Hemiscyllium ocellatum (epaulette shark): 132825527
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Entry
132825527 CDS
T09720
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03013
Nucleocytoplasmic transport
hoc03015
mRNA surveillance pathway
hoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132825527
09122 Translation
03013 Nucleocytoplasmic transport
132825527
03015 mRNA surveillance pathway
132825527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132825527
03041 Spliceosome [BR:
hoc03041
]
132825527
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
132825527
Spliceosome [BR:
hoc03041
]
Common components
Common spliceosomal components
Cap binding complex
132825527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Vfa1
DUF1664
AAA_11
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
132825527
NCBI-ProteinID:
XP_060696872
LinkDB
All DBs
Position
2:complement(141334634..141409042)
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AA seq
792 aa
AA seq
DB search
MSRRRHSDDNDGQPHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEADL
PNYKSKILRILCAVARQLPEKLTVYTTLVGLLNARNYNFGGEFVEAMVRQLKETLKTNLY
TEAVFAVRFLSDLVNCHVIAAPSMVAMFENFISVTQEEDVPQVRCDWYVFAVLSSLPWVG
KELYEKKDVEMDRILLQIESFLKRRQKHHVPMLQCWTAEQPHPQEEYLDCLWAQIQKMKK
DRWQEKHILRPYLAFDSVLCEALQHNLPPFTPPPHTKDSIYPVPRVIFRMFDYTDAPEGP
VMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGKNKIPLNYHIVEVVFGELFQ
LPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRIDSMNTICIDRFINWFSHHL
SNFQFRWSWDDWSDCLALDPDQAKPKFLREVLEKCMRLSYYQRIVDIVPENFAALLPANP
LCIYKYGDESNSSLPGYAVAVNVCNAIKSKASNDEILSILKDLPNPNQEDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEIFKTLAEGDEGKLHVLRVMFDVWKCHPQM
MAMLVDKMIRTQIVDCAAVANWIFSSEMAHDFTRLYVWEILHSTIRKMNKHVQKVQKELE
ETKDKLDKQHKRRDSDDDYDQNSDEDEDGPLEEQIERLQEKVESAQSEQKNLFLVIFQRF
IMILTEHLARCETGGIDFNTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDHH
ILAVYQQFCALQ
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggagacggcacagtgacgataatgacgggcaacctcacaaacggagaaggaca
tctgaaccaattgaaattgaagatcggttggaatctttgatatgtcgtgttggagaaaag
agcacatcctcattggagagcaacttggaaggtctagccggagttttagaagctgacctg
ccaaactataaaagtaaaatcctaagaatactttgtgctgtagcacgacagcttcctgaa
aagttaaccgtatacacaacactggtggggctattaaatgcaaggaactacaactttggt
ggagagtttgttgaagctatggttagacaactcaaggaaactttgaaaacaaatttatac
accgaggcagtttttgctgttcgattcctgtctgatcttgtgaactgccatgtgattgca
gctccttcaatggtggcaatgtttgaaaattttattagcgtaacacaagaggaagatgta
ccacaggtacgctgtgactggtatgtgtttgcagtactctcttctctgccctgggttggg
aaggagctgtatgagaaaaaagatgtagagatggatcgaatcctattacagattgaaagt
tttctgaagagacgtcaaaagcatcatgtgccgatgttacaatgctggactgctgaacaa
cctcatccacaggaagagtacttggattgcctttgggcacaaattcagaaaatgaaaaaa
gatcgttggcaggagaaacacatcttaaggccgtatttggcatttgatagcgtactctgt
gaggccttgcaacacaacttgccacctttcaccccaccacctcacacaaaggattccatc
tatcctgtgccacgagtcattttcagaatgtttgactacacagatgcccctgagggccca
gtaatgcctggtagccactctgttgagagatttgtaattgaggagaatctgcattgcatc
atcaaatctcattggaaggaaaggaaaacatgtgctgcccagctgcttagttatcctgga
aagaacaagattcctctaaattaccatatagttgaggttgtcttcggagaacttttccag
ttgccgtcacctcctcacattgaagtcatgtatacaacactgttaattgaactctgcaag
ctgcagcctggctctttaccgcaggtgcttgcacaagctacagagatgctatatatgcgg
atcgatagtatgaatacaatttgcatagacagatttatcaattggttttctcatcatttg
agtaactttcagttcagatggagctgggatgattggtctgattgtttggctttggatccc
gaccaagccaaaccaaaatttttgcgtgaagtgttggaaaaatgtatgaggctttcctat
tatcaaaggatagtggatattgtacctgagaactttgcagctctgttacctgctaatcca
ctgtgtatttacaagtatggcgatgagagcaacagttctctgcctggttatgctgtggct
gtcaatgtctgcaatgctattaaaagcaaagcaagcaatgatgaaatcttgagcatactc
aaagacctaccaaatcctaatcaagaggatgatgatgacgatgaaggattcagctttaat
cctttgaagattgaagtttttgtgcagactttacttcacttggctgccaaatcctttagc
cattccttcagtgctttggcaaagtttcatgagatttttaagactttggctgaaggtgat
gagggcaagctacatgtactaagagtcatgtttgatgtttggaagtgtcatcctcagatg
atggctatgttggttgataaaatgatcagaacacagattgtagactgtgcagcagtagca
aactggatcttctcttcagaaatggcacacgatttcactaggttgtatgtctgggaaatt
cttcactccaccatccgaaagatgaacaaacatgtacaaaaggtccagaaggaacttgaa
gagactaaagacaaactggataaacagcacaaaagacgagacagtgatgatgactatgat
cagaacagtgatgaagatgaagatggtcctttggaagaacagattgaacgtcttcaggag
aaggttgaatctgctcaaagtgaacagaaaaacctcttcctagtaattttccagcgtttt
ataatgatcttgacagaacatcttgcaaggtgtgaaactggtgggattgattttaacaca
ccttggtataagaactgcattgaacgtttacagcaaattttcctccagcatcaccaaatc
attcaacagtacatggtcactttggagaacctgctgttcacagctgagctggaccaccac
atactagctgtctatcagcagttctgcgctcttcagtaa
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