Hemiscyllium ocellatum (epaulette shark): 132825532
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Entry
132825532 CDS
T09720
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1-like isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04120
Ubiquitin mediated proteolysis
hoc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132825532
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
132825532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hoc04121
]
132825532
Enzymes [BR:
hoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132825532
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132825532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
132825532
NCBI-ProteinID:
XP_060696880
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Position
20:complement(56483331..56642140)
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AA seq
554 aa
AA seq
DB search
MGSVLSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAAHEPVKTLRSLVNIRKDSLRLVRYKDEADSLTDENAKPKVLYSV
EFTFDADARVAITIYCQATEEFHGGMAVYTSKHPSMHSETIHYKRGVSQQFSLPSFKIDF
SEWKEDELNFDLDKGVFPLVIRAVVDEVDEYSGHAHILLAAMEKHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCSTC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDDHSTLEHIPP
GFEPVSLLEALNGLRSISPSIPSAPLYEEISYSGIGDGLCTSVRQLSAKDKMIDNCPQKP
KLSKSSESSLRSPSSPIQEEDEEKLSEDSDVLLQKNGPQQPNEISSQESSTIAETPEIEA
QDQVDRTYSEEIVQDSNNEHERHIEEDGETPLEMTLPGTSDSTESLKSQSTNSSSQPLLA
VSSTVHIEDENQIA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgggctcggtgctcagccggagaatcgcaggagtcgaggatatcgatatccaggctaac
tcggcctacagatacccaccgaaatccggaaattactttgcaagccatttcttcatgggt
ggggagaagtttgatactccacatcctgagggatacctgtttggtgaaaatatggacttg
aatttcttgggaaaccgccctgtacagtttccatatgtgacaccagcggctcatgagcct
gtgaagaccttacgcagtttggttaatattcgaaaagactctcttcgcttggtcaggtac
aaagatgaagctgacagtctgacagatgagaatgcaaagccaaaagtgctctacagcgtg
gagtttacctttgatgctgatgcacgtgttgcaataaccatctattgtcaggcaacagag
gaattccacggtggtatggcagtatatacatcaaaacatccttccatgcattctgagacc
atccattacaagcgaggtgtgagccagcagttctcacttccttcttttaagattgacttc
tccgaatggaaggaagatgagttaaactttgatctagacaaaggagtttttcctttagtc
attcgggcagtggttgacgaagtggatgaatactctgggcatgcccatattctattggct
gcaatggaaaaacacgtcgatggaagtttttctgtgaagccattaaagcaaaagcagatt
gtcgaccgagtcagctatctgctccaagaaatatatggcattgaaaataagaataaccaa
gaaacaaagccttccgatgatgagaacagtgacaacagcaacgagtgtgttgtgtgcttg
tctgacctacgtgataccttaatcttaccctgcagacatctgtgcttgtgcagtacctgt
gcagacacactccggtatcaggcaaataactgtccgatctgcagattgccatttcgagca
ttattgcagatccgagctgtgaggaaaaagcctggggccttgtcaccagtttcatttagt
cctgtcttagcacagactatggaccacgatgatcactcaacattggaacatattcctcct
ggatttgagccagtttccttactggaagctttaaatggacttcgttcaatttctccgtct
atcccttctgctcccctttatgaagaaatcagctattctggaattggggatggcttgtgt
acatcagtcaggcagctgtcagcaaaggacaagatgatagataattgtccccaaaagccc
aaactgagcaaatcttcagaaagcagtctgcgctctccatcttctccaatacaagaagag
gatgaggaaaagctttcagaagattctgatgttctgttacaaaagaacggaccacaacag
cccaatgaaattagctcacaagaaagtagtacaattgcagaaaccccagaaattgaagca
caagatcaagtcgatagaacatactctgaggaaatagtacaagatagcaacaatgagcat
gaaagacacattgaggaagatggggaaactcctcttgagatgaccctgccaggaacctcc
gactcgactgaaagcttgaaaagccagagcactaacagttcatctcagcctcttcttgct
gtctccagtactgttcacatagaggatgagaaccagattgcttga
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