Hemiscyllium ocellatum (epaulette shark): 132825841
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Entry
132825841 CDS
T09720
Symbol
rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hoc03000
]
132825841 (rc3h2)
04121 Ubiquitin system [BR:
hoc04121
]
132825841 (rc3h2)
Transcription factors [BR:
hoc03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
132825841 (rc3h2)
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132825841 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
Prok-RING_4
zf-C3HC4_3
zf-CCCH_4
zf-C3HC4
zf-C3HC4_4
zf_CCCH_4
zf-C3HC4_2
zf-CCCH_UNK
FYVE
RING_XB3-XBAT31
Citrate_synt
Vesi_VP2
Motif
Other DBs
NCBI-GeneID:
132825841
NCBI-ProteinID:
XP_060697362
LinkDB
All DBs
Position
21:42235268..42348990
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AA seq
1142 aa
AA seq
DB search
MPVQASQWTEFLSCPICYNEFDENVHKPISLGCGHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDQQTVNLSNLTENKHYEVAKKCVEELALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTTDPANLNRLRSHLELLANI
DPNPDAAPPTWEQLENAMVAVRTVVHGLVDFIQNFSKKGHEAPQPQPNSKYKTSMCRDLR
QQGGCPRGANCTFAHSQEELEKYRMRNKKINSTVRPFPLSQALQNKVGITNIITTSAGNV
VSMTGSTETTVKMVQTPNGIISPESTPQLIPRCADTSAALENAKKIGQNCLSTSGSLSGS
PPENKVGSPPKTILNQVLATPAVVSSHIGSDATSLPSSKSVSRVSVYPSQQPDLYYQDPR
TPVSYELTAYHQPGGYYPPHPGLPSGVSPCLPRYVRPNSMPESPLPPTVPYADHYNAYPP
RDRLASSPYPSATPQQYGSVPAVHSGMYTPVYDSRRMWRPQMYPRDDVVRSNSLPPMDMV
PSAAYHPPPRERYSSLDGYYSMAGQPANEQRSVSIQKDAYSRMQQPGFDDLLRRKPDQWT
HYSTPKPPLVSSALSTVTQPSDPPSPLFSVDFSSEQFSENTSDLCVGTKFEDDNISHYSP
WSCGTISSCISAMESDPKDIMATTSVEVMDLNVKRRLNLFDSQRRAKDEDPIIPFGDGPI
ISKWGAISRSARTGYHNTDPVQATASQGSATKPISITDYSPHVSHADSSNWNSHVLSYGS
NSTNGQYLNRDRLRIIDLPGHRKHSNGGDQLNIELQQREFSEVSADARSDRDIELELSAL
DTDAEPDEGIEDVLDLDIGSQSDLTNDIMSENGHNHKHQGQEQEEQGRRIAEQIAITEEQ
KMIPITSGFNQPTTASVGYVTSPPVTTSFNISNLVLKTAAVKLSEDKDMKPATNGETLVN
GS
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaagcatcacagtggacagaattcctctcctgtcccatctgctacaatgaa
tttgatgagaacgtgcacaaacccatcagcttgggctgtgggcatactgtctgtaaaacc
tgtctgaacaaactacatcgcaaggcatgtccctttgaccagactgccatcaacacagac
atcgatgttcttcctgtgaactttgcacttctgcagttagtcggtgcacaggtcccagac
cagcaaactgtgaacctgagtaacttgactgaaaataaacattatgaggttgcaaagaag
tgtgtggaagagctggcactctacttgaaacctcttagtggaggaaagggtgttgcaagt
ttaaatcagagtgcactgagtcgaccaatgcaacgaaaactggttaccttggttaactgt
cagttggtagaagaggaagggcgtgttcgagcaatgcgagcagcaagatcactgggagaa
aggacagttactgagctcattctgcagcatcagaatccccagcagctatctgccaatttg
tgggcagcagtgagagccagaggttgtcaatttttgggaccagctatgcaggaagaagct
cttaaattggtcttacttgcattggaagatgggtcagcactctctcggaaagtgctggtt
ctttttgttgttcagaggctggaaccacgatttcctcaggcatccaaaactagtattggt
catgtggtacaactcttgtaccgtgcttcatgctttaaggttactaaaagggatgaagac
tcttctctgatgcaactgaaagaagagtttcgtacttatgaagctttgcgcagggagcat
gatgcacagattgttcatattgccatggaggctggacttcgaatttcccctgagcaatgg
tcttctcttttgtatggagatttggcacataaatcacatatgcagtctatcattgataag
ctccaatccccagaatcttttgcaaagagtgtacaggaattgactattgtcctacaacgg
acaacagatccagctaatctgaaccgactccgatcccatcttgaacttctggctaatatt
gatcctaacccagatgcagcacctccaacatgggagcaactagagaatgcaatggtagct
gtaaggactgtagtacacggacttgtggatttcatccagaacttcagtaaaaaaggccat
gaagcaccacaaccacagccaaacagcaaatataaaaccagcatgtgccgagatcttcga
caacaaggaggttgtcctcgtggagctaactgtacctttgcccactcccaagaagagttg
gaaaaatatcggatgcggaataagaagattaattctactgtcaggcccttccctctgtcc
caagctcttcagaacaaagttggaatcactaacataatcacaacatctgcagggaatgta
gtttctatgacaggatccactgaaaccactgtgaaaatggtgcagacgccaaatgggata
attagtccagaaagtactccacaactaataccccgctgtgcagatacctcagctgcttta
gaaaacgctaagaaaattggacaaaactgcctaagtacatctggatcattgtctggttca
ccaccagaaaataaagttggctcccctcccaagaccattctcaaccaggtgctcgctacc
ccagctgtcgtatcatcacatattgggtcagatgcaacttcactaccatcctcaaaatct
gtgtcaagggtatcagtatacccatcccagcaacctgacttgtattatcaggaccccagg
acgccagtttcctatgaactgactgcttatcatcagccaggagggtattatcctccacat
cctggtctaccatctggtgtgtctccttgccttcctcgttatgtacggcccaacagtatg
ccagaatccccactcccacccactgtgccatacgctgaccactacaatgcatatccacct
cgggatcgtctagcctcgtctccttacccatcagcaaccccgcaacagtatggttcagtc
ccagcagtgcattccggaatgtatacaccagtctatgatagcaggcgcatgtggaggccg
cagatgtacccacgggatgatgttgtgcggagtaattctttacctccaatggatatggtg
ccttcagctgcctaccatccaccaccacgagaaagatacagttcgcttgatggatattat
tccatggctgggcagccagcaaatgaacaaagaagtgtcagcattcagaaggatgcatac
agccgaatgcagcaaccaggctttgatgacctgctgagacggaaaccagaccagtggact
cactattccaccccgaaaccacctcttgtctcttctgctttgtccacagtcacccagccc
tctgaccctccatcccccttgttcagtgtagacttcagctctgagcagttctctgagaat
acaagtgatttatgtgtgggcactaaatttgaagatgataacatatcccattattctcca
tggtcctgtgggaccatcagctcttgcattagtgcaatggaatctgatccaaaagacatc
atggcaaccaccagtgttgaagtaatggaccttaatgtgaaacgacggctaaatctgttt
gattctcagagaagggcaaaggatgaagatcccataattccatttggtgacggaccgatc
atctctaagtggggtgcaatttctaggtctgcccgcacaggttatcataatacagaccca
gtccaggctacagcttcccaaggaagtgctacaaagccaattagtataacagactatagt
ccacatgttagccatgcagattctagtaattggaattcccatgtcctttcatatggatcg
aattctactaatggccaatacttaaacagggacagattgcgaataattgacctgcctggt
cataggaaacattctaatggtggagatcagttgaatattgaactgcaacagagggaattt
tcagaagtttctgcagatgcaagatctgatcgagatatagaactggagctttctgcttta
gatactgatgccgaaccagatgagggaatagaggatgtcctggatttggatattggttcc
caaagtgatctgaccaatgatataatgtctgaaaatggtcacaaccataagcaccagggt
caagagcaggaggagcagggccgaagaattgcagagcaaattgctatcacagaggaacag
aagatgataccgataacttctggctttaaccagcccactactgcctctgttggctacgtc
acctccccgcctgtgactacttccttcaacattagtaatttagtcctgaaaacagctgca
gtcaagttgtcagaagataaagacatgaaacctgcaactaatggcgagactctagtcaat
ggaagctga
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integrated database retrieval system
