Entry |
|
Symbol |
pdzrn4
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Name |
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
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KO |
|
Organism |
hoc Hemiscyllium ocellatum (epaulette shark)
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Brite |
KEGG Orthology (KO) [BR:hoc00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:hoc04121]
132825002 (pdzrn4)
Enzymes [BR:hoc01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132825002 (pdzrn4)
Ubiquitin system [BR:hoc04121]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
132825002 (pdzrn4)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
19:complement(59508798..59981268)
|
AA seq |
1074 aa
MGFELDRFNEEVDPDLKCNLCHKVLEDPLTTPCGHVFCASCVLPWVVQKGVCPVQCRRMS
TKELNHVLALRNLISKLDIKCDYRSRGCGKVVSLQKLAEHVEMCDYSPARCRHAGCQEVL
NLKDMDHHMRESCECRPVGICEQGCGLVLLHRELSPAAAAAGLTHCCVAALRSRVGSLQR
RAAGLARELKKQAVRAGHREQALLAQVSALQSEVQLTALRYQKKFNQYMVHISSISRNIA
ACCRENGETKSLTIVLHRENDTLGFNIIGGRPNPESEEDSPSEGIYVSKVMEKGPADRAD
GLEVHDRIIEVNGKDLSKATHEEAVEAFRNAKDPIVVQVLRRAPVTKNHGSSQEVPLVDA
GTQTEITFEHIMALSKLRSSSPPVPDICPYLLSDSCHSLHPMAHDYYEASDYLPNLAHDG
DRADELEYEEVELCRISSQEKLGLTVCYRTDDDEDDSGIYVSEVDPNSIAAKDGRIREGD
RIVQINGKDVQDREEAVALLSSEESRNILLLVARPEIQLDEGWLDDDRNEFLDELHMDML
EQQHNQAMQFTATTLEQKKHEEDGGTTDTATTSSNNHEKDSGLGRTDDSVRNDESSEQEI
LGEEQNSTSLQSQGDLGYSQDTLGSSEIQCNESFISGEYNDSDFVGTQDEECERFKELLE
LKCKMSNRSQFDLYYSTSTIQCGRRQQEVVDRELEMLNEELRNIELECQNIMQAHQLQTV
REEYGDVWSIHGSGFGNYNTSIDSPRGKKLADIMEHPEKSDKDSSSAYNTAESCRSTPLT
VDRSPDGSLQRIVSITNKKNLRSSIEAVQAAAVASPSSPSPRRISAEASPTVSSSSETPE
TAVPGDDTEHVTEGSKSGEGGEHVPYLSAYHSSPYRHVNIPAHARHYQSYMQLIQQKSAV
EYANSQLSLVSMCKDAHKATADSKAEWKVKIRSDGTRYITKRPVRDRLLKERAMKIKEER
CGMTTDDDAVSEMKTGRYWSKEERKQHVVRAKEQRRRREFMMRSRLECLRENPQSGGEGK
KEVNIIELSHRKMMRKRNKKIFDNWMTIQELMTHGAKSPDGTRIYNSFLSVTTV |
NT seq |
3225 nt +upstreamnt +downstreamnt
atggggtttgagctggatcgtttcaacgaggaggttgaccccgatctaaagtgtaacttg
tgccacaaggtgttggaggaccccttgaccacaccgtgcggtcatgtcttctgcgcgagt
tgtgtgctgccctgggtggtgcagaaaggcgtgtgccctgtccagtgccggaggatgtcc
accaaggagctcaaccacgtcctggctctgcgaaacctcatctccaagctggacatcaag
tgcgactacaggtcccggggctgtgggaaggtggtgagcttgcagaagctggccgagcat
gtggagatgtgtgactacagcccggcgaggtgccggcacgcaggctgccaggaggtgctc
aacctgaaggacatggaccaccacatgcgggagagctgcgagtgccgcccggtgggcatc
tgcgagcagggctgcgggctggtgctgctgcaccgggaactgagtccagccgccgccgcc
gccggcctcactcactgctgcgtggcggctctccgctcccgggtgggctcactgcagcgg
agggcggccggcctggcccgggagctcaagaagcaggcggtccgcgccggccaccgggag
caggcgctgctcgcccaggtctcggcgctgcagagcgaggtgcagctcacggccctccgc
taccagaagaagttcaaccagtacatggtgcacatcagcagcatcagcaggaacatcgcc
gcctgctgcagggaaaatggcgaaacaaaatcgttaactatagttttacatcgagaaaat
gacacacttggatttaacattattggcggaagacccaatccggaaagtgaggaagattct
ccaagtgaaggaatttatgtttccaaagttatggagaaagggcctgctgacagagcagat
ggactggaagttcatgacaggatcattgaggtcaatgggaaggatctctcaaaagccaca
cacgaggaggctgtggaagctttccgaaatgccaaggacccaattgtcgtacaggttctg
cgtcgggcccccgtcacaaagaatcatggcagttcccaggaagttccacttgtggatgct
ggcacacagacagaaattacttttgagcacatcatggctctctccaagttgaggtcgtct
tcgcctccagtacctgacatctgcccgtatctattatcagacagctgtcactctctccat
cccatggcccatgattactatgaagccagcgattaccttcccaacttggcacatgatggg
gatcgagccgacgagctggagtatgaggaggttgagctgtgccgcataagcagccaggag
aagctaggccttactgtctgctaccgaactgatgacgatgaagacgacagtgggatctac
gtgagcgaggtcgacccaaacagcatcgcggcgaaagatgggcgtataagagagggcgat
cggatcgttcaaataaatgggaaggatgttcaagatcgggaggaggccgtggccttactg
tccagcgaggaaagcaggaacattctgttgctggttgccagaccagagattcagttggat
gaaggatggcttgatgatgaccggaatgaatttcttgacgagcttcatatggatatgttg
gaacagcaacacaatcaggcaatgcagttcacagctaccacacttgagcagaaaaaacat
gaagaagatggtgggacgacagatactgcaactacctcttcgaataaccacgagaaggac
agcgggctcggccgcacagacgacagtgtgaggaatgatgagagttcggaacaggagatc
cttggagaggagcagaacagcacctcgctgcaaagtcagggggacctgggctacagccag
gataccctgggcagcagtgagatccagtgcaacgagagcttcatctcgggggaatataat
gactctgactttgtgggcacccaggatgaagaatgcgagcggttcaaggagctcctggag
ctcaagtgcaagatgagcaatcgaagccagtttgatctctactactccaccagcacaatc
cagtgtggcaggaggcagcaagaggtggtggaccgggagctggagatgctcaacgaggag
ctaaggaacatcgagttggagtgccagaacatcatgcaggcccaccagctgcagacggtg
agggaggaatacggcgacgtgtggtcgatccacggcagtggattcgggaactacaacacc
agcatcgactcgcccagggggaagaaactggccgacatcatggagcacccagagaagtca
gacaaggacagctccagtgcctacaacacagctgagagctgccgcagcacccccctgact
gtggaccgctcgcctgacggctcactgcagcgaattgtcagcatcaccaacaaaaagaac
ctgaggagctccatcgaagctgtccaggctgctgctgtggcctcaccgtcatcgccgtca
cccaggcgcatcagtgcggaggccagccccaccgtcagcagctcctcagagacaccggaa
acagccgtgcctggtgacgacacggaacatgtgacagaggggagcaaatctggcgagggt
ggtgagcacgtgccctacctgtcagcctatcatagctcgccctaccgacatgtcaacatc
cctgcgcatgcgcggcactaccaaagctacatgcagctcatccagcaaaagtcagcggtc
gagtatgccaacagccagctgagtctggtgagcatgtgcaaggatgcccataaggccaca
gcggactccaaggccgagtggaaggtcaagatccgcagtgatggtactcgctacatcacc
aagcgcccagtgcgtgaccgcctgctcaaggagcgtgccatgaagatcaaggaggagcgc
tgtggcatgaccacagatgacgacgccgtgagtgagatgaagacaggccgctactggagc
aaggaggagcgcaagcaacatgtcgtgcgggccaaggaacaacggcggcgcagagagttc
atgatgcgcagccgtctggagtgcctcagggaaaacccccagagcggcggtgagggcaaa
aaggaggtcaacattatcgaactgagccacagaaaaatgatgaggaagcgcaacaagaaa
atctttgacaactggatgacaatccaagaactcatgacacatggtgccaagtccccagat
ggcacaagaatctacaattccttcctgtcagttactactgtgtga |