Hemiscyllium ocellatum (epaulette shark): 132824889
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Entry
132824889 CDS
T09720
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hoc03009
]
132824889 (utp20)
Ribosome biogenesis [BR:
hoc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
132824889 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
132824889
NCBI-ProteinID:
XP_060695713
LinkDB
All DBs
Position
19:complement(18950945..19064416)
Genome browser
AA seq
2775 aa
AA seq
DB search
MKNKPTRHRTQNTFRFLTFSERLANVNIDIIHRIDRTGSYAEEVETYFYEGLEKWRDLNC
TDHFVNFYKEVYGKTQSFNQLVYHQKTVVESLKSHLQIRSSLAYQPLLDLVVQLARDLQG
DFYPHFREFFIIITSLLNTQDTELLEWIFTCLSYLYKYLWRLMVKDITDIYSLYSSLLGH
NKEHIRRFAAESFAFLMRKAPDHNVLFNFMFADLEQHSEKAEGVGQLLFDVCKGVQNTLH
SCAAKIFPAVLQKLGPVTELEAVLPWDKVGQAVHHMAKSFASYVDREHFDLVWSCLQRCV
LGLCDQLNCGDRQQGSDQIQRILQIYLVMVESGQGSKVTHPVELCETLIQMLQASQMTTS
CCEALLEVFSTLLKAQNITLPKALIGEASRKIYSCGFERKLILEFSEKIFNMCQFEQLFL
PNLLQYVEEQFALDLSAREETLGILVQLILVKAEPPTVGSMAFEKYPLHFAGPVQVNSSG
VENGGPVALVLDFILSLLHIPEAGERLDLAHSWAALVILPHVRPVQTEEVLDQVQLFFNW
LLVTLEENDSIDEGWMYVARQAVSTILSLTESSDVLSILPVECVRNLIKKSPSNPSALLL
GDLYYTRLALCGYSDLLSQDSLLDLFTELRPNLSTSVSKVRLLSLRIMNHFKVQLRERVE
DESDGDLQSVFAILLQAELVPATVHDYREKLLHLRKLRHDLVQPCLPEGPYDEVPLQHLI
GMLYINFSALWDPVIELIVSHARGMENKAFWSIYYEHLDQAARFTEKELKCELGEEMKDN
ITSDTPNILPDIIRGLYQDQLNLAMKSNERTDRTNFRFLLWKAMGDFADRVEPRSRELSP
LLLKFINNEYYPADLLVAPAEDIRKKQGADEKVTAVELQDGCSAVADGIEGPDELQFAVG
KKPKRAAVKQLIAHLKVFSKFSNPRSLYLEPKLKELYIQLLCHHCQDVQKIALECLLTYK
HPHMLPYRENLQRLLEDKSFKEEVIHFSIAEETTIVSAAHRPELIPIIMRILYGRMRSKT
GSKTQGRAAAGTRMVIVLNFLAGSLPQEIHLFLDLLLEPVHHFTQGSCLCAVLQSVKTLD
MSKILPLGRQQSLLNGIDVVMKKLGHLIQDYLSKLLQITLCMCASVSHILQQRDQIQPRC
INQLKYLRRLGINQIAAFFSDFESYAFTAEEIDALFHSVVWPQIGRLASEGQYAPTPLLK
LIHIWSKNSRFFPLLAKQLPDHPQLDVLTNVFALLSSKSIAEPTAAVVMDIVDSLLSMPD
FSPTAQASVLTVNDTAFPEPSTFAGESASMGICLILPHISTILRHLNKAVGNTERMKKKK
FQIQVSKDLSILSRISQFVQDKEQSTVLINLLMPYLFKPNTPQDTEIDILKTIQNLLQHC
SEPATFIKPLAALFSVIQNRLSRQTLCSIFQTLAELDSRLVYITETVTKLNAFDRQHLDD
IDFDERLSAFQLTTKCIREMGTLDMEYLIAVMHNCFHSIQLGEMTLSDSATLCLTEIIRR
VASVDCSEEEYKEVINRTLLETLRNCLKSKIESVQQEYTTLLCCLIRTFPQRPEFQDLVQ
LTDHDPDMDFFENMKHIQIHRRARALKKLAKHLDEKKITLSSKSLVNYILPFATSTLFSE
NMLKYENMTTASVELVGAACKHLSWSPYIYYLKRYIHVLQTGQINQKLAVSLLLSVLQAF
HFDPESLRKEFEAVQAIENANMEKGDEGNVAEAMELEGDVDEEKEQSAETLNEGSTVCDE
GAEGEDVPVKQVKKPVTPEPKNNEELQNLIEHIQVTVTNSILPKLQKCLIAKVQRDEQHK
LVRSKIVNDEELVRIPLAFTMVKLMQTLPKETMDSNLPSILIKVCMLLRNRAQEIRDVAR
NTLTKIIETLGPEYLLYLLKEMQSALTKGYQVHVLTYTVYMLLKSLVPRLNSGDLDPCMD
ILIEIFNHELFGEIAEEKEVKGIISKVMEARTSKSYDSYQILARFVGRAQVTKLIRPLKE
ILESTTILKQARKVQEAFRRIVTGLLLNKEMTADSILLLSHGLVTESLPLMTQRTKGQHK
KPEASRVGLKPQSCLLLPPTPSRTGEKAATSTKTNMHILVNTGLRLLHMSLKRSKVNSSE
DHILGMLDPFVQLLIDCLQSMHVKVITSALQCLTWILKFPLVSTETLADQLTQQLFVLLK
DYARAGAGRGDNFHLVVNCFKSITILVKNMTGHMITGKQLQILLGYAEEDIYDSSRQATA
FGLLKAILSRKLLVPEMDEVMQKVAKLAVTGQSDQVRVQCRQVYLKFVLDYPLGSKLKSH
LEFIVAQLSYEHDIGRESALEMLAYIFQSFPQGLLHQHYALFFIPVTLMIVNDDSPSCKK
MAALVAQSLLSKVDEKHKDLMFSLVLTWFQSEKISHRRLAAHTCGLFAETEGITFEKRLG
IILPILEAAIDPGNFQDIHEEVEEKATDRLLFSLLTLIVKLVKNCNLVQLLKPSPVLTTI
WGHIQAHLWHPHSWVWLTSAQLFGLLFASYQPEELVAKWNTGKALITAQSSMETPAAQFL
LEELGRKTKLLALAFCHQLQSKFLDLTLGEQVIKNLLFVAKVIFLLESVDCGDGKVDEKT
EESEDEMGAEEETAGKVVSDGAKGKRATLMWLIRKLCTLAKREAAHSPKIPLKRTCVFKF
LGAISVNLGMEGVKPYLPVIIAPLYRELNSTYAEQDSTLRNLSQEIIELLKKLVGLETFS
LGFAAVQKQASQKKALRKRQKALQTVANPDIAARKKLKKHKNKAEAKKRKIEVLRPGYKA
KKARSGTLKDLAIVE
NT seq
8328 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaaacccacccggcaccggactcagaacacgttccggtttctcaccttctcg
gaacggttagcgaatgtgaatattgatataatccatcggattgatagaactgggagctat
gctgaggaagttgaaacctacttttatgaaggcctggagaaatggagagatcttaactgc
acggatcactttgttaacttttacaaagaggtatacggaaaaacccaatcttttaatcag
ttggtataccatcagaagacggtggtagaaagcttgaaaagtcatcttcaaatcaggagc
agcctggcataccaacctttacttgacctcgtggtacagctggccagagatctgcagggg
gacttctatccacacttcagagagttctttataattataacctccttgctgaacacacag
gacacagaactgttggaatggatcttcacctgtctctcctacctgtacaaatacctctgg
agacttatggtcaaggacataacagacatttacagtttgtatagttcacttttgggccac
aataaggagcatatcagacgttttgcagctgaaagttttgctttcttaatgagaaaggct
cctgatcacaatgtcctcttcaacttcatgtttgctgacctggagcaacactctgagaag
gccgagggagtgggccagctgcttttcgatgtgtgcaaaggagtccaaaataccttgcac
tcatgtgcagccaaaatctttcccgctgtcttacaaaaactgggacctgtcacagagtta
gaggcagtgttaccatgggataaggttgggcaagctgttcaccacatggccaagtcattt
gcatcctacgttgacagggaacatttcgatttagtctggagctgcttacaaagatgtgtc
ctggggctctgcgaccaactaaactgcggggacaggcagcaaggctctgatcaaatccag
aggatactgcagatatacctggtgatggtggaaagtggacaggggtcaaaggttactcat
ccagtcgagctttgtgagaccttgatccagatgctgcaggcttcacagatgaccacatcc
tgctgtgaggctcttcttgaggtattctccaccctcctgaaggctcagaatattactctg
ccaaaagcactgattggagaagcttctaggaagatttacagctgtgggtttgagagaaaa
ttaattctggagttctctgaaaagatatttaacatgtgccagtttgaacagctgtttctg
ccaaacttgctgcagtatgtggaggaacagtttgcacttgatctatctgctcgggaagaa
actctgggaattttggtgcaactgattctggtcaaagctgagcctccgactgtcggatca
atggcatttgaaaagtatcctcttcactttgctgggccggtgcaagtcaattcgagtgga
gtggagaatggtgggccggttgctttggtgttagacttcatcctttcattgctccacata
cctgaagctggagagagattggatcttgcacatagttgggctgctctcgtcattcttccc
catgtcaggcctgtgcaaacagaggaggtgttggaccaggttcagttattttttaactgg
ctactggtaacccttgaagaaaatgattccattgacgaaggatggatgtatgttgctcgt
caagcagtcagcaccattctgagtctaactgagtcttcagatgttctcagcattcttcca
gtggaatgtgtaaggaatttgattaagaagtcaccatctaacccctctgctcttttgctg
ggtgatctgtactatactcggttagcattatgtggctacagtgatctcctttcacaagac
tctctgcttgacctgttcacagaacttcggccaaatctttccacatctgtttccaaggtg
cgacttctctcactgaggattatgaatcactttaaagtgcagctacgcgaaagagttgag
gatgagagtgatggagatcttcagtctgtctttgccatcttacttcaagctgaacttgtc
cctgccactgttcatgactacagagagaagttactgcacctgagaaagctaaggcatgat
ctggtgcagccgtgtctccctgaggggccgtatgacgaggttcctcttcaacatttgata
ggaatgctttatataaacttcagtgcactgtgggacccagtgatcgaattaattgtttct
catgcacgtggaatggaaaacaaagcattctggtctatctattatgaacatctggaccag
gcagctcgttttacagagaaggaattgaaatgtgaattgggagaggaaatgaaagacaac
attacatcagacactccgaatattctgccagatataatcagaggattgtaccaggatcag
cttaatttggcaatgaaatccaatgagaggacagatcgcaccaacttccgcttcttgctt
tggaaagcaatgggtgacttcgctgacagagtagaacctcggtcacgggaactctctcct
ttgcttctaaaatttattaacaatgaatattacccagcggacttgttggttgccccagct
gaggacatcaggaagaagcagggggctgatgagaaagtgactgctgtcgaactgcaggat
gggtgcagtgcagtcgctgatgggattgaaggtcctgacgaactccagtttgctgtgggg
aagaagcccaagagggcagctgtaaagcaattgatcgctcacctgaaagttttctccaag
ttttccaacccgaggtcgctatacctggaacccaagctgaaggaattgtacatacagctg
ctgtgccatcattgccaggatgtgcagaaaattgccttggaatgtctgctcacctacaag
cacccacacatgctgccctacagggaaaacctccagcgactgctggaggacaagagtttc
aaagaagaagtcattcactttagtattgcagaagaaacgaccatcgtgtcagccgcacac
agacctgagctcatcccaattatcatgaggattctttacggacgcatgaggagcaaaaca
gggagcaaaacccaaggccgagcagcagcagggacccgcatggtcattgttctaaatttc
ctggctggctcgttacctcaggagatacacctcttcctggatctgctccttgaaccagta
caccattttactcagggatcctgtctatgtgcagtgttacagtcggtaaagactttggat
atgtcaaagattttacccctaggacgtcagcaaagtctactgaacggcattgatgtggtg
atgaaaaagctgggccatctaatccaagactatctgtcgaaactgctccagatcaccttg
tgcatgtgtgcgtcagtgtctcatattcttcagcagcgagaccagatccaaccgcggtgc
ataaaccagctaaaatatttgagacgtctgggaataaatcagattgctgctttcttttct
gactttgagtcctacgctttcacagcggaagagattgacgctttgtttcacagtgttgtg
tggccacagatcgggagactcgcttctgaagggcaatatgcaccaacccctctcctgaaa
ctgattcatatctggagcaagaattccaggttcttcccactccttgcaaaacagcttcct
gatcacccacagttggatgttctgaccaatgtctttgccttgctgtcatctaagagcatt
gcagaacccacggcggcggttgtcatggatatcgttgacagcctgctgagcatgcctgac
ttctcgccaacagcgcaagcaagcgtcctgactgtgaacgacacagcctttccagaacct
tccacctttgcaggagaatcggcaagcatggggatatgtcttattctgcctcatatttcc
accatcctccggcatcttaacaaagctgttggaaatacagaacgaatgaagaagaaaaaa
ttccaaatacaagtcagtaaagatttgagcatcctttcgaggataagtcagtttgtacag
gataaggaacagagcactgttctgatcaatctcctgatgccgtatctctttaagccaaac
acaccacaggatactgagattgacatcctgaaaaccattcagaacctcctgcagcattgc
tctgagcccgccacgttcatcaagccactggctgcccttttctctgtcattcagaacagg
ctgtctcggcagactctctgctccatcttccagaccttggctgaactggacagcagactg
gtgtacattacagaaactgtcactaagttaaatgcctttgatcgacaacatcttgacgac
attgattttgatgagcgcctgtctgcattccaacttaccactaaatgtatccgagagatg
ggaacattggatatggagtatctgattgcagtcatgcacaactgcttccattccattcag
ctgggggagatgactcttagtgacagtgcgacactttgcttgactgagattatccgaaga
gtggcttctgttgactgctcagaggaggaatataaggaagtaatcaaccgcactttactg
gagaccttacggaattgtctcaaatcaaaaattgagagtgttcaacaggaatacacaacg
ctactttgctgcttgatccggacattcccccaaagaccagaattccaggacctggtgcag
ctaacagaccatgatccggatatggacttctttgagaatatgaagcatatacagatccac
aggagagctcgtgccctgaaaaaactagcgaagcatcttgatgagaaaaagattacgttg
tcctcaaaatctttggtgaattacatcctgccatttgctacttcaacactgttcagtgag
aacatgctgaagtacgagaacatgaccacggcatctgtggaacttgttggagctgcctgc
aagcatctctcatggtcaccatatatttattaccttaaacgatatattcacgttctgcaa
actggacagatcaaccagaaacttgcagtcagtttgctactctcagtgttgcaagccttt
cactttgacccagagagcctacggaaggagtttgaagctgttcaggcaattgaaaatgca
aatatggagaaaggagatgagggaaatgtggctgaagccatggaattggaaggtgatgtc
gatgaagagaaggaacaatctgcagaaacattaaatgaaggtagcacagtgtgtgatgaa
ggtgcagagggagaagatgtccctgtgaagcaggtgaagaagcctgtgacccctgaaccc
aaaaacaacgaggagctgcaaaatctgattgaacacatccaagtgactgtcaccaacagc
atcctacctaagctgcagaaatgcttgattgcaaaggtgcaaagagatgaacaacacaag
ttggtgagatcaaaaatagtcaatgatgaggagttggtgcgtattccgctggcttttacg
atggttaaactgatgcagactcttcccaaggaaaccatggactccaatttaccaagcatc
ctcatcaaagtctgtatgctgttgagaaaccgagcgcaggagatccgagatgttgctcgc
aacaccctgactaaaatcattgagactctgggcccagaataccttctgtatctcctcaaa
gagatgcagtcagctttaaccaagggctatcaggttcatgttttgacctacacggtctac
atgctgttgaagagtctcgtacccagacttaacagtggagatttggacccttgtatggac
attctcattgagatttttaaccatgaactgtttggtgaaattgcagaagagaaagaagtg
aagggaattataagcaaagtgatggaagcgaggacaagcaagagctatgattcctatcag
attctggctcggtttgtgggaagggcacaagttactaagctgatccgtccacttaaagag
atattagagagtacaaccatccttaagcaagctcgcaaggttcaagaagcatttcgtcgc
attgtgactggtctgttactgaataaggaaatgacagccgactccattctcttattaagc
cacggtctggtgacagagagcttgccattgatgacacagagaaccaaaggtcaacacaag
aaacctgaagcatcccgtgttggactgaagccccagagttgcctcttgctgccccccacc
ccaagccgtacgggtgagaaagcagctaccagcaccaagaccaacatgcacattctggtc
aataccgggttgaggttgctgcatatgagcttgaagagatcgaaggtgaattcttcagaa
gatcacattttgggaatgcttgacccatttgtgcagctattgattgactgcctccagtcc
atgcatgtaaaggtgatcacttctgccttgcagtgcctcacctggatattgaaattccca
ttggtgtccacggaaactctggctgatcagctgacccagcaactttttgtgttactgaag
gattatgctagggctggagcagggaggggagacaacttccacctggtggtgaattgtttc
aagtcaattactatcctcgtgaagaacatgacaggacacatgataactggcaaacagttg
cagattctgttgggatatgctgaggaagatatttatgactcatcacgtcaggcaacagca
tttggtcttctgaaagcaattctctcaagaaagctgcttgttccagagatggacgaagtg
atgcagaaagtggccaaacttgctgtgactggacagagtgaccaggtccgagtgcagtgt
cgtcaggtttatttgaagtttgttcttgattatcccctgggaagtaaactgaagtctcac
cttgagttcattgtggcacagctttcctatgaacatgatattggaagagaatctgcattg
gaaatgctagcttacatcttccaatcctttccacagggtctgcttcatcagcattatgcc
cttttcttcatccctgtcactctgatgattgtgaatgatgattcaccgagctgcaagaag
atggcagctctggtagctcagtcgttgttgagcaaggtggacgagaagcacaaggacctg
atgttttcgttggtcttgacgtggttccaaagtgaaaagatctctcaccgtcgactggct
gcccatacttgtgggcttttcgctgaaactgaaggaatcacctttgagaaacgtcttggg
atcattcttccaatccttgaagccgcaattgatcctggaaatttccaagatatccatgag
gaagtggaagagaaagccacggaccgtttgctgttcagcctcttgactctgattgtgaaa
ctggtgaagaattgcaacttggtccagctgctcaaaccaagccccgttctcaccactatc
tggggtcacatccaagctcacctgtggcaccctcactcctgggtgtggctcacttccgcc
cagctgttcggattgctgttcgcctcctatcaacctgaagagctggtggccaagtggaac
actggcaaggcactgatcacggcacagagttccatggagacgccagcggcacagttcctg
ctggaagagctgggcagaaagaccaaactcttggctttagccttttgtcatcagctgcag
tccaagttcctggatctcacgctgggtgaacaggtgataaagaacttgctgtttgtggcc
aaagtcatcttcctcttggagtctgttgactgtggagatggaaaggtggatgaaaagaca
gaggagagcgaggatgaaatgggagccgaggaagagacggcaggaaaagttgtgtctgat
ggtgccaaagggaagagagcaaccctgatgtggctgatcaggaagctctgtactcttgcc
aagagagaagcagctcattccccgaaaatacctttgaagaggacatgcgtctttaagttc
cttggagcaatctccgtaaaccttggaatggaaggagtgaagccttatctcccagtaatt
attgcacctctttacagggaattgaacagtacttatgcagagcaagactcgacattgagg
aacctttcccaggagatcatcgagctgctgaagaaactggtcgggttggaaacgttctct
ctgggctttgcagccgtgcagaagcaggccagccagaagaaagctttgcggaaaagacag
aaagctctgcagacggtggcaaacccggatattgccgcaaggaagaaactgaagaagcac
aaaaataaagcggaagccaagaaaagaaaaattgaagtccttcgaccgggctacaaggcg
aaaaaggcccgaagcggcacgctcaaggacttggccatagtggagtga
DBGET
integrated database retrieval system
