Hemiscyllium ocellatum (epaulette shark): 132825813
Help
Entry
132825813 CDS
T09720
Symbol
tncb
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04510
Focal adhesion
hoc04512
ECM-receptor interaction
hoc04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132825813 (tncb)
04518 Integrin signaling
132825813 (tncb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132825813 (tncb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hoc00536
]
132825813 (tncb)
Glycosaminoglycan binding proteins [BR:
hoc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132825813 (tncb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_Tenascin
EGF_2
EGF
Fn3_PBP1
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Fn3_VIN3
Pur_ac_phosph_N
hEGF
DUF7949
Fn3_ROS1
EGF_PEAR1L
EGF_integrin
REJ
Motif
Other DBs
NCBI-GeneID:
132825813
NCBI-ProteinID:
XP_060697293
LinkDB
All DBs
Position
21:35160510..35598616
Genome browser
AA seq
1882 aa
AA seq
DB search
MGFKWHILVCFITAILVEQTHEGLIKKVIRQKRDILQPKEENITLPLGTQPINFNHVYNI
NVPLGSLCSVDLESPDGIARPKADSSDQHIEQTVDGENQIVFTHRINIPRQACGCAAGPD
IRDLLNRLETLENHVSLLRDQCANGGCCGNGAQQGRGRIDVKPFCGAHGNYSTDSCGCLC
NPGWKGENCTEPDCPENCNERGTCINGKCLCEEGFTGEDCSIEVICPNDCSDQGRCINGV
CHCFSGYTGEDCGQELCRFDCGDYGTCINGVCVCDEGYTGEDCKVKLCPNNCSNQGICIK
GQCVCDEGLTGEDCSELACLNNCYNRGRCVDGECICDEGFTDQDCSEIICPNDCYDRGRC
IEGVCYCDEGFTGEDCGELVCVNNCSNNGLCVNGQCVCNEGYTGEDCGEWACLNNCHNRG
VCIDGECICNEGFTGEDCGEVACPNNCNDRGHCDDGHCICDEGFTGEDCSELLCPNNCNN
NGRCVNGECICNDGYTGDDCGKLACPNNCNNRGRCVSGQCICEESYSGEDCSELICPNDC
YDRGQCVNGQCICDEGFTGEDCGQLACPNNCNYHGRCVNGQCVCDAGFTGEECGEVACLN
NCNNRGRCVNGQCVCDPNYTGLDCGDLACPANCNNRGSCVNGQCVCDEGYIEEDCSAVSP
PRNLKVTEVDPKTVDLEWYNEVRVNEYLITYAPTTPGGLQLEIRVPGDQMSSTIQGLEPG
LEYLINVYAILNNQKSIPVSARIATHLPTPDGLRFTSIRETSVNVEWEPLDIEFDGWDVI
FKAPKEENGEISSSLKQPQVSFVQTGLAPGEEYEVSLHAVKNNTRGPAAKQRLTTMIDAP
SHVEVNKVTDSTAHITWFKPAAQIEGISLSYGIPNSEMTTIELPDTETAYSIAELHPDTE
YEVSLVSNRGNMRSVPAVNTFTTDLDAPKNLRNESQTDDSITLVWENTRATVDNYKVKYS
PLAGGEHKEITVERSNQPTTKIKIPDLQPGTEYGFGVSAIKDYRESAPATINVATDLDSP
KDLKVMETTENTITLRWKRPLAAIDHYYIIYISSTGEKNEEIVAADAVSYILTGLVPATE
YTIIVIAQRGKQKSSASTTSASTESFDNTTTHSPISGAAKPENLLVKNVTSNSLEISWTA
PSGLFDSFLLIIKDINGSSVPLKISLPGDQHTTDVTGLVAGTEYEIDLYGVFQGHLSQPL
KDIARTESELENLMVSEVTSGSFKLSWTADESFQNFVIDVKDSDGLFEPLTYTVPGDQYS
IDIPHLHAATDYEISIYGISHGQQTKPLYTEAQTEAEPEVDNLSVSDVTSNSFTLSWTTD
ENVFDYFSISIGDSRKETAPRDYIVSGELRTTNITDLPDGTEFEISLVGISEGRYSQPLN
TIATTALGAPKFLQFTDVTDTTVTLWWDIESSYITSFKIIYVPTDGGPSNTVTVDGGKTQ
TILRRLTPATEYEVKIIAVRGLDESEAVSGTVRTALDSPSELRVVKVMDSEALLTWKPTI
AAVDEYVLNAHTEGASALQQTKRVSGNQVQTTLSSLFPGTLYTVWIRAVKGIMESSAAST
TFTTAIDPPRDLRVGEITATNALVSWKPPQAKIEGYIMTVESEDGRPQRVEYFRATDTSY
SMSELVPSMRYILRLQAYTGSERSNVIETSFITVGSLYPFPKDCSQTLLNGEAISGLYTI
FLRGNRSQPLEVYCDMTTDGGGWMVFQRRQSGRVDFFRNWKNYTNGFGNPADEFWLGLEN
LHKITSQGHYQLRVDFRDEGDSAYAVYDRFLISDAKSRYKLHVGGYNGTAGDSLSYHQGR
PFSTRDRDNDVAVTNCALSYKGAWWYKNCHKVNLNGRYGAKSHSQGVNWFHWKGHEHSIA
FVEMKLRPHNFRNPQQRKKRAQ
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atgggctttaaatggcacattttagtttgtttcatcactgctattttagtggaacaaacc
catgagggacttattaagaaagttattagacagaagagagacattttgcagccaaaagaa
gaaaatatcactttaccacttggaacacaacctataaacttcaaccacgtctacaacatc
aacgttcctcttggctccctttgttcagtggacttggaatcccctgatggcattgcaaga
cccaaagctgactccagtgaccaacacatagagcagacagttgatggtgaaaatcaaatt
gtctttactcatcgaatcaacatcccacgtcaggcctgcggctgtgcggcagggccagat
atccgtgacttactcaacaggctggagacattggaaaatcatgtatccttattacgtgat
cagtgtgctaatggaggatgctgtggaaatggtgcacagcaaggaagaggtcgtattgat
gtaaaacctttctgtggtgcacatggaaactacagtacagatagctgcggctgtttatgt
aacccaggctggaaaggagaaaattgcacagaacctgactgcccagaaaattgcaatgaa
agaggcacctgcattaatggcaaatgcttatgtgaagaaggtttcaccggtgaagactgt
agcatcgaagtaatctgccctaatgactgcagtgatcaaggcaggtgcataaatggagtc
tgtcattgctttagtggttacacaggagaagactgtggccaggagttgtgtcgatttgac
tgtggtgattatggaacctgtattaatggagtttgtgtttgtgatgaaggttatacaggt
gaagattgtaaagtgaagctctgccccaacaattgcagcaatcaaggtatttgtattaaa
ggacagtgtgtttgtgatgaaggtttaactggggaagactgtagtgaactagcctgtctc
aacaactgctataatcgtggccgctgtgtggatggagagtgcatctgtgatgaaggtttt
actgatcaggactgttcagaaattatttgccccaatgattgttatgaccgtggacgctgt
atcgaaggggtctgttactgcgatgaaggcttcactggtgaagattgcggggagcttgtc
tgtgtaaataactgcagcaacaatggtctctgcgtcaatggacaatgtgtctgcaatgaa
ggctacacaggagaagactgtggtgaatgggcttgcctgaacaactgccacaatcgtgga
gtctgtatcgatggggagtgcatctgcaatgaaggtttcactggtgaagattgtggtgaa
gtggcctgtccaaataattgtaacgatcgtggacactgtgatgatggacactgtatatgt
gatgaaggcttcacaggagaagactgcagtgagctcctctgtccaaacaattgcaacaat
aatggtcgttgtgtcaatggagagtgcatctgtaacgatggctacactggagatgactgt
ggcaaattagcttgtccaaacaactgcaacaaccgaggacgctgtgtcagcggccaatgc
atctgtgaggagagctattctggagaagactgcagtgagctgatttgccccaatgactgc
tatgaccgtgggcagtgtgtcaacggccaatgcatctgcgacgaaggtttcactggtgaa
gactgtggtcaactggcctgtccgaacaactgtaactatcatggccgctgtgtcaatggt
cagtgtgtctgtgatgctggttttactggtgaagaatgtggtgaggtggcgtgtcttaac
aactgtaataaccgtggtcgctgtgtcaatggtcaatgtgtctgcgatccaaattacact
ggtctagattgtggagatctggcctgccctgcaaattgcaacaatcgtgggagttgtgtg
aatggtcaatgtgtctgtgatgaaggctacattgaagaagattgctctgctgtttctccc
cccagaaatctaaaggttactgaagtggatcctaaaactgtggacttagagtggtataat
gaagtgcgagtaaatgaatatcttatcacctacgctccaactacccctggtggtctacaa
ttggagataagagtacctggagaccaaatgtcatccaccatccaagggctagagccagga
cttgaatatttaatcaacgtttatgctatccttaacaaccagaaaagcattcctgtcagt
gccaggatagcaacacatctacccacaccagatggtctaagattcacgtccatccgtgag
acctctgtaaatgtggagtgggaacctttggacattgagtttgatggttgggatgtcatt
ttcaaagctccaaaagaagaaaatggagaaatttcctccagcctgaaacagcctcaggta
tcatttgtacagactggtctggctccaggagaggagtatgaggtcagtcttcatgctgtg
aaaaataatacccgtggcccagcagctaagcaaagactaacaacaatgattgatgcacca
agccatgtagaagtgaacaaagtcacagactccactgctcatattacctggttcaagcca
gctgcccaaattgaaggaattagcctgtcctatgggattccaaacagtgagatgacaact
attgaacttcctgacacagagacagcctattccatagctgagcttcacccagataccgaa
tatgaagtttctctggtttctaatcgagggaacatgagaagtgttccggctgtcaataca
ttcaccacagaccttgatgctcccaaaaacctcagaaatgagtctcaaacagatgacagc
atcaccttggtgtgggagaatacgagagccactgtcgataattacaaggttaaatattca
ccactggcaggaggggagcacaaggaaatcacagtcgaaaggagcaatcaaccaaccaca
aaaattaagattcctgatctacagccaggtactgagtatggttttggagttagtgccatt
aaagactatcgggaaagtgcccctgctaccattaatgtagctacagacttggatagtcca
aaagacttgaaagtgatggagacaacagagaacacaattactctgagatggaaacggcca
ctggcagcaatagaccattactacatcatctatatctcatccactggtgagaagaatgag
gagattgtggcagccgatgcagtctcctacattctgactgggcttgtccctgcaactgag
tacaccattattgttatagcacaacgaggtaaacagaagagcagtgcttccaccaccagt
gcttctacagaatcctttgacaataccaccacacattctccaatctcaggagctgccaag
ccagagaatcttctggtaaaaaacgtaacttccaacagcctcgagatatcatggacagca
ccaagtggactctttgatagttttcttttaataataaaggatattaatggatcgagtgtc
cctttgaagatttccctaccaggtgatcagcataccactgatgtaacagggctggtagct
ggcactgagtacgagattgatctttatggagtattccaaggccacctctcgcaaccattg
aaagatattgcaagaacagaatctgaacttgaaaacttaatggtctcggaagttacctcc
ggcagcttcaaactctcttggacagctgatgagtcctttcaaaactttgttatagatgtt
aaagactctgatgggttattcgaaccattaacatatacagtaccaggtgatcagtattcc
atagacatcccgcatcttcatgctgctactgactatgagatttccatctatggtataagt
catggtcagcaaacaaagccactatacactgaagctcaaacagaagctgagcctgaagtg
gacaacttatcagtttctgatgttacctcaaatagcttcacactctcttggacaacagat
gagaatgtctttgattactttagcattagcattggggattcgagaaaggaaactgcaccc
cgggactacatcgtgtcaggggaactccgaacaactaacatcacggacttacctgatggt
actgagtttgagatttccttggttggcatttcagagggacgatattcgcagccattaaac
accatagcaaccacagcattaggagctcctaaatttctgcagtttacagatgtcaccgac
actacagtgacactctggtgggacattgagagtagctacatcaccagcttcaagattatt
tatgtgccaactgatggaggtccaagtaacactgtgacagtcgatggcggaaagacacaa
actatactgaggaggctgaccccagccactgaatatgaagtcaaaatcattgctgttaga
gggcttgatgagagtgaagcggtttccggcacagtgcgtacagccctggacagtccctca
gaattgagagttgtgaaagtcatggattctgaagccctgctgacatggaaacccacaatt
gctgcagtagatgaatatgtgctcaacgctcatactgagggtgcttcagctcttcaacag
acaaaaagggtttcagggaaccaggtgcagactaccctctcctcgcttttccctggtacc
ttgtacactgtgtggatcagggctgtgaaaggcattatggaaagctctgctgcatctact
acttttacaaccgccattgatccacccagagacctgagagttggagaaattacagcaacc
aatgcccttgtttcttggaaacctccacaagctaagattgaagggtacattatgaccgtg
gaatctgaagatgggagaccacagagagttgagtatttcagagctacagatacctcatac
agcatgagcgaactggttccatcaatgagatacattctgagactccaggcctacacaggg
tcagaaagaagcaatgtgatagagaccagtttcataacagttggctccttgtatccattc
cccaaggattgctcccaaacgttgctgaatggtgaagccatttctggactttacaccatc
ttcttgcgtggaaatcgttctcagccattggaggtgtactgcgacatgaccactgatgga
ggcggttggatggtttttcagagacgccagagtggcagagtagatttcttcagaaactgg
aagaattacacaaatggatttggcaaccctgctgatgagttctggttagggcttgaaaat
cttcacaagattacatcacagggtcattaccaactgcgtgtggatttccgagatgaaggg
gactctgcttatgcagtttatgacaggttccttatctctgatgccaaaagtcgatacaag
ctacatgttggagggtacaatggaacagcaggtgattccctgtcttaccaccaaggtcgg
ccattctccacaagggacagagacaatgatgtggctgtgacaaactgtgctctgtcttac
aagggagcctggtggtacaagaactgccacaaagtaaatctgaatgggcgatatggagct
aaaagccatagccagggtgttaactggtttcattggaagggtcatgagcattcaattgca
tttgttgagatgaaattgagaccacacaacttcagaaacccacaacagagaaagaagaga
gcacagtaa
DBGET
integrated database retrieval system
