Hemiscyllium ocellatum (epaulette shark): 132824890
Help
Entry
132824890 CDS
T09720
Symbol
cpsf6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03015
mRNA surveillance pathway
hoc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132824890 (cpsf6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132824890 (cpsf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132824890 (cpsf6)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
132824890 (cpsf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
132824890
NCBI-ProteinID:
XP_060695714
LinkDB
All DBs
Position
19:19542230..19584254
Genome browser
AA seq
555 aa
AA seq
DB search
MADGVDHIDIYADVGEEFNQETEYSGHDQIDLYDDVISPSANNGDAPEDRDYMDSMPQSV
SDDGGKTPNSLGPNIVYTYTGKRIALYIGNLTWWTTDEDLTEALHSMGITDLLEIKFFEN
RANGQSKGFALICVGSESSSKKLMDMLPKRDMHGQNPIVTPCNKQSLSQFEMQSRKSTQS
GQMSGEGKAGPPGANSRLAFSQSGRGRGRFPPSGPGGDRFPGPSGPGGPPPFPGQGPPRP
PPGPPGPPGPPGPPPPGQGLPPPLGGPPNRGDRPPPPVLFPGQPFGQPPMGPLPPGPPPP
VPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPIGPPISLAPPPHLPGPPPGAPPPAPHVNP
AFFPPPASNVIPSSDSRGPPPSDPYGRPPPYDRGDYGPAGRDMDSSRTPLSEAEFEEIMN
RNRAISSSAISRAVSDASAGDYGSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHG
IESKSYGSGSRKRERSRERDHSRSREKSRRHKERSRSRDRHDDYYRERSRERERHRDRER
DRDRERDREREYRHR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggtgtggatcacatcgacatctacgccgatgtcggcgaagagttcaatcag
gagacagaatacagtggtcatgatcagatagatttgtatgatgatgtcatatcaccatct
gccaataatggagatgcaccagaagatcgtgattacatggatagcatgccacagtctgtc
tctgatgatggtggcaaaactcctaattcattgggcccaaatattgtatatacgtatact
ggcaagagaatagctttgtatattggaaatctgacttggtggaccacagatgaggatttg
actgaagctctccattcaatgggcataactgatcttttagaaatcaaattctttgagaac
cgggctaatggacagtcaaaggggtttgccctcatttgtgtgggatcagaaagttcatcc
aaaaaactgatggatatgctgcccaaacgagatatgcatggacagaatcctatcgtcacg
ccatgcaataaacagtcactcagtcagtttgaaatgcagtctagaaaatctactcagtct
ggccaaatgtcaggagaagggaaagctggcccgcctggagcgaacagtcgattagcattt
tctcagagtggaagaggacgtggtcgtttcccaccatctggccctggtggggacagattc
ccagggccttctggaccaggagggcctccaccttttcctgggcaaggtccaccacggcca
cctccaggtcctcctggtccaccaggccccccgggtccgcctccacctggacaaggtctt
cctcctccattaggtgggccaccaaaccgtggtgatcgtccgccgcccccagttctgttt
ccaggacaaccgtttgggcaacctcccatgggaccactccctcctggtcctccccctcct
gttccaggctacggtcctccccctggcccccctcctccccaacaagggccacccccacca
cctggtcccttcccaccacgtcctccaggcccaattggcccaccaattagtcttgctcca
cctccccatctccctggaccaccacctggtgcaccacctccagcccctcatgtgaatcct
gctttcttcccaccaccagcaagtaatgtaattccctcatctgacagccgtggacctcct
ccatcagatccatatgggcgccctccaccatatgatagaggagactatggacctgctggc
agagacatggattcttcaaggactccactgagtgaagcagaatttgaggaaatcatgaat
cgaaacagagccatttctagtagtgcaatatcaagggctgtgtcagatgctagtgctggt
gattacgggagtgccattgaaaccctggttactgcaatttctttgataaagcaatctaaa
gtatctgcagatgaccgttgcaaagttctcataagttctctacaggactgtctccatgga
atagaatcaaagtcatatggttctgggtcacgaaaacgtgaacgttcacgtgaaagggac
cacagtagatcaagagagaaaagcagacgccacaaagagcgctcacgaagccgtgaccga
catgatgactattaccgtgaaagaagtagagagcgggaaaggcatcgtgatcgtgaacga
gatagagacagagagagagacagagaacgagagtatcgtcatcgttaa
DBGET
integrated database retrieval system
