Hemiscyllium ocellatum (epaulette shark): 132825323
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Entry
132825323 CDS
T09720
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03420
Nucleotide excision repair
hoc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
132825323 (ercc4)
03460 Fanconi anemia pathway
132825323 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hoc03032
]
132825323 (ercc4)
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132825323 (ercc4)
DNA replication proteins [BR:
hoc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
132825323 (ercc4)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
132825323 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
132825323
NCBI-ProteinID:
XP_060696428
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All DBs
Position
20:6619477..6651898
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AA seq
901 aa
AA seq
DB search
MTPLLEHESQIFLDLFHEDGLVITARGLGVDRILFNFLKLYSDPGNLVLVINTAGAEEQY
FIEQLRSEGVTHLPRIITNEVLSSDRYTVYTEGGVLFVTSRILVVDLLTDRIPANLITGI
LVYKAHRIVDSCQEAFILRLYRQKNKKGFIKAFTDNAVAFSLGFCRVERVMRNLFVRKLY
LWPRFHIAVGSCLDRHKPEVIELHVSLTPSMLAIQTAIMDVMNACLKELKRYNPSLDVEE
LSLENAIGKSFDKALCYYLDPVWHQLGAKTKSLVQDLKVLRTLLEYLTQYDCVTFLNLLE
SLRATERAFGQNSGWLFLDASNTMFVNARARVYKRPDTKLKASANMRNTESKDTDKAEKD
LVLEPNPKWEALSEVLTEIKRENESSEASGHVLICASDDRTCAQLKEYITVGAEDLLMRL
YNKTFGKGEKAEDAGETCIKDRKPGKTKARSKPSNGPKLKKAKTETAKNRRKPELTLTQM
VGRENDEGSEKAKEGEGEGENEESVSPETGNEEAQSKGVIAKLPTDACYGILKEPLIVIH
PLKGCSDPYSLSRVLHEIEPRYVVLYDAELSFVRQLEIYRVSKPGKSLRVYFLIYGGSTE
EQRYLTKLRKEKTAFELLIREKAMMVIPEEREGRDDLNSDLVRSVAPATAIADTRKAGGQ
TQKHEQQRIIVDVREFCSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERKSVSDLIGS
LNKGRLYTQCVTMSRYYKRPVLLIEFDPNKPFSLNFRGFAHQDFSVNDLTSKLTLLTLHF
PRLRLLWCASPHVAAELFEELKQNRPEPDAAVAVAVSGDSETVSESGRYNPGPQDFLLKM
PGINTKNSRALMNQVKNIAELVTLSQERLAEILGNTNNAKQLWEFIHSSYLDFTVQGKNR
K
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgactcctctcctggagcacgagagtcagatcttcctggatttattccatgaggacggg
ctggtgatcacggccaggggcctgggggtggacaggattctcttcaacttcctcaagtta
tacagtgacccgggcaacctggtgctggtgatcaacaccgccggagctgaggagcaatac
tttattgaacagctacgttccgaaggagtaacccatcttcctcgcatcattaccaatgaa
gttttgagcagtgatcgttacacagtgtacactgaaggtggagtcttgtttgtgaccagc
cgtattcttgttgttgacctcttaacagatcgcattcctgcaaatcttattacaggtatt
ttggtatacaaagcccaccgaattgttgattcatgtcaggaagcatttatccttcggctt
tatcgacagaagaacaaaaagggttttatcaaggctttcacggacaacgcagtggccttt
agtctcggtttctgtcgcgtggagcgagtgatgcgaaacctgtttgttcgaaagctgtac
ctctggcccagattccatatcgcggtcggctcctgcctggacaggcacaaacctgaagta
atagagttgcacgtatctctgacgccctccatgctggctatccagactgctataatggac
gtgatgaatgcgtgcttgaaggaactcaaacgctacaatccatctttggatgttgaggaa
ctgtcccttgagaacgctattggaaagtcatttgacaaggcactctgttattatttggac
ccagtctggcaccagcttggagcaaaaaccaagtccctggtgcaagatttgaaggttctc
cgcactctgttagagtatctaacccagtatgactgcgttaccttcctcaatctgctcgag
tcgcttcgggctactgagagagcttttgggcagaattcagggtggttatttctggatgcc
agtaacacaatgtttgtgaatgcacgagccagggtgtacaaacgtccagacacaaagctt
aaagcctcagcaaatatgagaaacactgaatcaaaagacacggacaaggcagaaaaggat
ctcgtcctggagccaaatccaaagtgggaagcgttgagtgaagtcctaacagagataaaa
agagaaaatgagtccagcgaagcctcaggtcatgtgctgatctgtgccagtgatgataga
acctgtgcccagctgaaggaatacattactgttggagcagaagacttgttaatgagactc
tataacaaaaccttcgggaagggcgaaaaggcagaggatgctggggaaacctgcataaag
gataggaagcctggcaaaaccaaggcgagatcaaaacctagcaatgggccaaagctgaag
aaagcaaaaacagagacagctaaaaacaggaggaagccagagttgactttgactcaaatg
gtaggaagagaaaatgatgaaggttctgagaaagcaaaggaaggagagggggaaggggag
aatgaagaaagtgttagcccagaaactggcaacgaggaagctcaatcaaagggtgtgatt
gcaaaacttccaacagatgcctgctatggaatcctgaaggagcccctcattgttatccac
cccttaaagggctgcagcgatccgtacagcctttcccgcgtactgcacgaaatcgagccc
cgctacgtcgtactgtatgatgcagaactgtcgtttgttcgtcagctggagatttacaga
gtgagcaagcctggcaagtctctccgagtttattttctaatatacggaggctcgacagag
gagcaacgttatctgaccaagctgaggaaagagaaaacagcttttgagcttttgataagg
gagaaggcaatgatggtgatccctgaggagagagagggaagagatgatttaaactcagac
ctcgtacgaagtgttgccccagcaactgctattgcagacacgaggaaagcaggtggtcag
actcagaaacacgagcagcagcgaattatagtggacgtacgggagttctgcagtgagctg
ccttccctgatacatcgacgtggcattgacatcgagccagtcaccctggaggtcggtgac
tatattctgacgcccgatatctgtgtggaacgtaagagtgtgagcgacctgatcggctct
ttgaacaaaggccggctgtacacccagtgtgtcaccatgtcccggtactacaaaaggccc
gtgcttttaatcgagtttgaccccaacaagcctttctcgctgaatttcagaggcttcgca
caccaggacttttccgtcaatgaccttacatccaaactcaccttgctaacccttcacttc
ccccggctgcggcttttatggtgtgcctccccccacgtcgccgctgaattgttcgaggag
ctgaagcagaaccggccggagccggatgcagccgttgccgtagcggtgagcggtgattcc
gaaacagtctccgagtcgggtaggtacaaccccggcccacaggacttcctgctgaaaatg
cctggcatcaataccaaaaacagccgggccctgatgaaccaggtgaaaaacattgccgaa
ctggtgacactctctcaggagcgactagcagagatcctggggaacaccaacaatgccaag
cagctctgggagttcattcactcctcctatttagattttaccgtacagggaaagaatcga
aagtga
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