Hemiscyllium ocellatum (epaulette shark): 132825382
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Entry
132825382 CDS
T09720
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hoc01002
]
132825382 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hoc04121
]
132825382 (usp42)
Enzymes [BR:
hoc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132825382 (usp42)
Peptidases and inhibitors [BR:
hoc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132825382 (usp42)
Ubiquitin system [BR:
hoc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132825382 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
132825382
NCBI-ProteinID:
XP_060696562
LinkDB
All DBs
Position
20:23051563..23163430
Genome browser
AA seq
1427 aa
AA seq
DB search
MTIVDKVTEASNTAACKNQTCSSVAPFSEIVKKKNMESGATSWGATSPITEVPKSKLIGP
MPGAALFTNALQEKSKQLQKDQSVLGSGDGIAPPQKILFPAEKISLKWQQLHKIGAGLQN
LGNTCFLNSALQCLTYTPPLANYMLSREHSRTCNEQGFCMMCMMQNHITQVFSSSGNVIK
PMSVINDLRRIAKHFRFGNQEDAHEFLRYTVDALQKACLNGSNKLDRQTQATTMIYQIFG
GYLRSRVKCLNCKGVSDTYDPYLDIALEIKAAPNITKALEQFVKPEQLDGENAYKCTKCK
KMVPASKRFTIHRASNVLTLSLKRFANFTGGKITKEVRYSEYLDVRPYMSQSNGEPVIYV
LYAVLVHSGFSCHAGHYYCYIKASNGQWYQMNDSVVSSSDIRSVLNQQAYVLFYIRSHDT
KNSSEHSNHPGQSSPRPPVNQRLATNQTVSGFIGPQLPPHRTKNSNHLANGNCSQKEVPG
SAVPSTSGIRTISTSPGPSQNRSLPRPSVIPESSKRQKLSFSIQPSKQGTRQAPTQTNLH
SSPLENLYKTPSSVSHANVSPSTSGTSATGSPPSAPTALAIVAAQPVASNTASSHLMVNG
QSKGSSSSLVPYNEESSEDSDEEPKSLIKENGYVKAINGTLNGTRHCTHLKVNSSSIATS
DSCHSENLSERVISKTDVHREVGDRDKNHQICESTVSQLQSLTCSANGLSTAKESSADKI
STVPLIPNTEKITQISTSSIKQEKASEEVRANQNKLLMSSKASSAINHSGGGGDADTVHT
YMADKQANPLVPPLKEATDGPSTSSTVNPIKSNSELQKNIAECCHVNSSYHDQSPVHKVQ
AIPEITETQEKLRPNQVKEEMQTGDHKTNVHGFENKQSSQDLGNKMPELENHSNNPQSNN
NQGSILENESQSCKEHSYRGRTNQDDFTGGDHCIKKPQSDRGTNNEVKNWVIEESRQPVN
KNQYHENKPSQDIQQKPEQHPTNFVESAIGEHLNENKNSISEQDNTYKDNCLMSPRKNIA
GPEEKRVQMKENSTFVDVKSQCRERTGAEKNRTLQKDSYKGESNYRHRSREHKDRRMHQN
AREFEKSASCNYRNCSHKQDYYQDGRNDKYRRNNECPADRQNYSNSKTSSLLAYYPYQDR
FYREKYNFGSNGRTWSSHIEYNGLEHKYEHKRKRSNSVNDEGDPERKCKKLHRSSEERRM
KKHKKSKKKKTSKDKHRSRDHRQQPFGASEASCDIDERKHRKKKKKKKKKRHHSDKDSHY
QKEHHHSRKYHSVKSPHASNKWERFCESTRGTYSEDKMMHRNKQTGDDQIPQKEKLAHLD
TKLNGSHVHSKEELLNEHNGSLNRHLLDYVGSGSLSDWSKRRLENGSDSHKPYSKFDKEH
LHEKHYSHGYKEFGSADNRNNLTSVGSFRETTRWKTDEKRSEDQKAH
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagtgacagaggcctcgaacactgcagcttgcaagaaccaaacc
tgcagctctgtggcacctttctctgaaattgttaaaaagaagaacatggagtcaggggca
acaagttggggtgctacatcccctattacagaggtaccaaaaagcaaactcataggacct
atgcccggagctgctttgttcactaatgcactgcaagagaagtcaaagcaactacaaaaa
gatcaaagtgtacttggcagtggtgatggaatagcgcctccacagaaaatactgttccct
gcagaaaaaatctccctgaaatggcagcagctgcacaaaataggagctggcctccaaaat
ctgggcaacacctgcttcttaaactctgcactgcagtgtttgacttatacgccacctctt
gcaaactacatgctttcccgggaacattctagaacatgtaatgaacaaggattttgtatg
atgtgtatgatgcagaatcatattacccaggtcttttccagttctggaaatgtcatcaag
cctatgtctgtcattaatgacctccgacgaatcgcaaaacattttcgatttggaaatcag
gaagatgcacatgaattcttgcgttacactgttgatgctctccagaaagcatgcctaaac
ggaagtaacaaattggatagacaaactcaggccaccacaatgatatatcaaatttttgga
ggttacttgagatcaagagtaaaatgcttaaactgcaaaggtgtttctgacacatatgac
ccttacttggatattgctctggaaataaaggctgcaccaaacatcacaaaagctctagaa
caatttgtaaagccagaacaactggatggtgaaaacgcctacaaatgcacgaagtgtaag
aaaatggtgccagcctcgaaaagattcacaatccatcgagcttcgaatgtgctgacactt
tctctgaagcgctttgcaaactttacaggtggaaagatcacaaaggaagtgaggtactct
gaatatttggatgttcgaccctatatgtcgcagtctaatggagagccagttatctatgtg
ttatatgcagtattggtacattcaggattcagctgccatgctggacattactactgttat
atcaaggctagcaatggacagtggtaccagatgaatgattctgtcgtatcttcaagtgac
atcagatcagtgctaaaccaacaagcctatgtgctcttttacatcagatctcatgataca
aaaaatagctcagaacattctaatcacccaggccagtcatctccaaggccacctgtaaac
cagcgattggctaccaatcagactgtatctggttttattggaccacagctccctccacac
aggaccaagaactcaaaccacttagcaaatggaaactgttctcaaaaggaagttcctggc
agtgcagtacccagcacaagtggaatcaggaccatttctacttcccctggaccctctcag
aatcgttcattgcccagaccaagtgtgatacctgaatcttccaaaaggcaaaaactttcc
ttcagtatacagccctccaagcaaggaacaagacaagctccgactcagaccaacctgcat
tctagtccattggagaacttatacaaaactccttccagtgtttcccatgctaatgtgtct
ccatctacctcaggaacttcagccacaggatctccgccctctgctccaactgctttagcc
attgtagctgctcagccagttgcatccaacactgcctcttctcacttaatggtcaatggt
cagtccaaaggatcttccagttctttggtcccttataatgaggaatcttcagaggactct
gatgaggaacctaagagcttgataaaagaaaatggttatgtgaaagctataaatggtaca
cttaatggaactagacactgtacacatctcaaggtaaactcttcatctatagccactagt
gacagttgccattctgagaatctgtctgagagagttataagtaaaactgatgtgcacagg
gaagtgggcgatcgtgacaagaatcatcagatctgcgaatccactgtttctcagctgcag
tccctgacttgttctgcaaatggattatctactgcaaaggaatcatctgcagataaaatt
agcactgttcctctaattccaaacacggaaaagataacacagatctctacaagcagtata
aagcaggagaaagcttcagaagaagtcagggcaaatcaaaacaaattgctaatgtcttct
aaagccagttctgcaataaatcatagtgggggtggtggtgatgcagacacagtacataca
tacatggctgacaagcaagcaaatccactggtccctccactaaaagaagccactgatggg
ccatccacatcatccacagtcaatcctattaaaagcaacagtgaacttcagaaaaatatc
gctgaatgttgtcatgttaacagtagttaccatgaccaaagtcctgtccacaaagtacaa
gcaattccagaaattactgaaacccaagaaaaattaagacctaatcaggtcaaagaggag
atgcagactggtgaccataagaccaatgttcatggttttgaaaataagcaatcaagtcaa
gatctaggcaataagatgccagaattggaaaatcacagtaataaccctcaatctaataac
aaccagggaagtattttggaaaatgaaagtcaatcttgtaaggaacactcctataggggg
aggactaatcaggatgattttacaggaggagatcattgcatcaaaaaacctcagtctgat
aggggaacaaataacgaagtcaagaactgggtaattgaggaaagtcgtcaacctgtcaac
aaaaatcagtatcacgaaaacaaaccaagtcaagacatacagcagaaaccagagcagcac
ccaactaattttgtggaatctgccattggggaacatttgaatgaaaataagaatagcatt
tcagaacaggataatacttacaaagacaactgtcttatgtcaccaaggaaaaatatagct
ggtccagaggaaaagcgggttcagatgaaagaaaactcaactttcgtcgatgtaaaatct
caatgtagggaaaggactggtgcagaaaagaatagaactttacaaaaggatagttataag
ggtgagtctaattatagacacagatctagggaacacaaagatagaagaatgcaccaaaat
gcaagggagtttgaaaaatcagcaagttgtaattacaggaattgttcccacaagcaagat
tattatcaagacggtcgcaatgataaatatagaagaaataatgagtgtccagctgatagg
caaaactacagtaattcaaagacaagctcattactagcttattatccttatcaagatagg
ttttacagagagaaatataattttggctcaaatggaaggacttggagcagtcacattgaa
tataatggactggaacacaaatatgagcataaaaggaaacgtagtaacagtgtgaatgat
gaaggtgatcctgaaaggaaatgtaaaaaactgcatcgatcatctgaggaaaggagaatg
aaaaagcataaaaaatcaaagaaaaaaaagacatcaaaagacaaacacagaagtagagac
cacaggcaacaaccttttggtgcatctgaggcaagctgtgacattgatgaaagaaagcac
aggaaaaagaagaagaagaaaaaaaagaaacggcatcacagtgacaaagacagccattat
cagaaagagcatcatcattccaggaaatatcatagcgtgaaatcacctcatgccagtaac
aaatgggaaaggttctgcgagtcaactcgaggtacctattctgaagataagatgatgcat
agaaataaacaaacaggtgatgatcaaattccacagaaagaaaaattggcacatttggac
actaagctaaatggctcacatgtccacagcaaagaggaattgttgaatgagcataatgga
agcttaaatagacatcttttggactatgttggatcaggatctctttctgactggtccaag
cggaggttggaaaatggaagtgattcacataaaccctattcaaaattcgataaagaacac
ttacacgaaaagcactattcacatggctacaaagaatttggttcagcggacaataggaac
aatctgactagtgttggttcctttagggagactacacgatggaagactgatgaaaagaga
tctgaagaccagaaagcccactaa
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integrated database retrieval system
