Hemiscyllium ocellatum (epaulette shark): 132824942
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Entry
132824942 CDS
T09720
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04150
mTOR signaling pathway
hoc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
132824942 (lrp6)
04150 mTOR signaling pathway
132824942 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132824942 (lrp6)
Membrane trafficking [BR:
hoc04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
132824942 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
SGL
DUF5050
EGF_LRP2
EGF
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
132824942
NCBI-ProteinID:
XP_060695820
LinkDB
All DBs
Position
19:complement(38935506..39111844)
Genome browser
AA seq
1609 aa
AA seq
DB search
MGTALRNLLLCSVCSLIRGAPLLLFANRRDLRLVDAAGGKTNATVVVAGLEDAAAVDFIF
ADDLVYWTDVSEEAIKLIFLNQTGNSQNVVISGLVSPDGLACDWLGKKLYWTDSETNRIE
VANLDGSLRKVLFWQDLDQPRAITLDPARGYIYWTDWGEVPKIERAGMDGTTRSIIIDSN
IYWPNGLTLDYEEEKLYWADAKLSFIHRSNFDGSLRQVVVEGSLPHPFALTLFGDTLYWT
DWNTHSIHACNKYTGEYRREVHSNIFSPMDIHVFNQQRQPNATNPCGSNNGGCSHLCLMS
PIKPFFQCACPTGVQLLEDGTMCKDGASELLLLARRTDLRRISLDTPDFTDVILQLDDIR
HAIAIDYDPVEGYIYWTDDEVRAIRRAYLDGSGSQFVVTSQINHPDGIAVDWVARNLYWT
DTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPMSGYMYWTDWGEIPKIERATLDGSD
RVILVNTSLGWPNGLALDYKERKMYWGDAKTDKIEVMNCDGTGRRVLVEDKLPHIFGFTL
LGNYVYWTDWQRRSIERVDKRSAEREIIIDQLPDLMGLKATNVHQILGTNPCAEDNGGCS
HLCLYRPQGVRCACPIGLELIRDMKTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTG
VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSSLEHVVEFGLDYPEGMAVDWLGKNLY
WADTGTNRIEVARLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG
TGRITLVPNVGRANGLTIDYAERRLYWTDLDTSLIESSNMLGLDREVIADDLPHPFGLTQ
YQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQGGWNECASSNGHC
SHLCLAMPTVGYVCGCPAHYYLNVDNKTCSPPTSFLLFSQKNAINRMVIDEQQSPDIILP
IHSLRNVRAIDYDPVDKHLYWIDSRQNVIRRAQEDGTQSFTVVTSAIPNQNLDMQPYDLS
IDIYSRYIFWTCEATNVINVTRLDGKPIGVVLRGEQDRPRAIIVNPERGYMYFTNLQDRS
PRIERAALDGTEREVLFLSGLSKPVALAIDNKLGKLFWADSDLRRIESSDLSGANRIVLE
DANILQPVGLTIFGNHLYWIDRQQQMLERIEKTNGNSRTKIQARIAQLSDIHAVKELDLE
EFAEHPCAQDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCAPDHFTCATGE
IDCIPLAWRCDGYPECDDQSDEQNCPVCSDSQFQCASGQCIDAVFRCNGETNCQDQSDEQ
KCEVLCAMDQFQCATGQCIAKHKRCDHNGDCTDNSDELACYPTEEPTPQPTSTIGSIIGV
ILSVFVIGAIYFICQRVLCPRMKGDGETMTNDFVVHGSASVPLGYVPHTNSLPGSLQGMS
RGKSVMSSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPMLNPPPSPATERSHYTM
EFGYSSNSPSTHRSYSYRPYAYRNFAPPTTPCSTDVCDSDYTPGRRIATTKCYSDLNYDS
EPFPPPPTPRSQYLSAEENYESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atgggtaccgcgctgaggaatttgctgttgtgcagcgtttgctctctgataaggggtgca
ccacttctgttgtttgcaaatcgacgagatttgaggttggtagatgctgctggtggcaag
actaatgccacagttgtcgttgctggtttagaagatgcagctgcggtggattttatattt
gcagatgatcttgtatactggactgatgtgagtgaagaagcaatcaaactgatttttcta
aaccagacagggaactcccagaatgtagttatatcaggacttgtatcaccggatggtctg
gcttgtgattggctggggaaaaagttgtattggacggactctgaaactaatcggattgaa
gttgctaatttagatggatcattgcggaaggtcttattttggcaagatctcgaccaaccc
agggcaatcacgttggacccagcaagggggtatatatattggacagactggggagaagtg
ccaaagattgaacgagctggaatggatggtacaacacgatcgattataattgacagtaac
atttattggccaaatggactgacattggattatgaagaagagaaattatattgggcagat
gctaaactgagcttcattcaccgatcaaactttgatggaagcttgcggcaagtagtggtt
gaaggctcacttccacatccattcgctttaacgttgttcggagacactttatattggacg
gattggaacactcattccattcacgcatgcaacaaatatactggagagtatcgccgggag
gtgcacagcaatattttctctccaatggacattcatgtatttaaccagcagagacaacct
aatgctacaaacccatgtggcagcaataatggtggttgttcccacttgtgcctgatgtct
ccaatcaaaccattctttcagtgtgcctgtccaactggtgtccagctactagaagatgga
acaatgtgtaaagatggtgcctctgaattattgctgttggctcgacgaactgacttaagg
cggatatctttagacactcctgattttacagatgtcatcttacagctggatgatatccgc
catgcaattgctatagattatgatccggttgaagggtatatatactggactgatgatgaa
gtacgcgctatcaggcgtgcttatctggatggctcaggaagtcagtttgttgtgacctcc
caaattaaccaccctgatggcattgctgtggattgggtagcaaggaacctttattggact
gatactggcacagaccgtattgaagtaacgagactgaatgggacaatgcgcaagattcta
atttctgaggatctggatgagccaagagcaattgtgcttgatccaatgtctgggtacatg
tactggacagactggggagagattccaaagatagaacgtgccactttagatggatcagac
agagttatccttgttaacacttcattgggctggccaaatggtctagccctggattacaaa
gaaagaaaaatgtactggggagatgcaaaaactgataagatagaggtaatgaactgtgat
ggcactggaagacgggtccttgttgaggataaactgccacacatctttggttttactttg
ttgggcaattatgtttactggacagactggcagcgccgtagcattgaacgtgttgacaaa
agatctgctgaacgagagataatcattgaccagttgcctgatttgatgggcttaaaggcc
acaaatgttcatcagatattgggtaccaacccatgtgcagaagataatggtggatgcagt
cacctgtgtttgtacagacctcagggtgtgcgttgtgcctgtccaataggtttggagctc
atcagggatatgaaaacctgcatagtacccgaagctttcctccttttctctcggagagca
gacatcagaaggatttcactcgaaacaaacaataacaatgtggctattccactgactggg
gtaaaggaagcttctgctctggatttcgatgtgactgacaaccggatttactggacggat
attagcctgaagaccattagcagggctttcatgaatggcagttccctggagcatgttgta
gagtttgggcttgattaccctgaagggatggcagtagattggctggggaagaacttgtac
tgggctgatactggaaccaatcgaattgaagttgcaagactggatggacagcacagacaa
gtactagtgtggaaagacctagacagccccagagctttggcactggatcctgctgaaggg
ttcatgtattggacagaatggggcggcaagccaaagatagatagggctgccatggatgga
acagggcgtatcactttggtaccaaatgttggacgagcaaatggactaactattgactat
gcagagcgacggctttattggacagacctagatacaagtctcattgaatcctccaatatg
ttgggtctcgaccgtgaagttattgcagatgatttgcctcatccatttggtttaacacag
tatcaagactacatttactggacagattggagccgccgcagtattgaacgagccaataaa
acgagtggccagaatcgcaccataattcaaggccacttagattatgttatggacatactg
gtatttcattcttcaaggcaaggtggttggaatgagtgtgcttcaagcaatggacattgt
tctcatttgtgtttggctatgccaaccgttggctatgtttgtggctgccctgctcactac
tacttgaacgtggacaacaaaacttgtagtcctccgacttcgtttctgctcttcagtcaa
aagaatgcaattaaccggatggttattgatgaacaacagagcccagacatcattcttccc
attcacagtctgagaaacgtcagggccattgattatgatcctgtggataaacatctgtac
tggatcgattctcgtcaaaacgtaattaggcgagcacaggaggatggaacccagagcttt
actgttgtaaccagtgcaattcccaaccaaaatttggacatgcagccttatgacctcagc
attgatatctacagtcgttacatcttttggacctgcgaggcaactaatgtaataaatgta
acacgattggatggcaaaccaataggtgtggttttaagaggagaacaggacaggccaagg
gcaatcatcgtaaatccagagagggggtatatgtatttcactaatcttcaagatagatca
ccaagaatagagcgtgctgcattggatggtacagagcgtgaagttctcttcctcagtgga
ttaagtaaaccagttgcactcgctatcgacaacaagcttggcaaactcttctgggctgac
tctgatctgcgtcgcatagaaagcagtgacttatcaggtgcaaatcgaattgttttggaa
gatgccaacatacttcaacctgtaggtctgactatatttggtaaccacttgtactggatt
gacaggcaacagcagatgcttgagagaattgagaagacaaatggtaacagtcgtactaag
attcaagctcgtatagcacaactgagtgacattcatgccgtgaaagaactggatctagag
gaatttgctgaacatccttgtgcccaagataatggtggctgctcccatatatgtattgta
aagggagatggtactacccgttgttcctgtcctgttcaccttgtattgcttcaagatgaa
ctgtcctgtggagagcccccaacgtgtgcaccagatcacttcacttgtgctactggtgag
attgattgcattcctttggcttggcgctgtgatgggtatcctgagtgtgatgatcagagc
gatgagcaaaactgtccagtatgttcagacagtcagttccagtgtgccagtggacagtgt
atagatgctgtcttcagatgtaatggagagactaattgccaagaccaatctgacgaacag
aaatgtgaagttctgtgtgctatggatcagtttcaatgtgccactggacagtgcattgcc
aagcataaaagatgtgatcataatggagattgcaccgacaattcagatgaacttgcctgc
tatcccacagaagagcctacccctcaacctacaagcaccattggttcaattattggtgtc
atcctttctgtctttgtgattggagctatatactttatttgccaacgtgttctgtgccca
cggatgaaaggcgatggagaaacaatgacaaacgattttgttgtacatggatctgcttca
gtgcctctcggttatgtgccacatactaattccctcccaggatcacttcaaggtatgtcc
cgtgggaagtctgtgatgagttccctaagtattatgggtggaagcagtgggccaccatat
gacagggctcatgttacaggggcctcatccagcagctcttcaagtacaaaaggcacttac
ttccctcctatgctgaatcctccaccatcaccagctactgaacgttcacattataccatg
gaatttggttactcctccaatagtccttctactcacagatcatacagctacagaccatat
gcatacagaaattttgctcctcctactactccttgcagtactgatgtctgcgacagtgac
tacacccctggaaggagaattgctacaacgaaatgttatagcgatttgaactatgactct
gaaccattccctccgcctccaactccacggagccagtatttgtccgctgaggagaactat
gaaagctgcccaccttctccttatacagaaaggagttactctcatcatctttatccaccc
cctccctccccatgtacagactcctcatga
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integrated database retrieval system
