Entry |
|
Symbol |
arid2
|
Name |
(RefSeq) AT-rich interactive domain-containing protein 2
|
KO |
K11765 | AT-rich interactive domain-containing protein 2 |
|
Organism |
hoc Hemiscyllium ocellatum (epaulette shark)
|
Pathway |
hoc03082 | ATP-dependent chromatin remodeling |
|
Brite |
KEGG Orthology (KO) [BR:hoc00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132824847 (arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:hoc03000]
132824847 (arid2)
03021 Transcription machinery [BR:hoc03021]
132824847 (arid2)
03036 Chromosome and associated proteins [BR:hoc03036]
132824847 (arid2)
Transcription factors [BR:hoc03000]
Eukaryotic type
Helix-turn-helix
ARID
132824847 (arid2)
Transcription machinery [BR:hoc03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132824847 (arid2)
Chromosome and associated proteins [BR:hoc03036]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
132824847 (arid2)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
19:6554230..6697066
|
AA seq |
1815 aa
MKKMANSMGKMQPSDPRRKRQAFLEELRQFHHNRGTPFKKIPIVAGKELDLHALYTRVTS
LGGFAKVTDKNKWSQITEELNFPKGCPNAAFALKQYYLRYLEAYEKVHHFGEDDDEVSSG
NQRGPVPVGGVPSSYSYQQHILSDYIRQSYGLNTEFVTLSDYNKLVLSLMSGLPNEVDFA
INVCTLLSNGNKHIMQLEKDPRITTILLAHAGVFDDNLGTLSSVFGAEWKEKTGRDFVKF
WKDNVDDNEIRELIIFRNNGPQGTSIEIDMESSLFHPPHKVGINDVEGQRVLQIAVILRN
LSFEEGNVKLLAAHRTCVRFLLLCSHCQYASLKQLGLDTLGNVAAELQLDPLDFKSTHLI
FHTVTKCLLSCDKCLKIRGMEILGNLCRAEDNADLICEYVDQDSYKEIICHLTLPDMLLV
ISSLEVLYMLTELGEVPCTKIVSVEKSVDMLVCLVSVDIQSFESDAVKLIEYQSSNHQVI
SEIRPQAMEHLQHGPAHGVTASAVRVGSTLATPPGIEVDSEKFGCQWLSAHFETSLEGSI
SRLDLYSEYLSVCSKLARGGILTSTGFNKCLRSLFPTCIVKRIEDPNNSGQAQIHIVGIQ
RRAIPLPMQSHYQQSPTAPSIMAEITQNPAPSAQAMVSHFQRIPAGNLCANQPGSQMIYT
FQPSIPAHNVTKSSQDQTSLAQPHQNTAVTFVQSRTPITSETVKCTVVQSSTFSTHSGVT
VPYSLTGTNIPPGTVIQNHATTTTQSSVKITSSQQMLHHPQVFQQQLPGHQLSIPAVSSN
QVNTSAATTVTVLQQAVSHTHASIGRVQSTPAATVTVSQGQLLSGAVLHSVQTPRHQPKT
TSQQDAVLLAPQHYSSTSSPTVVSGAAVQNFQVSPGQVVAIAGVQSPPTPRMSFQTIAPK
PAGIPPQQVQSTIIQQQPQQSVHVIVSQPAQQGQSFAPAIHQILLTNPATIQASQTLHLA
GKAHVTPSTSPSSIPVNNTQVQVGLVTQPSTPQIQGPQTVSKMLSVKRQQQQQQHPQKQF
QVQIQSQQATTAVSQPPSGESSLIKQLLLPKRGPPTPGGKLILPAPQMPLPSNTRAPSPQ
VVYQVTPNQANNFGVQPQSQQLVVGHQNVQLVQGPIHSQGSVQTVPIPHMQILPGQLISA
SNTTALLQGTTGNQVTITVVPNTTFTAAAGNHGSGTQIIAPAGIAVSASQTGVGLQVQTS
PPTLTPQSEQIKSSESGISFTGDKIICQKEEEAKDTTDLHLHERKIEIMENPSCSESATA
TSNGELKESKTQATKLVNGKKHDNSHLPPSNSGNVQSEPIHCTMASNGPLTGVSQNVTNG
KLNVEYAGVQEIKKDLLKMPMVNGICDFEKGDGSHLSKSIPNHRASNHVENGDVAAKEQW
CKMDCNQQNTAKSGQLTKVHNGPVSVGNSSANCTVISSSVDQQISDTHSGLSNGPMTAGI
CSAVPPLQCSTSGVSVQSLLPHAPQGHCPPVLHQPGPVAVHSVQLYQTPTTNGSTDCQLL
KRPADCKDNTSGIPNKVGVRIVTISDPNNAGCSSTMVAVPVGSDSSTIAKVAMDNVSQQN
QHLPVISQGMVNQSPSLAVSSAPSPATHQINSQSLQHQVQSLHQHGELTRKPGQNFMCLW
QACRRWFESPSQVYYHAATEHGGKDVYPGACMWEACEHFPRQRFSFITHLQDKHCTKEAL
LTGLKKLEEQAQGGNQQTSNKQTPAGATSIAKAPKTIVNHPSAALVALRRGSRNLAFRGY
MDEKEGPITKHIRLTAALILKNVAKYSDCGRRLLKGHENQLSVLALSNMEASSTLAKCLF
ELVRLEQLQQPENKL |
NT seq |
5448 nt +upstreamnt +downstreamnt
atgaaaaagatggcaaattcgatggggaaaatgcagccttcagacccgaggagaaaaagg
caggcgttcctggaggagctgcggcagtttcaccacaacagagggacgccttttaaaaag
atcccaatagtggctggaaaggagctggatcttcacgctctctacaccagagtcaccagc
ctgggaggattcgccaaggtaactgacaagaacaaatggtcacagataacggaggagtta
aactttccgaaaggttgccctaacgcagcgtttgccttaaaacaatattacttacgttat
cttgaagcttatgagaaagtacatcactttggggaagatgatgacgaggttagttcaggg
aatcaacgaggacctgttcctgttggtggggtaccttcttcatacagttaccagcagcat
atattatcagattatattcgacaaagctatggacttaatacagagtttgtcacacttagt
gactacaataaattggtgctttcccttatgtctggactccctaatgaagtggattttgca
ataaatgtttgcactcttctctcaaatgggaataagcacatcatgcaacttgagaaggac
cccagaatcaccaccattttacttgcgcatgctggagtttttgatgataatttgggtacc
ttgtcttctgtatttggtgcagaatggaaagaaaaaacaggcagagattttgttaagttc
tggaaagataatgttgacgataatgaaatacgggagcttattatttttaggaacaatgga
ccacaaggtacgagtatagaaattgatatggaatcatctttattccatccccctcataaa
gtgggcatcaatgatgttgaggggcaacgtgtacttcagatagcagtaatccttcgcaat
ttgtcatttgaggaaggaaatgtgaagctattggcagctcaccgtacgtgtgtgcgtttc
ctgttgttatgttcccattgtcagtatgcttctctcaagcaactggggctggacacattg
ggtaacgtagcagctgagcttcaattggatcctcttgattttaaaagtactcacctaatt
tttcatactgtaactaaatgtctactttcctgtgacaagtgtttgaaaataagaggaatg
gaaatactaggaaacctatgtagagctgaagataacgcagacttgatatgtgaatatgta
gatcaggactcttacaaggagattatatgtcatctaactttgcctgatatgctgctggta
atctcctcattagaggtgctatacatgctgaccgaactaggagaagtaccctgcacaaag
atagttagtgtggaaaaaagtgtggatatgttagtgtgtcttgtgtcggtggatatccag
tcatttgagtctgatgcagtgaaattaattgaatatcaaagttctaaccatcaagtgatc
tccgaaatcagaccacaagctatggagcatttgcaacatggaccagctcatggcgtgaca
gcttcagcagtaagagttggctctacattggcaaccccaccaggaatagaagtagacagt
gaaaagtttggctgtcagtggttaagcgcacattttgagacatccttggaaggctcaatt
tcacgactggatctctattctgaatatctttctgtgtgcagtaaattagctcgaggtgga
attctgacatcaacaggatttaacaagtgtctgaggagtctatttccaacctgtatagta
aaacgaattgaagatcccaataacagcgggcaagcacaaatacacatagtaggtatccaa
agaagagctataccacttcccatgcagtcacactaccagcaatcaccaactgctccctcc
attatggcagagataacacagaatccagctccctccgcacaggcaatggtaagtcacttt
caaaggatacctgcaggaaatctttgtgctaatcagccaggatctcaaatgatctacaca
tttcaaccaagtattccagctcacaatgttaccaagtcatcacaagatcaaactagcttg
gcacaaccacaccaaaatactgcagtgacgtttgtacaaagcagaactccaattacgagt
gagacagtcaagtgtacagttgttcagtcttcaacatttagcactcattctggagttaca
gttccatattcattaaccggaaccaacataccgcctggaacagtgatccaaaatcatgcc
accacaacaacacaatcatcagttaaaatcacatcttctcagcaaatgcttcaccatcca
caggtctttcaacagcaacttcctggtcaccagctctccataccagctgtatcttctaat
caggtgaatacctctgcagcaacaacggttactgtattacagcaggctgtttctcatacc
catgcatcaattggcagagttcaaagtacaccagcagccactgtcactgtttcgcaagga
cagctgttatcgggtgcagtattgcactctgtacagacaccacgccaccagccaaaaaca
accagccagcaagatgcagttcttttggcaccgcagcactattcctctacttcaagtcca
actgttgtatctggtgctgccgtgcaaaattttcaagtctcaccaggtcaagtagttgca
attgctggtgttcaaagccctccaactcctaggatgagtttccagactatagcaccaaaa
ccagcaggaataccaccacagcaagttcagtctactataatacaacagcaaccccagcag
agtgtacatgtgattgttagtcagccagctcaacaggggcagagctttgcccctgccatt
catcagatattgttaacaaatccagctactattcaagccagccaaactcttcatctggct
ggaaaagcacatgtgaccccatcaacctcgccatcctctatacctgtcaacaatacacag
gtacaagtgggcttagttactcaaccatccacccctcaaatacaggggcctcaaacagtg
agtaagatgctatccgtgaagcggcagcagcagcaacaacagcatcctcaaaagcagttc
caggtgcagattcaatcccagcaggccactactgcagttagtcagcctccctctggggag
tccagtttaataaaacaattacttcttcccaaaagaggtcctcctactccaggtggtaaa
ctcatattgcctgctcctcaaatgcctctcccttctaataccagagctcctagtcctcag
gtggtctaccaagtaactcctaatcaggcaaataattttggagttcaaccccaaagtcaa
caattggttgttggccaccaaaatgtgcagcttgttcaaggtcccatccattcacaggga
tcagtgcagacagtgcccatccctcatatgcagatcttacccggtcaattgatctctgct
agtaacactactgctcttctccagggaacaactggcaaccaagttactattactgttgtg
ccaaataccaccttcactgctgcagctgggaatcatggaagcggaacacagatcattgca
cctgcaggaattgctgtcagtgcatcacaaacaggagttggtctccaagtgcaaacatct
ccacctacgttgacaccgcagagtgaacagataaaaagctcagaatctgggatttcattc
acaggtgacaaaattatttgtcagaaggaggaagaagcaaaagatacaacagatttacat
ctgcatgaacgtaaaattgaaattatggaaaatccttcctgttcagagagtgcgactgct
acatctaatggtgagttaaaggaaagcaaaacgcaggcaacaaaacttgtaaatgggaaa
aaacatgataattcgcatctacctccatctaactcagggaatgttcagtctgagcccatc
cactgcacaatggcctcaaacggacctttgacaggagtaagtcaaaatgtaactaatggg
aaactgaatgtagagtatgcaggagtgcaggaaattaagaaagatcttttgaaaatgcct
atggttaatgggatctgtgattttgaaaaaggagatggttcacacttgagcaaaagcatt
ccgaatcatagagcttccaaccatgtggaaaacggcgatgttgctgcaaaggaacaatgg
tgcaaaatggactgtaatcagcaaaacactgccaaaagtggtcagttgaccaaagtgcac
aatggacctgtttcagtaggaaattctagtgctaactgtacagtcatttcaagctctgtt
gaccagcaaattagtgacacacactcaggattatccaatggacctatgacagctggcatt
tgttcagcggtgcccccgcttcagtgctcaacttcaggtgtttctgtgcagtctttgctt
cctcatgctccccaggggcattgccctccagttctgcaccaacctgggcctgtagctgta
cattcagttcaactatatcagactccaacaaccaatggttcaactgattgtcaactttta
aaaaggccggctgattgcaaagataatacatcaggaataccaaataaagtgggagtaagg
attgttaccatcagtgatcccaataatgctggctgcagttcaacaatggtggctgtgcca
gtaggatctgattccagtacaatagccaaagtagcaatggataatgtgtcacagcaaaat
cagcatttgcctgttatttcacagggcatggttaatcagtccccatctttagcagtatca
tcagcaccatcaccagcaacgcaccagatcaattctcaatctcttcaacatcaagttcaa
tcattgcaccaacacggcgagctgacaagaaaacctggacagaatttcatgtgcctctgg
caagcatgcagaaggtggtttgaatctccatctcaagtatactaccacgcagcaactgag
catggaggaaaagatgtatatccaggggcatgtatgtgggaagcttgtgaacattttcca
cggcagagattctccttcattactcacttacaagataaacactgcacaaaagaagcactc
cttacaggactgaagaagcttgaagagcaagcacaaggtggaaaccaacaaacttccaat
aagcagacaccagctggagctacttccattgctaaagcaccgaagactattgtgaatcat
cccagtgctgcattagtggcattgcggcggggatctaggaaccttgcatttagaggttat
atggatgaaaaggaaggcccgataacaaaacacattcggttgacagctgccttaattttg
aaaaatgttgctaagtattcagattgcggtcgcagattactaaagggacatgagaaccaa
ttgtctgtactagcccttagcaacatggaagcttctagcactcttgccaaatgccttttc
gaacttgtacgtctagaacaattacagcaaccagaaaataaactctga |