Hemiscyllium ocellatum (epaulette shark): 132825429
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Entry
132825429 CDS
T09720
Symbol
abca3b
Name
(RefSeq) phospholipid-transporting ATPase ABCA3 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132825429 (abca3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hoc02000
]
132825429 (abca3b)
Transporters [BR:
hoc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
132825429 (abca3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_23
AAA_22
AAA_29
SRP54
Cas6_I-A
AAA_27
AnmK
Motif
Other DBs
NCBI-GeneID:
132825429
NCBI-ProteinID:
XP_060696671
LinkDB
All DBs
Position
20:complement(27014930..27132087)
Genome browser
AA seq
1705 aa
AA seq
DB search
MTRLRQFGLLLWKNYVLQKRQVVVTIVEISLPLLFAIILIILRQRVNSVQYPNATIYPPF
YIYDIPYFPQYPTTKWSLAYIPSNVTAVETIAKLVKDSLRRIVKIVGFQTEAQFNDFIRS
ENKSTKKILVALVFDHDFKHQDERLPLQVNYHLRFKYGPLNAPLGELSSFNPNQDKDWHT
RFLFPLFQVPGPREQYFKDGGSPGYYREGFLATQLATDKAIIKYHASKEAAKLLSIFQVE
MLRFPFPPYTDDIFILAIQTQLSLLVMLSFTYTALNVTKAIVLEKETKLKEYMKMMGLNS
WLHWLAWFFKFLLFLITSIFLMTVLFCAKMSKQGAVLTNSDPTLVFAFLLLFSISTISFS
FMISVFFSKANVAAAVSGFLYFLSYIPYFFIAPRYQRMTHSQKVASCLISNVGMALGCQL
IGMFEGKGVGVQWSNIFLPVNVDDNLTLAQSMAMLVFDSVIYILVTWYVEAVFPGEYGIP
QVWYFFILPSYWLGKPRTEYIKINKEDEEAEKPLNTEYMEDDPLDIEAGIKIKDLTKVFK
VGNEMKEVVSHLTFNLHKGQISVLLGHNGAGKTTTLAMLTGLFPPTSGTATINGYDICQD
MPLVRQSLGLCPQHDVLFDNLTVEEHLLFFSGLKGCRPGQIREEVNWMLSLLKFKDKRKA
KIKTLSGGMKRKLSIGIALIGNSKIVMLDEPTSGMDPLSRRSTWDLLQNQKYGRTILLTT
HFMDEADLLGDRILIMANGQLQCSGTSLFLKNKYGAGYHMVIVKQPHCKVANITTLVKSL
VPNAVMQTNAGAELSYILPNESTDRFEELFSQLEMKKEKLGIASYGASITTMEEVFIRVG
KLVDSSMDIQAIQLPAIQYQHERRMSDWSVGEKTSLSDLMDTADDSDHHLSNSYSSIKLN
TGIILYLQQFYAMLMKRATYTWRNWKIFTAQFMVPLIFACFSLIVAKTFPGPQDSPPLNL
TLEKYGPTIVPFSLRHVYQKLTKHLMQAYKEVVEAQLGMPRPVEDDIIDYLLNISSKEGG
SFNERCVVAADFHDTLTTGTTIRVLFNNLGYHTSATSLMLVDNALFKTLVGPTASISTTN
YPQPRNITEQALEQLNENRTGFALAFNLMYGMAFLASTFALLLVSERTIKSKHIQVISGL
HTINFWLSALLWDMINYMIPCVLILVMFQIFDLQPFTMEQHLGDVLILLLLYGWSIIPIM
YLLHYFFTTIATAYTRITIINILTGTATFLAITIMNIPELDLIDLAKVLDAVFLVLPNYC
LGQAINDFYQNYQLVAVCTRSPLAEYLCQAFNITYQTDYFSWESPGVGRFIFALAVQGLV
FLTFLLLIEFSFFKVLSNLFHYIVWRKRMASILNGSIPQPVEDSDVRDERLRIEESTVSE
MDCPLVIKNLLKIYRNQSTLAVNRIFLAVNKGECFGLLGFNGAGKTTTFKILTGDENLSG
GDAFIAGYSILKNRNEVRQKIGYCPQFDALLGHMTGRETLNMFARLRGIPEHLIKQSVDD
QLQSFLLESHAQKLVRTYSGGNKRKLSTAVAMIGNPAVIFLDEPSTGMDPVSRRLLWDAV
TRSLQDGKSIVITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKNKFGSGFTLLVKIHG
DKPDLKPFKNFIETTFEGSILKDEHHGMVHYHLTSELLSWSQIFGTLERAKEKYNIKDYS
VNQISLEQVFLSFARFQLGSEERSD
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgacccgacttcggcaatttggcctacttctttggaagaattatgtattgcaaaaacgc
caagtagtggttaccatcgttgagataagcctgccacttctatttgctataattcttata
attctcagacagcgagttaattctgtgcaatatccaaatgcaaccatatatcctccattt
tacatatatgatattccatatttcccccaatacccgacaaccaaatggagtttggcttac
attccctccaatgtgactgcagtggagaccattgcaaagctggtgaaagacagtctgcgg
aggatcgttaaaattgtaggtttccaaacagaagctcaatttaatgattttataagatcg
gaaaataagtcgaccaagaaaattctggtagcccttgtattcgaccatgactttaagcat
caagatgagcgtttaccactgcaggtaaactaccacctaaggtttaagtacggtcctctg
aacgcacccctaggagaactaagctccttcaatccaaaccaagataaagactggcacacg
cggttccttttcccacttttccaggtgcctgggcctcgtgagcagtacttcaaggatgga
ggcagtccaggatattaccgtgagggtttcctagcaacacaactcgcaacagacaaagcc
attatcaagtatcatgctagtaaagaagcagccaaactgctttcaatatttcaagtagaa
atgctgcgattccccttccccccctatactgatgacatcttcattttggcaatccaaaca
cagctttcactattggtcatgctgagtttcacctacacagccctcaatgttaccaaagca
attgtattggaaaaggaaaccaagctaaaggagtatatgaagatgatgggacttaatagc
tggttgcactggttggcctggttcttcaaattcctcctctttctaatcacttcaatattt
ctcatgactgtgctgttttgtgcaaagatgtccaaacaaggagctgtgttgaccaacagt
gatcccaccctagtatttgcatttctcctgctgttttcaatttccacgatttcattcagc
ttcatgatcagtgtcttcttctccaaagctaatgtagctgctgcagttagtggattcctg
tacttcctttcatatatcccttacttcttcatcgcacctcgttaccagagaatgacacat
tcccagaaagtggcatcatgcttgatctcaaatgttggcatggcactgggatgccagcta
attggcatgtttgaagggaaaggtgtgggtgtacagtggtcaaacatattcctgcccgtc
aatgtggatgacaatttaactcttgctcaatcaatggcaatgctagtatttgattcagtt
atttacattttggtcacttggtatgtggaagctgtgttccctggggagtatggaatacca
caggtctggtactttttcatcttgccttcatattggctcgggaagccaagaactgaatac
atcaaaataaacaaagaggatgaggaagcagagaaaccactaaacactgaatacatggaa
gatgacccattggatattgaagctggcatcaaaatcaaagacttgaccaaggtgttcaaa
gttggaaacgagatgaaggaagtagtttcccatctaaccttcaacttacacaagggacaa
atctcagtattgctggggcacaatggtgctggaaagactactactctggccatgctcaca
ggtctgttccctcctacaagtggcactgccaccattaatggatatgatatctgccaggac
atgccactggttcgccaaagtcttggactctgtccacagcacgatgtcctatttgataac
cttaccgtagaagagcatctgttattttttagtgggctcaaaggctgccgccctggtcag
atccgtgaagaggtaaactggatgttaagcttgttgaagtttaaggataaaagaaaagca
aagatcaagactttgtctggtggaatgaaacggaagctctccattggaattgctctcatc
ggcaactctaagattgtcatgttggatgaaccaacatctggtatggatccactatcccgc
agatctacctgggatcttctacagaaccagaagtatggccgcactatcctgctaaccact
cattttatggatgaagctgatctccttggagatcgtattctgatcatggccaatgggcag
cttcagtgcagtggaacatcactcttcctcaagaacaagtatggtgccgggtaccacatg
gtaatcgtgaagcaacctcattgtaaagtcgctaatattaccacacttgtgaagagcctc
gtacccaatgcagtcatgcagaccaatgctggtgctgagctgtcgtacatactcccaaat
gaaagcactgacaggtttgaagagcttttctcacaacttgaaatgaaaaaggagaagctg
ggaattgccagttatggagcttcaatcactaccatggaagaggtgtttataagggtgggg
aagctggtggactccagcatggacattcaagcaatccagctaccagcaatacaataccag
catgagcgaaggatgagtgactggtcagttggagagaaaaccagcctgagtgacttaatg
gacactgcagatgacagtgaccatcatctttccaacagctattcttctatcaaactgaac
acagggatcatcctctatttgcagcagttctatgccatgcttatgaagcgagcaacatac
acctggcggaactggaagatattcacagcccagtttatggtcccactgatttttgcctgc
ttttcattgattgttgccaagacatttccgggtcctcaggattcacctccattaaacctg
actctggaaaaatatgggccgaccattgttcctttttcattgagacatgtctaccagaaa
ctgactaaacatttgatgcaggcttacaaagaggtggtagaagcacagctgggcatgcca
agaccggtagaagacgatattattgattatctgttgaatatttcaagtaaggaaggaggt
tcctttaatgaacggtgtgtagtagctgctgatttccatgatacactgacaactggaacc
acaatacgggttttattcaataacctgggctatcatacctctgctacttctttgatgtta
gtggacaatgccttattcaagactctggtggggccaacagcatcaatcagtaccaccaac
tatccacaaccccgcaacattacagaacaagcattggaacaactgaatgaaaataggaca
gggtttgctttggccttcaacctgatgtatggcatggcctttctggctagcacctttgcc
ctcttgttagtgtctgagagaactataaaatccaagcacattcaggtcatcagtggcctt
cataccatcaacttctggctgtctgctcttctctgggatatgattaactatatgatcccc
tgtgtgttgatcctggtgatgttccagatctttgatctgcaacctttcactatggagcag
catcttggagatgtgttgatacttctactcctttatggctggtccattatccccatcatg
tacctcttacactatttcttcactacaattgccacagcctacaccagaatcaccataatc
aatatcttgactggcacagccaccttcttggccattacaattatgaacattccagaactt
gatctgatagacctagcaaaggttctggatgcagtgtttcttgtgttacccaattactgc
ttgggacaggctatcaatgatttttaccaaaattaccaattggttgcagtgtgcacaaga
agcccacttgccgagtatttgtgccaagcattcaacatcacctatcagactgactacttt
tcctgggaatctcctggagttggccgcttcatttttgctctggcagtccagggcttggtc
tttctgactttcctcctccttattgagttcagtttcttcaaagtattgtccaatttgttc
cattatattgtctggagaaagagaatggcttcaattttaaatggcagcataccacagcca
gttgaagactctgatgtcagggatgagcgtttgaggatagaggagtcaacagtttccgaa
atggactgcccgttagtgataaagaacctcctcaagatttatcgcaatcaatcaactctt
gctgttaacaggatttttttagctgtaaataaaggagaatgctttggactacttgggttt
aatggagctggaaagacaaccaccttcaagatattgactggtgatgaaaacctgagcgga
ggggatgcctttatcgcaggttacagcattctgaaaaacagaaatgaagtgcgccagaag
attggttactgtccccagtttgatgctctgcttggtcatatgacaggacgggaaacactg
aatatgtttgcaagattacggggcatccccgagcacttgatcaaacagagtgtggatgat
cagctgcagagtttcctgcttgaatctcatgcccagaagcttgtgcggacatacagtggt
ggaaataagagaaagttgagcactgcagtggcgatgattggaaaccctgctgtcatcttc
ctggatgaaccttccactggcatggatcctgtttccaggagactattatgggatgcagtg
accagatctctacaagatggaaagtccattgtcatcacttctcacagcatggaagagtgt
gaagcactctgcaccaggctggctgtgatggtcaatggtcagttcaagtgcctagggagt
ccccagcacctcaagaataaatttggcagcggatttacattactggtcaaaatccatgga
gataaacctgatctcaagcctttcaagaactttattgaaactacatttgaaggcagtatt
ttaaaggatgagcatcatggaatggtgcattaccacttaaccagcgaactcctgtcatgg
tctcagatatttggcacactagaaagagccaaggagaaatacaatatcaaggattattca
gtcaaccagatctctcttgagcaagtgttcctcagctttgctcgtttccagctgggttca
gaagaaagatctgattag
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integrated database retrieval system
