Hemiscyllium ocellatum (epaulette shark): 132825148
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Entry
132825148 CDS
T09720
Name
(RefSeq) RNA exonuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132825148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hoc03009
]
132825148
Ribosome biogenesis [BR:
hoc03009
]
Eukaryotic type
Pre-60S particles
RNases
132825148
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNase_T
DNA_pol_A_exo1
RRM_occluded
DEDDh_C
Motif
Other DBs
NCBI-GeneID:
132825148
NCBI-ProteinID:
XP_060696147
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Position
20:15693229..15747021
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AA seq
811 aa
AA seq
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MADNAKRLCKRKRAGENGTEEIKKKAAKIQNRTTVESDIGQSSQIHPKRVPVFTINPESN
PCAITYEQLCALINYAVLGKVRSSLPSWCQVHNQKELKGVAVIILHGVSQMHFYRYYLQF
KHLKKRFRFRFSLPPPPDDFLLRIFGTEKILPQDKSPVVNGSSAVNGHCLMTENNNCKSS
DVDNHPIIIKYGRNKQGLTSFLLTKDELMKNDYPVAGTPHSEGFIQSGCTAKVTDNSPLL
GLDCEMCLTTKGNELTRVSVVNADGCCVMDQLVKPDNPILNYLTRFSGITKEMLMPVETK
LRDVQAKLKKLLPNDAVLVGHSLNNDLKALKMIHSNIIDTSLLYARDFGRRFKLKVLARS
VLGKEIQSEGVIGHDASEDARAALELAQYFIKQGPMKVAKLNLENFQTKQPTGDHFTTRP
EGRSLTNRLSDSLKANCSKVDRLIGRPPLHCGSLVNTLHAHGQKAVLLGTNKAMKELIHQ
EAWHKFECKTDKEVVQQAQNEIPFASLSLSHFTSYSEYSEYNLQMKIHEELLHEKMRRKL
SEMCTVYAGPFCKDFCLTSVERTFQSCGSISSISIITETHKPYVRIEYALPESALIAVLT
LNGSVVGQFPITVQRPTKESTLDCDHVLKKLENDITNRAVIYVSGIPQTLTKNRLNVKFS
KFGHIEAIIYPGDDIGAKPQDCFIKYGSLESALKAQAAMNGQEVRNQKLNVVRALTPYHL
QSWAAQKSYTTLNPRTSDPLPFDGHSFEKRKNKLSQCEQELKSMMSTIDQRTGRLFRALP
NNTLCMVLLPGTNSAQCSAPGLCLLEIKQDP
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggctgataatgccaaaagactgtgtaaacgaaagagagcgggagagaatggtacagag
gaaataaagaagaaggcagccaaaatccaaaataggaccactgtggaaagtgacattgga
caaagcagccaaattcacccaaagcgtgttcctgttttcaccatcaatccagaaagcaac
ccctgtgccattacttatgagcaactctgtgcgctaataaactatgctgtattgggaaaa
gtgagaagttctcttcccagctggtgccaagttcacaaccagaaagaacttaaaggtgta
gcagtgattattctacatggagtgagtcagatgcacttctacagatactacctccaattt
aagcatctgaagaaaaggtttagatttagatttagcctgccccctcctcctgatgatttt
ctgcttcgtatttttggaactgagaaaatactcccacaagataaaagtcctgtggtgaat
ggcagctctgcagtaaatggtcattgtcttatgacagagaataataactgcaaatcatca
gatgttgacaatcatcccatcattattaaatatggcagaaacaaacaaggcttgaccagt
tttttgttgactaaagacgagttgatgaagaatgattatcctgttgcaggcactcctcat
tcagaaggatttatccaaagtgggtgcacagctaaagtaactgacaatagtccattgttg
ggcctagactgtgaaatgtgcctgaccacaaaagggaatgagctgactcgtgtctctgtt
gtcaatgcagatggatgttgtgttatggatcagctggtgaagccagacaacccgatcctc
aactatctcaccaggttctctggaatcacgaaggaaatgctgatgccagtggaaacaaag
ctgagggatgttcaagctaagttaaagaagctcttacccaatgatgctgtacttgtgggc
cattctttaaacaatgacttgaaggctttaaaaatgattcattcaaatataattgataca
tcactgctttatgccagagacttcggtcggagatttaagttgaaagttttggcaagaagt
gttctgggaaaggaaattcaatcagaaggagtgattggtcatgatgcatctgaagatgca
agagcagctctggagttggcacaatatttcatcaagcaggggcccatgaaggtagcaaag
ttgaacctggagaatttccaaactaaacagccaacaggagatcatttcacaacacgacct
gaaggcagaagtctgacaaacaggctgtcagattccctgaaagcaaactgcagcaaggta
gacagattaataggcagaccacccctccattgtggcagtttggttaacactttgcatgcg
catggtcagaaagcagttctattaggcacaaataaagcaatgaaggagctgatacatcaa
gaagcttggcacaaatttgaatgtaaaacagacaaagaagttgttcagcaagctcagaat
gagatcccatttgcctcgctaagtttaagtcactttacatcttattccgaatatagtgag
tataatctacagatgaagattcacgaggaactactgcatgaaaagatgagacggaagttg
tcagaaatgtgtactgtctacgctggtccattctgcaaggatttctgtttaacatctgtc
gaaagaacattccaaagttgtggttccatcagttctatcagtattatcacagaaacacac
aagccttatgtgcgtattgagtatgcacttcctgaaagtgcactcattgctgtgcttact
ttgaatggaagcgttgtggggcaatttcccattacggttcaaagacctactaaagaaagc
acactggattgtgatcatgtcctaaagaagctggaaaatgatatcacaaacagagcggtt
atttatgtatcaggaattccacagaccctgacaaagaatcgcctcaatgtgaagttcagc
aaatttggacatattgaggctattatttaccctggtgatgatattggtgcaaagcctcag
gattgctttataaaatatggaagcttggagagtgctctaaaggcccaggcagcaatgaat
ggacaagaagtgagaaaccaaaaactgaatgtagtaagagctctcactccctaccacctc
caatcctgggctgctcaaaagtcttacaccacactgaacccgaggacatctgaccctctg
ccattcgacgggcattcttttgagaagagaaaaaacaaactttctcagtgtgagcaagaa
ttgaaaagcatgatgagtacaatagatcaacgtacagggagactcttcagggcattaccc
aacaacacactctgcatggtcctgctgccagggacaaacagtgctcaatgctcagcgcct
ggcctctgtctccttgaaataaagcaggatccttaa
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