Hemiscyllium ocellatum (epaulette shark): 132825722
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Entry
132825722 CDS
T09720
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132825722 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132825722 (exosc2)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
132825722 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
132825722 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
132825722
NCBI-ProteinID:
XP_060697124
LinkDB
All DBs
Position
21:complement(62305477..62324593)
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AA seq
291 aa
AA seq
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MAVDIRLAMARKRVFLPVEVGKHLVSPGDTITTDTGFMRGHGTYMEDDKLIASVAGAVER
VNKLICVKPLQTRYNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGELRR
RSAEDELMMRDYLQEGDLISAEVQAVFADGALSLHTRSLKYGKLGQGTLVQVSPSLVKRR
KTHFHNLPCGAAIILGNNGYIWIYPFTEQKDDEAGGFVTNLEPVPLSDREVISRLRNCII
ALNIHKLLLYDTSILYCYEASMHQQIKDILKPEIMEEIVMETRQRLIDQEG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggacattcggttggcgatggcgcgaaagcgtgtctttttaccggtggaggtc
ggtaaacatctggtatcaccgggcgacactatcactaccgacaccggtttcatgagaggt
catggtacctacatggaagatgacaaactaattgcatcagttgctggagctgtggaaaga
gtgaacaagttgatatgtgtcaagccacttcaaaccagatataacggggaagttggggat
gtcgttgtgggcagaatcacagaggtgcaacagaagcgatggaaagtggagaccaactcc
agactggactcggtactgcttctatcatctgttaaccttcctggaggtgaactgagaaga
agatctgcagaggacgaactgatgatgagggattatctgcaagaaggagacttgatcagt
gcagaggtacaggctgtgtttgcagatggtgctctgtccttgcacaccaggagtctgaag
tatggcaagctgggccagggaacgttggtccaggtatccccttcactcgtaaaacgccgc
aagactcactttcataacctgccctgtggagctgccatcatcctggggaataatggctac
atctggatttatccatttactgagcagaaggacgatgaggcaggaggatttgtgacgaac
ctggagccagttcctttatcagacagagaggtgatctcacgactccgcaattgcatcatt
gctctgaatattcacaagctgttgctgtatgacaccagcattctgtattgctatgaagct
tcaatgcatcaacagatcaaagatattctgaagccggaaataatggaagaaatagtgatg
gagacaagacaacgtctaattgatcaggagggataa
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