Hemiscyllium ocellatum (epaulette shark): 132824958
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Entry
132824958 CDS
T09720
Symbol
mkrn1
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hoc04121
]
132824958 (mkrn1)
Enzymes [BR:
hoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132824958 (mkrn1)
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132824958 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-CCCH_3
zf-RING_5
zf-CCCH_PARP12
zf-rbx1
zf-C3HC4_4
Misat_Tub_SegII
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
132824958
NCBI-ProteinID:
XP_060695858
LinkDB
All DBs
Position
19:43965016..44026811
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AA seq
460 aa
AA seq
DB search
MAEAAASMGTAAAAAVTLAGGGGGGSGIGWTKQVTCRYFMHGVCKEGNNCRYSHDLTTSK
PSLICKYFQKGCCTYGDRCRYDHVKPSNQGLSEVQSGPTPLISKDSATASASKLTPLTKL
NGEMSTKTVIEESNPATSSNLEDWVNAAEFIPGQPYCGRTTSTYPETRNEDLIIEENFED
SQTEDVKKQMCPYAALGECRYGVNCVYLHGDVCDMCGLQVLHPIDASQRSDHIKACIEAH
EKDMELSFAIQRSKDIICGICMEVIYEKTNASERRFGILSNCSHTYCLNCIRKWRSAKQF
ENKIVKSCPECRITSNFVIPSEYWVEDKEEKQKLIKKYKEAMSNKACRYFDQGRGTCPFG
SNCFYKHAYPDGRLEEPQPPRKPVASVGRYRNQRRTHFWNFIEERENTDSYENDEMVTFE
LGEVLLMLLADGHDDDFSDTDDEWDLFHDEMDVDYYEFDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcggcatccatggggacggcggcggcagcagcagtaactcttgctgga
ggaggaggcggcggcagtggaattggctggactaaacaggtcacttgcaggtacttcatg
catggtgtttgcaaagaaggaaacaactgccgctattcccatgaccttacaaccagcaag
ccttcactgatttgcaaatacttccagaaaggatgctgtacctatggagatcgctgccgg
tatgaccatgtgaagccgtcaaaccaaggattgtcagaggttcagagtggtcctacgcca
ttgatctcgaaggattctgccaccgcatcagcttctaaacttactccacttaccaaatta
aatggtgaaatgagcacaaaaacagtgattgaggaatccaaccctgcaacaagttcaaac
ctggaggactgggttaatgcagcagaatttatacctggacagccatactgtggacgaaca
acatcaacttaccctgaaacaagaaatgaagatctaataatagaagaaaactttgaggac
tctcaaactgaagatgtgaagaagcagatgtgtccatatgctgccttaggagaatgtcga
tatggtgttaactgtgtgtacctccatggagatgtgtgcgatatgtgtggtttacaggtt
ctccatccaattgacgcctctcagagatcagaccacataaaggcatgcattgaggctcat
gaaaaagacatggagctatcttttgctattcagcgtagtaaggatattatatgtggcatc
tgtatggaagtaatctatgaaaaaacaaatgcgagtgagcgacgttttggaatcctgtcc
aattgcagtcatacttactgcctcaattgcattcgaaagtggaggagtgccaaacagttt
gagaataagattgttaaatcctgtcctgagtgtcgaattacatcaaattttgtcattcca
agtgaatactgggtagaagacaaggaagaaaaacaaaaacttatcaagaaatacaaagag
gcaatgagcaacaaggcatgtcgatactttgatcaggggcgtggcacttgtccctttggg
agtaactgtttctacaaacatgcgtaccctgatggtcgtctggaagaaccacaaccacca
aggaaaccagttgcatcagtggggagatatcggaaccaacggaggacgcatttttggaat
ttcattgaagagagagaaaatactgattcctatgaaaatgatgaaatggtcacctttgaa
cttggcgaagtgttacttatgcttttggcagatggccacgacgatgacttttcagatact
gatgatgagtgggacttgtttcatgatgaaatggatgttgattattatgagtttgaccta
tag
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