Hemiscyllium ocellatum (epaulette shark): 132825440
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Entry
132825440 CDS
T09720
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03440
Homologous recombination
hoc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132825440 (top3a)
03460 Fanconi anemia pathway
132825440 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hoc03032
]
132825440 (top3a)
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132825440 (top3a)
Enzymes [BR:
hoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
132825440 (top3a)
DNA replication proteins [BR:
hoc03032
]
Eukaryotic type
DNA Topoisomerases
132825440 (top3a)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
132825440 (top3a)
FA (Fanconi anemia) pathway
132825440 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-C2H2_10
Zn_ribbon_GRF_2
Zn_ribbon_recom
HypA
Motif
Other DBs
NCBI-GeneID:
132825440
NCBI-ProteinID:
XP_060696695
LinkDB
All DBs
Position
20:complement(33188162..33229127)
Genome browser
AA seq
961 aa
AA seq
DB search
MKSVLTRTMSSAVGRLLQARQVLCVAEKNDAAKSIAEIMSGGRFRRREGLSKFNKIYEYD
YHLIGQNVAIVMTSVSGHLLELEFKSPFQKWHSCNPVTLFDAEVEKYCPENYVDIKRTLE
REVRKCQALIIWTDCDREGENIGFEIIHVCKAVKPNLQVLRARFSEITPRAIRQACENLV
EPDQKISDAVDVRQELDLRIGASFTRFQTLRLQKIFPNVLSNQLISYGSCQFPTLGFVVE
RFKAIQAFIQETFYKIKVTHETEDGCVEFNWKRHRLFNHTACLVLYQICMEDPVATVIDV
FTKPKSKWRPLPLDTVELEKLVSRKLKINAKETMRIAEKLYTQGYISYPRTETNIFPKDL
NLSVLVQQQTMDPHWGAFAQGILDRGGPTPRNGNKSDQAHPPIHPTKYTNNLQGTEQRIY
EFIVRHFLACCSQDAQGQETTVEIDIAGELFAGHGLMIIARNYLEVYPYDKWNTKVMPVY
ERGKKFQPTTIEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAEHIETIKSRMYVGLT
ADQRFLPGELGMGLVEGYDSMGYEMSKPDLRAELEADLKLVCEGKKDKFNVLHQQVQKYK
QVFIEAVTKAKKLDEALSHYFGEVTEVTQSEEFLMEISEPVRKCPQCGRDMVLKPKKGGG
YYLSCTGYPNCKSAVWFPDSVLGVSRDESICPTCKPHPIHRLKLKFKRGSVPPLVPLEFV
GCIGGCDEMLREILDLRYLRGASQSNNQIINHVPQRRSENRSFRDHRSTQSKPQEVVFKP
MSRVVPSNVGSDDNVVVCNCGQNALLLTVRKEGPNQGRRFYKCNVGSCNFFLWADQDASD
SGCGGSVGRGSTASSAGSFRQAGSNGASSGREAMCTCNQLAVTRTVQKDGPNKGRTFHTC
AKPRDQQCGFFQWADENVPPGMTNKRTDGNTSRNGPTAKKPRTCGLCHQPGHTRTKCPQN
R
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcggtgttgaccaggacgatgagcagcgcggtggggcggctgctacaggctcgc
caagttttgtgtgtcgctgagaaaaacgacgcggccaaaagcatcgcggagatcatgtcg
ggcggtcgcttccgaaggagagaaggactttcaaaattcaacaagatatatgagtatgac
tatcatctgattggtcagaatgttgctatagtaatgacctctgtctcaggtcacctcctt
gagttggagttcaaatcaccatttcagaaatggcacagttgtaatcctgtgactctcttt
gatgctgaggtggagaagtactgcccagaaaactatgtggacattaagagaactctggaa
cgagaggtgaggaaatgccaggccctgatcatttggactgactgtgatcgtgaaggggaa
aacattggatttgaaatcattcatgtgtgtaaagcagtaaagccgaatctacaagtgctg
cgagctcgattttctgagattacacctcgcgcaatcagacaagcctgtgagaatctggta
gaacctgatcagaaaataagtgatgctgttgatgtaaggcaggagctggatttgagaata
ggcgcctcattcacccggtttcagaccttaagactacaaaaaatattcccaaatgtgcta
tcaaatcagctgatcagctatggtagctgtcagtttcccactctgggttttgtggttgag
cgtttcaaagcgatccaggcttttattcaagaaacattctataaaatcaaagtcacccat
gaaacggaagatggctgtgtagaatttaactggaaaagacatcgtctcttcaaccacacg
gcatgccttgtactttaccagatttgcatggaggatccagttgcgactgtaattgatgtc
tttactaaaccaaagagcaaatggaggcctttaccccttgacactgtggaattggagaaa
ttggtttcaagaaaactgaaaatcaatgcaaaggagacaatgaggatagcagagaagctc
tatacacaaggatacatcagctaccctcgcactgaaaccaacatcttccccaaagatctg
aacctttctgtattggtgcaacagcaaaccatggacccacactggggggcgtttgctcag
ggaattttggacagaggtgggccaacaccgcgaaatggaaacaagtcagaccaggcccat
ccacctatccatccgactaaatacactaacaatctgcagggaaccgagcaacgtatttat
gagtttattgtgcgtcattttctggcatgctgctcccaggatgcacagggacaggaaacc
acagtcgagatagacattgcaggagagctctttgctggtcatggtttaatgattattgca
cggaattatctggaggtttatccatatgacaaatggaacactaaggttatgcctgtgtat
gagagaggcaagaagttccaacccaccactattgagatggttgatggagagacaagtcca
cctcagttgctaactgaagctgatcttattgctctaatggaaaagcatggcataggaact
gatgctactcatgcagaacatattgaaactatcaaatcccgaatgtacgtgggcttgaca
gctgatcagagattcctcccaggagaattaggcatgggcctcgtagaagggtacgattcc
atgggatatgagatgtcaaagccagatttacgagctgagcttgaggcagatctgaagctg
gtttgcgagggcaagaaggataagttcaatgtgcttcatcaacaagttcagaaatataag
caggtgttcattgaggctgtgacaaaggcaaaaaagctggatgaggctctatcccattac
ttcggggaggtgactgaagtgacacagtctgaggagttcctgatggaaatttcagaacct
gttcgaaaatgtcctcagtgtgggagagatatggttctcaaaccaaagaaaggtggaggg
tattacctttcatgtacggggtacccaaattgcaagtctgcagtctggtttcctgattct
gttctgggggtcagcagagatgagagcatatgtcccacgtgtaaaccacaccctattcac
aggttaaagttaaagtttaaacgaggtagtgtgcctccgctggtccccttggaatttgtt
ggttgtattggaggatgtgatgaaatgctgagagagatcttggacctgaggtatttacgg
ggagcatcacaatcaaacaatcaaattatcaaccacgtaccacagagaaggtcagagaac
agatcgttccgggatcacaggagcacccagtcaaaacctcaggaagtggttttcaagcca
atgtccagggttgtcccttcaaatgtgggatctgacgataatgtagttgtgtgcaattgt
ggccagaatgcacttctactgactgttcggaaagagggaccgaaccaggggaggaggttt
tataaatgtaatgttggcagttgcaactttttcctgtgggctgaccaggatgcaagtgac
tcaggttgtggaggatcagttggtagagggagtacagcctctagtgcagggagctttcgt
caagctgggagcaacggagcttcaagtggaagagaagcaatgtgcacttgcaatcagcta
gcagtgacacgcacagtgcagaaagatggacctaacaagggtcggacatttcacacctgt
gccaaacccagagaccagcagtgtggcttcttccaatgggctgatgagaatgttccacca
gggatgacaaataaacggactgatggaaacacctccagaaacggtccaactgcgaaaaaa
ccacgaacatgtggcctgtgccaccaaccaggacatacaaggactaagtgcccccaaaac
cgctga
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