Hemiscyllium ocellatum (epaulette shark): 132825632
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Entry
132825632 CDS
T09720
Symbol
focad
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132825632 (focad)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
132825632 (focad)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HEAT
Antimicrobial19
Motif
Other DBs
NCBI-GeneID:
132825632
NCBI-ProteinID:
XP_060696985
LinkDB
All DBs
Position
2:142738957..142931689
Genome browser
AA seq
1808 aa
AA seq
DB search
MSEDFKRRLEFQNVTIQSQAVGHLVAAVLKEKGSSSLINHASDQSPALNLLWEKCCSDNV
VVRTACCEALAALVAQNHADFNYVLNGILNLIPSASNVQGLIRTISQLLQMQAQGTDPND
KTVYSCPYAIRNPPHPFVFVLENRPDSWPFLLQQIASIFRQPPKRLNASIVQMMAPFFKY
LYCEPCCLRENSELRLSLLQIVLQSQSQEEQNAPTLFTQQVLQLFFDLVPHLQVTSLAQV
TEATIFLQELSLAFLRHAHFWKSELAQISLQLLCICEVSLKITGELSSLIHQIQMIVDNV
PESIPAEEMLVGLSLLLLQTPVCHQEPILNLALKILSLSSVHNLLKAALILVMPLLQIAS
SVNCTSSAEVGPATQELAEKLLDIIQNEERKDLTSRSKPSCELVFPITGWYKTIFATWKL
LDDFSTDVKAASVWLSSIKSIFALNDKVPEHIALVITYIVLKEDAESLRIALDTAKDLAK
ADASQVPHLISVLMFKLGRPLEPTLYHAILYTLPALGTHKVCVAQIIRALQMLWKTTRLK
AVSLRLMTILWENQDRVYPELQKFMALVDVPSVSCVKEDHWEQMIAKAATIRDICRKRSY
QHGADMLAAISKVLNECTRPDQVTPAVLVLQGLHALCQAEVVDIRSTWCALSPKLSSDTR
PLVVKALTELFALVPLLAVKSTEYEKFRVQVISILWSHTQSKNSLIASSAYKALSAFNSE
EYTVLHLPEQVRPERKPDYDNDEMDMNVDEEEEQKEEDLSVPGASYMKLLLMTPLPVLSA
FEEFLTSLVTQELAVMPRGVYYSALRGGTVRSDQGKTVAGIPNFMLKTYEKNKQPGLKSG
LAAGLLLCYDLHIQTDKDGKPINRFLVSRGRSYQQMLAALIHEVPIQPSEWHKSILLSQA
WLGFMGRTYQAVLQGRQAELEMQQKHGKDDPEELQYKQFVSWLWVRDLLTDVVKSASKDS
PVVQGNSILALTGLAVTVAKYESSLPSEAHDAPEIGADILPTEHWTSMVVETLLSIVDSH
YRPKGRIFPWFQHKSYSGENTASAIARSCAAMALTLLVPVFITSRKESIEEVLGILIAGL
PGKPNADTSQAVLFHMGLAAGMFLSRLYEERMSDVSGQKMNLLLMKSLDALEKSSFDTSL
EHNTGCILGVGLVLSLMSQSSQTESRVHVSVTLSELCRSLDESTSQSRVYQEVLAYSVAC
VSVSAFSAGIIQANEAEEIMIKLRTLTEQSQQTAGFAMALGNIVHGLAACGHGKAEDLSN
RLLPAWLKILLAEGCPTMHRLAAVNGLVALVGSESSLTQLKSETIQSSQFQSKMNEVIRA
MTQTISFSGVIGLQSNAAYALGHLHLTNMSSSQSRTSVPPDFGYLPERSVIRSATDYIIE
AGKKGPERIPAQLVKVLLGPIAGCGNSYQYPPVNWASMLSPLIRLNFGEDVQQHCIEIAV
TQAQTSQSAAMFLGMWVAPPLVYSLNLETRKYLFMSLASWMKHVPEDKLQTFVEVLAVQC
FTLESRQKSPDLCHTVLQGLHEAMKVPTQVQHSWSILCKSVETIFDLLPNEIQVNELKFY
VGIANCLSELGDTEIDRITQVTKDTIVKSTFVRAFLVSQGRVPLLCLNDVIAATVGSCHM
ETVIWIMLQSFYQCRLISHQNTGVVKRMEWLLELMGHIRNVAYGSAPTQNADQKETVGFL
LRVFAAAAAAWSDHTTPLMLGVRASWVPQSEEKNLIDCTQLSLGGSSVESLSVQQCLYLL
PQSILLLLAKEPWKDHTQKFIDWLFNMAECPQGALSLDKLNMIKATVLALRFLPEYRKKA
VWTRAYGW
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagattttaagaggagattagaatttcaaaatgtaacaatccagtcacaggct
gtgggacatctggttgctgctgtattgaaagaaaaggggtcatcgtctctgataaatcat
gcttcagatcagagccctgcgttgaacctgttatgggagaagtgttgcagtgacaatgtg
gtggtacggactgcttgctgtgaagcattggctgcacttgttgcacagaaccacgctgat
tttaattatgtgctcaatggaattctgaacctgattccttctgccagtaatgtccaaggc
ttgattcgaactatcagtcaactgctgcagatgcaagcacagggaactgatccaaatgat
aaaacagtgtattcatgtccgtatgccatcaggaaccccccacatccttttgtttttgta
ttggaaaaccgacccgacagctggccgtttctccttcagcagatagcttccatttttcga
caacctccgaagaggttaaatgcatccattgtgcaaatgatggcaccatttttcaaatac
ctgtactgtgaaccctgctgcctgcgagagaactctgagcttcgacttagccttcttcag
attgtacttcaaagccaatctcaagaggaacagaatgcacccactctctttacccagcag
gtcctccaactcttctttgatcttgttcctcacttgcaggtaaccagtttggcacaagtt
acagaagccaccatatttcttcaagagttatcgctagcattcctccgccatgctcatttt
tggaaatcggagctcgcccagatatctctgcaattgctatgtatttgtgaagttagcctg
aaaatcacaggagagctctcctcacttattcaccaaattcagatgattgtcgacaatgtt
cctgaaagtattcctgctgaagaaatgcttgtgggactgagcctacttctgctacagact
ccagtgtgccaccaagaacctattttaaatcttgcactgaagatcctctctttgtcatct
gtgcacaatctgctcaaggcagctctgatactggtgatgccattacttcagatagcctcc
tctgttaactgtacatcaagtgcagaggtgggaccagccacccaggaactggctgagaaa
ctccttgatattatccagaatgaggaacgaaaagacttgactagcagatcgaagccttct
tgtgaacttgtgttccctataactggttggtataaaactatttttgcaacttggaaactt
ttggatgatttcagtacagatgtgaaagctgcttctgtttggctgtcttctatcaagtca
atattcgctctgaatgacaaagttcctgaacacattgccctagtgattacctatatagtc
ttaaaagaggatgcagagtctcttcgtattgctctggatactgccaaagacttggcaaaa
gctgatgcttcccaggtaccacatctcatttctgttctgatgtttaagttgggaagacca
ctggaaccaaccctgtatcatgctattctttatacacttcctgcactgggcacacacaag
gtttgtgtagctcagataattcgtgctttacaaatgctgtggaaaacaacacgtcttaaa
gctgtgtctctgcgtctgatgacaattctatgggaaaatcaggatcgtgtttatccagaa
ctgcaaaagttcatggcattagttgatgtgccctctgtatcatgtgtcaaagaggaccat
tgggaacagatgatagccaaagcagcaacaatcagggacatctgcaggaagaggtcttac
cagcatggagctgatatgttggcagcaatctccaaggtactgaatgaatgtacaagaccc
gaccaggtcacccccgctgttcttgtccttcagggactgcatgcattatgtcaagctgag
gtggtggatattcgttccacatggtgcgctttgtccccaaagctcagctctgacacacga
cctctggttgtcaaggccctgactgaactatttgctctcgttcctttgctggctgtgaag
tctaccgagtatgagaaattcagagtgcaagttataagcatattgtggagccacacccag
agtaagaactcacttattgccagctctgcgtacaaggccctttctgcattcaactctgag
gagtatacagttcttcacctgccagaacaggtaaggccagaaagaaagcctgattatgac
aatgatgagatggatatgaatgtggatgaagaagaagagcaaaaggaagaagatctttca
gtccctggagcatcgtacatgaagctgcttttaatgacacctctgcctgtgctttctgct
tttgaagagtttttgacatctctcgtgacccaagaattagcggtgatgccccgtggggtc
tactactcggcactccgtgggggaactgtacgctctgaccaaggcaagactgtggcaggg
attcctaacttcatgctgaagacgtatgaaaagaacaagcaaccgggactaaaatctggc
ctggcagctggtttattactttgttatgatctacatattcagacggataaagatggcaag
cctatcaatcgctttctggtgagccggggccggagttaccagcaaatgcttgcagccctt
atccacgaggtgcctatccaaccttctgaatggcataaatcaattttactttcccaggct
tggctaggtttcatggggcgaacctaccaagcagttcttcaggggagacaagctgagctg
gagatgcagcagaagcatgggaaagatgatcctgaagagctgcagtacaagcagtttgtt
tcctggctctgggtcagggacctgctgactgatgtagttaaatcagcttcaaaggacagc
cctgttgtgcaggggaattccatcctcgctttgactggactggctgtgactgtggccaaa
tatgaaagcagcttgccctcggaagctcatgatgcaccagaaattggggctgacatttta
ccaacggagcactggacttcaatggtagtggagacactactgagcatagttgacagtcac
tatcgcccaaaggggcgcatctttccatggtttcaacataaatcctactccggggagaat
acagccagtgccatagcccgctcgtgcgctgccatggctttgaccctcctagtacctgtc
ttcatcacttcacgcaaagagagcatcgaagaggtcctgggcattctcattgcaggtcta
ccaggaaaaccgaatgctgacacctcccaagctgttctgtttcacatgggattagccgca
ggaatgttcctgagtcgcctgtacgaggagcgaatgagtgatgtctccgggcagaagatg
aatttactgcttatgaagtcactggatgctctggagaaaagttcatttgataccagcttg
gaacacaatacaggctgcatcctgggagtggggctggttctgtccctgatgagccaaagc
agccaaacagagagccgtgtgcatgtgtctgtcactcttagtgaactctgtcgcagcttg
gatgaaagtacatctcagagcagggtataccaagaggtattggcttattcagtggcatgt
gtgagtgtttctgctttcagtgctgggatcatacaagctaatgaggctgaagagatcatg
atcaagctgcggactttgacggaacagagccaacagactgcaggttttgccatggctctg
ggaaacatagttcacggcttggctgcctgtggacatggcaaggccgaagaccttagcaat
cgactacttcctgcttggctgaagatactcctagctgagggttgcccgacaatgcatcga
ttagctgcagtaaatggtcttgttgctttggtgggatctgaaagctccctaacacagctg
aagtcagaaacaatccagtcatcccaatttcaatcgaaaatgaatgaagtcataagagca
atgactcagacaattagtttctctggagtaattggactccaatcaaatgctgcctatgct
ttaggacatctacatctgaccaacatgtcatccagtcagagccggacatcagtgcctcca
gactttggctatttgccagaaagaagtgtcatcagatctgccactgactatattattgaa
gcaggaaagaaaggacctgagagaattcctgcccagctcgtgaaggttttgttggggccc
attgctggatgtgggaacagttaccaatatccacctgttaattgggcttctatgctttct
ccacttataagactgaattttggtgaagatgttcagcagcactgcattgaaatcgcagtc
acccaggctcagacatcacagagtgctgcaatgttcttaggcatgtgggtggcaccacca
ttagtgtacagccttaatctggagacaagaaagtacctctttatgtctcttgcttcctgg
atgaaacatgtgccagaagataaacttcagacgtttgtggaagtgcttgcagtccaatgc
tttaccttggagagcaggcagaaaagcccagacctttgtcacaccgttctacaagggcta
catgaagcaatgaaggttccaacacaagtgcaacacagctggagcatattgtgcaaaagc
gttgagacaatttttgacctgctgcctaatgaaatccaggtcaatgaactgaagttttat
gttggaattgccaactgtctatcggaactgggtgatactgagatagacagaataacccaa
gttacaaaggatacaattgtaaagagtacgtttgtccgggcattcctggtttctcaaggc
cgggtaccgttgctgtgtcttaatgatgttattgctgctacggtcggcagctgtcacatg
gagactgtcatctggattatgttgcagagtttttaccagtgtcgactcatcagccaccag
aacacaggtgtagtaaagcggatggaatggctgttggagctgatgggacatatccgaaac
gttgcttatgggtcagctcctacgcagaacgcagaccagaaagagactgtgggcttccta
ctgagggtatttgctgctgctgctgctgcatggagtgatcatacgacaccgctgatgctc
ggtgttcgggccagctgggtgccacagagcgaggagaaaaatctcatcgactgcacgcaa
ttgtctctaggcggaagttcggtggaatccttgtctgtgcaacaatgtctttaccttcta
ccacaaagcatcctcttactgctggctaaagagccctggaaagaccacacacaaaagttc
attgattggctttttaacatggcagaatgtccacaaggagcgttatcactggataagttg
aatatgatcaaagctacagtgctggcactgcggtttttacctgagtacaggaagaaggct
gtctggacgcgtgcatatggatggtaa
DBGET
integrated database retrieval system
