaaggagtgaggtgaagacagaggtggagcagatg
gtcttggatgtggggctgcccaacaaacgtaaagaaacaaccaacaagctttcaggcgga
atgcaacgtaaactttcagtggcccttgcatttgttggcggctcgaaagttgtcatcttg
gatgaaccaactgctggagttgacccttattcccgccgagggatatgggatctactgctg
aaatatcggcaaggtcggaccattatcctctctacacatcatatggatgaggcagatatg
ctgggagaccggattgccattatttctaatggcaagctatgctgttgtggatcatcattg
tacctaaagaaccaattaggaacaggctactacctcactctggtcaagaaagatttagag
ccatctctcagctcctgtagaaacagcagcagcaccatgtcctacttaaaaaaggaggac
agtgtttctcaaagcagctctgatgctgggcttggcagtgatcaagaaagtgataccatc
actatagatgtttcagccatttccaatctcatcttgaagcacattccaaaggctcgcttg
gttgaagatattggccatgaactgacttatgtgctgccttatgaggctgctaaagatggg
gcttttgtggaacttttccatgagattgatgacagactctctgaccttggaatttccagt
tacggaatttccgacactactctggaagaaattttccttaaggttgctgaggataatgga
gtggatacggaaacgtcagatggcatgattccagcttgccgaaaccggagatcgagattt
gtggacagacagagttgcttgagaccgttcactgatgatgctgctgacgttaatgactca
gatggtgatccagaggcccgtgaaacggacttcctgagtggaatggatgggaaaggttct
tactcagtaagaggctggaacctttttaggcagcagtttgtggccttgttctggaagagg
ttgatttatgcaaaacgcagccggaaaggaatctttgctcagatcgtactacctgctgtg
tttgtgtgtattgcactggtgttcagtctgattgtgcctccatttggtaaatatcccagc
ttagaactgcacccctggatgtatgatgaacagtatactttcattagtaatgatgctccc
ggaaatgagcacacagaaaaattgctcaactctcttgttaataagccagggttcggcact
cggtgtatgaaaggaaatcccattcttgataatccctgtgagcctgcagctgcagagtgg
atcactccttctgtatcggattctataatggatgtctttctcaatgggaattggacaatg
gataatccttcaccaacctgtcggtgtagtgataatactataaagaagatgcttcctgac
tgtcctgcagctgctggtggacttccacctcctcagattaaactgaactccacagacatc
ctccagaacctgtccggcagaaatgtgaccgattaccttgtgaaaacctatgcgcaaatc
attgggagaagtttaaagaacaaaatgtgggtgaatgaattcaggtatggaggattttca
cttgggggagaaaactctccgttgctaccatcacaggaagaagtcactcaagccatactc
catttaaaaaaggcacttgcattgacacagggtagtgcttctgaccgctttatgagccga
ctcttgaaatttatgtcaggattagacacgaaagataacgtaaagatttggtttaacaac
aaaggctggcatgccatcggagccttcctgaatgtcatgaacaatgctattctccgtact
cggttaggggaaggtgaagatcccagtgcatacggaatcaccgccatcaatcatcccctc
aatctgaccaaagagcagatctctgaggtggctctgatgaccacttccgtggatgttctg
gtttctatctgtgtgatctttgccatgtccttcgtgccggcaagtttcgttgttttcctg
attcaggagcgggtcaccaaagccaagcacatgcagttcatcagcggagtgaaaccagcc
atctactggctagctaactatgtgtgggacatgtgcaactatgtggttcctgccactctg
gtcattgttatatttatctgtttccaacaaaaatcatatgtgtcttcctcgaatctgccc
gtgctggctctgcttctcttcctctatggatggtccatcacacctttgatgtacccagca
tcatttgtgttcaggatccccagcactgcctatgtgatactaaccagcgttaatttgttc
attggtattaatggcagtgtggcaactttcgtattggagctgtttagcaacaataaactg
aatagcattaacgaagtcctgaaatctgtgttcctcatctttccccacttctgtttgggc
cgtgggttgattgacatggtgaaaaatcaggccatggcagacgccttagaacgatttggc
gagaatcgttttgtctccccactttcctgggatctagtaggaaggaacctgtttgctatg
gctgtggaaggagtggttttctttttcatcactgttctgattcagtacagattctttata
aaaccaaggcccacatctgtaaaacttccagttctaactgatgaagacgaggatgtggcc
aaggaaaggcagagggtcttgagtggtggatgtcaaaacgacatcctggaactgaaaagt
ctgacaaagatttacaggatgaaaaggaaccctgcagtggacagactttgtgttggaatc
ccaccaggagagtgttttgggctgcttggggtgaatggtgctgggaaaacaaccaccttc
aaaatgttgaccggagatagttatgtgacaggaggagaagctttccttaatggctacagt
attttatctaacatgcaagaagtccaccagaacatgggttactgtcctcagtttgatgcc
atcaatgagcttcttactggccgggaacatctagagctatatggactcctgcgtggaatt
cctgagaaagagatttgcaaggttgctgaatggggaatccgaaagctgggaattattcga
tatgcagataaaagggctggcaactacagcggtggcaacaagcgcaaactctcaaccgct
atggcactgcttgggggtcctcctgtattatttctggatgaacccacaacagggatggac
ccaaaggctcggagatttctgtggaacacaattcttagtattgtgaaagaagggagatca
gtggtcttgacgtcacacagcatggaagagtgtgaggctttgtgtactcgaatggccata
atggtgaatggcaaatttcgatgtcttggcagtgtgcagcatctcaaaaacagatttgga
gatggctatacgataattgtgaggatagttggtccaaacccagatctgagtcctgtggag
cagttcttcaagcgggcctttcctggcagcattctcaaggagaagcaccgcaatatgctg
cagtaccagctgccatcctatcaatcctccttatcaaggatctttagtattctctccagc
aacaaggagaaacttcaaattgaggactactctgtttcacaaaccacactagaccaagtt
tttgtaaattttgccaaggaccaaagtgacgatgacctctcaaaagacatgtctattcaa
agaaatgaaactgtcttagatgttgcactcctgaatacatttttacatgacaacagtgtg
aaggaaagctgtgtgtga
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integrated database retrieval system
