KEGG   Hemiscyllium ocellatum (epaulette shark): 132825002
Entry
132825002         CDS       T09720                                 
Symbol
pdzrn4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
  KO
K15682  ligand of Numb protein X 3/4 [EC:2.3.2.27]
Organism
hoc  Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:hoc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hoc04121]
    132825002 (pdzrn4)
Enzymes [BR:hoc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     132825002 (pdzrn4)
Ubiquitin system [BR:hoc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Ligand of Numb proteins
    132825002 (pdzrn4)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 zf-C3HC4_2 zf-C3HC4 Sina_ZnF zf-RING_UBOX zf-RING_2 zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 TRAF3_RING zf-TRAF GRASP55_65 zf-rbx1 PDZ_Tricorn Prok-RING_4 U-box zf-RING_6
Other DBs
NCBI-GeneID: 132825002
NCBI-ProteinID: XP_060695965
LinkDB
Position
19:complement(59508798..59981268)
AA seq 1074 aa
MGFELDRFNEEVDPDLKCNLCHKVLEDPLTTPCGHVFCASCVLPWVVQKGVCPVQCRRMS
TKELNHVLALRNLISKLDIKCDYRSRGCGKVVSLQKLAEHVEMCDYSPARCRHAGCQEVL
NLKDMDHHMRESCECRPVGICEQGCGLVLLHRELSPAAAAAGLTHCCVAALRSRVGSLQR
RAAGLARELKKQAVRAGHREQALLAQVSALQSEVQLTALRYQKKFNQYMVHISSISRNIA
ACCRENGETKSLTIVLHRENDTLGFNIIGGRPNPESEEDSPSEGIYVSKVMEKGPADRAD
GLEVHDRIIEVNGKDLSKATHEEAVEAFRNAKDPIVVQVLRRAPVTKNHGSSQEVPLVDA
GTQTEITFEHIMALSKLRSSSPPVPDICPYLLSDSCHSLHPMAHDYYEASDYLPNLAHDG
DRADELEYEEVELCRISSQEKLGLTVCYRTDDDEDDSGIYVSEVDPNSIAAKDGRIREGD
RIVQINGKDVQDREEAVALLSSEESRNILLLVARPEIQLDEGWLDDDRNEFLDELHMDML
EQQHNQAMQFTATTLEQKKHEEDGGTTDTATTSSNNHEKDSGLGRTDDSVRNDESSEQEI
LGEEQNSTSLQSQGDLGYSQDTLGSSEIQCNESFISGEYNDSDFVGTQDEECERFKELLE
LKCKMSNRSQFDLYYSTSTIQCGRRQQEVVDRELEMLNEELRNIELECQNIMQAHQLQTV
REEYGDVWSIHGSGFGNYNTSIDSPRGKKLADIMEHPEKSDKDSSSAYNTAESCRSTPLT
VDRSPDGSLQRIVSITNKKNLRSSIEAVQAAAVASPSSPSPRRISAEASPTVSSSSETPE
TAVPGDDTEHVTEGSKSGEGGEHVPYLSAYHSSPYRHVNIPAHARHYQSYMQLIQQKSAV
EYANSQLSLVSMCKDAHKATADSKAEWKVKIRSDGTRYITKRPVRDRLLKERAMKIKEER
CGMTTDDDAVSEMKTGRYWSKEERKQHVVRAKEQRRRREFMMRSRLECLRENPQSGGEGK
KEVNIIELSHRKMMRKRNKKIFDNWMTIQELMTHGAKSPDGTRIYNSFLSVTTV
NT seq 3225 nt   +upstreamnt  +downstreamnt
atggggtttgagctggatcgtttcaacgaggaggttgaccccgatctaaagtgtaacttg
tgccacaaggtgttggaggaccccttgaccacaccgtgcggtcatgtcttctgcgcgagt
tgtgtgctgccctgggtggtgcagaaaggcgtgtgccctgtccagtgccggaggatgtcc
accaaggagctcaaccacgtcctggctctgcgaaacctcatctccaagctggacatcaag
tgcgactacaggtcccggggctgtgggaaggtggtgagcttgcagaagctggccgagcat
gtggagatgtgtgactacagcccggcgaggtgccggcacgcaggctgccaggaggtgctc
aacctgaaggacatggaccaccacatgcgggagagctgcgagtgccgcccggtgggcatc
tgcgagcagggctgcgggctggtgctgctgcaccgggaactgagtccagccgccgccgcc
gccggcctcactcactgctgcgtggcggctctccgctcccgggtgggctcactgcagcgg
agggcggccggcctggcccgggagctcaagaagcaggcggtccgcgccggccaccgggag
caggcgctgctcgcccaggtctcggcgctgcagagcgaggtgcagctcacggccctccgc
taccagaagaagttcaaccagtacatggtgcacatcagcagcatcagcaggaacatcgcc
gcctgctgcagggaaaatggcgaaacaaaatcgttaactatagttttacatcgagaaaat
gacacacttggatttaacattattggcggaagacccaatccggaaagtgaggaagattct
ccaagtgaaggaatttatgtttccaaagttatggagaaagggcctgctgacagagcagat
ggactggaagttcatgacaggatcattgaggtcaatgggaaggatctctcaaaagccaca
cacgaggaggctgtggaagctttccgaaatgccaaggacccaattgtcgtacaggttctg
cgtcgggcccccgtcacaaagaatcatggcagttcccaggaagttccacttgtggatgct
ggcacacagacagaaattacttttgagcacatcatggctctctccaagttgaggtcgtct
tcgcctccagtacctgacatctgcccgtatctattatcagacagctgtcactctctccat
cccatggcccatgattactatgaagccagcgattaccttcccaacttggcacatgatggg
gatcgagccgacgagctggagtatgaggaggttgagctgtgccgcataagcagccaggag
aagctaggccttactgtctgctaccgaactgatgacgatgaagacgacagtgggatctac
gtgagcgaggtcgacccaaacagcatcgcggcgaaagatgggcgtataagagagggcgat
cggatcgttcaaataaatgggaaggatgttcaagatcgggaggaggccgtggccttactg
tccagcgaggaaagcaggaacattctgttgctggttgccagaccagagattcagttggat
gaaggatggcttgatgatgaccggaatgaatttcttgacgagcttcatatggatatgttg
gaacagcaacacaatcaggcaatgcagttcacagctaccacacttgagcagaaaaaacat
gaagaagatggtgggacgacagatactgcaactacctcttcgaataaccacgagaaggac
agcgggctcggccgcacagacgacagtgtgaggaatgatgagagttcggaacaggagatc
cttggagaggagcagaacagcacctcgctgcaaagtcagggggacctgggctacagccag
gataccctgggcagcagtgagatccagtgcaacgagagcttcatctcgggggaatataat
gactctgactttgtgggcacccaggatgaagaatgcgagcggttcaaggagctcctggag
ctcaagtgcaagatgagcaatcgaagccagtttgatctctactactccaccagcacaatc
cagtgtggcaggaggcagcaagaggtggtggaccgggagctggagatgctcaacgaggag
ctaaggaacatcgagttggagtgccagaacatcatgcaggcccaccagctgcagacggtg
agggaggaatacggcgacgtgtggtcgatccacggcagtggattcgggaactacaacacc
agcatcgactcgcccagggggaagaaactggccgacatcatggagcacccagagaagtca
gacaaggacagctccagtgcctacaacacagctgagagctgccgcagcacccccctgact
gtggaccgctcgcctgacggctcactgcagcgaattgtcagcatcaccaacaaaaagaac
ctgaggagctccatcgaagctgtccaggctgctgctgtggcctcaccgtcatcgccgtca
cccaggcgcatcagtgcggaggccagccccaccgtcagcagctcctcagagacaccggaa
acagccgtgcctggtgacgacacggaacatgtgacagaggggagcaaatctggcgagggt
ggtgagcacgtgccctacctgtcagcctatcatagctcgccctaccgacatgtcaacatc
cctgcgcatgcgcggcactaccaaagctacatgcagctcatccagcaaaagtcagcggtc
gagtatgccaacagccagctgagtctggtgagcatgtgcaaggatgcccataaggccaca
gcggactccaaggccgagtggaaggtcaagatccgcagtgatggtactcgctacatcacc
aagcgcccagtgcgtgaccgcctgctcaaggagcgtgccatgaagatcaaggaggagcgc
tgtggcatgaccacagatgacgacgccgtgagtgagatgaagacaggccgctactggagc
aaggaggagcgcaagcaacatgtcgtgcgggccaaggaacaacggcggcgcagagagttc
atgatgcgcagccgtctggagtgcctcagggaaaacccccagagcggcggtgagggcaaa
aaggaggtcaacattatcgaactgagccacagaaaaatgatgaggaagcgcaacaagaaa
atctttgacaactggatgacaatccaagaactcatgacacatggtgccaagtccccagat
ggcacaagaatctacaattccttcctgtcagttactactgtgtga

DBGET integrated database retrieval system