Hemiscyllium ocellatum (epaulette shark): 132825855
Help
Entry
132825855 CDS
T09720
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132825855 (gapvd1)
Membrane trafficking [BR:
hoc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
132825855 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
EF-hand_14
Motif
Other DBs
NCBI-GeneID:
132825855
NCBI-ProteinID:
XP_060697396
LinkDB
All DBs
Position
21:46044284..46196951
Genome browser
AA seq
1467 aa
AA seq
DB search
MVKPDLHTLAHHLKQERLYVNSEKQLLQRLNTDVLKTAEKLYCSAWIAKQQRINLDRLIL
TSVEASPAECCKHAKILEDTQFVDGYKQLGFQETIYGEFLNRLRENPRLVASCLVAGEKL
NHESTHNVILTVFTALYGNCIMPEDESYLLQVLRYLIEFELKESDNPRRLLRKGACTFSI
LFKLFSEGLYSAKLFLTATLHEPIMLLLVEDEDHLETDPKKLIERFTPAQQEKFFGEKGT
EQFRRKVQEMVESNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVEGLAVG
EVKAMCTDLLLAYFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMTGSEEAD
PRLKNSLSKFDKICVAAFLDVIIGGRTVETPPMSSVNLLEGLSRTVVYMTHNQLVNLVNF
ARHVKSRDLLREEDKMALENLIINLPQPRAGKSNSLELTPSSTPQLSPATTPANKKNRLQ
IAGRNRGRTNEAKEQHFDHESSSQEPLQEIHPEEVLVISLGITSQMSPGMMSENEVLSMQ
LAESGQGEVPADDGKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSEL
GAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFELRDMMGLTDDRDISETVSETWSTDV
LGSDFDPNIDEDRLQDIAGAAAENMLGSLLGLPGSTSVLLDPCTGSTISETTSEAWSVEV
LPSDSEATDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGMSMTSEDIP
NKVEDIRSECSSDFGGKDSVTSPEVEEIVQGVQMTSSLSQTDTLLALFDPLSSDASIMPS
IVRSKVHYARPSHPPPDPPILEGAVGGTDGRLPAFGSPTCCQTEAELLKQRHSFPERLVR
SRSSDIVSSSRRPMSDPSWNAPGSRRTGNEELFAAGAAAVGTSGPTSSPSKDSLGEERKD
SDDEKSDRSKSWWKKRFVSAIPKAPISFRKKDKQEKDKEDGAQERFQAMQGWLILPSIIN
DEPIPRLNVQAQAAEDILDKYRSAIKRASPSEVVVNDEVAETIGDDSVHDSPRDETLQNL
SADDLPDSASQTAQTQDSTFSFRDAKKKLRMALCSADSIAFPLVSHSATRNGPPGGPDQG
ELEDNEIVCFLKVQLAEAINLQDKHLMAQIQETMRCVGRFDSRTCNKLLAAIAEDYRKRA
PYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESREKHILEFIKD
FQNLTAADDKTALVEEFLQSLYGVMAQDVIWQNASEEQLQDAQMAIERSVMNRIFKLAFY
PNQDGDILRDQLFNEHIQRLCKVVSANHRALQIPEVYLKEAPWPSAQSEIRTINAYKTPR
DKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYINNFYAN
RLGGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagcctgatcttcacactctggctcatcacctcaagcaagagcgtctttatgtg
aattctgaaaagcaattacttcagcggttaaatacggatgtattgaaaactgctgaaaag
ctgtattgctcagcgtggattgcaaaacagcagcgaattaacttggaccgtctcatatta
acaagtgtggaagcgtctccagcagaatgttgcaaacatgcaaagattttggaggataca
cagtttgtggatggatacaagcagctgggattccaagagacgatatatggtgaatttttg
aatcgtttgagagaaaacccaagactcgttgcctcgtgcttggtggctggggagaagctt
aatcatgagagcacccacaatgtaatccttacagtatttactgccctttatggtaactgc
attatgccggaagatgagagctatcttctgcaagtgttgcgctacctaattgagtttgaa
ttgaaagagagtgataacccaaggcgactgcttcgaaaaggtgcttgtactttcagcatt
ttgttcaagcttttttcggagggtctgtactctgcaaagctctttcttactgcaacttta
catgagccaattatgctgctgcttgtagaagatgaagatcacttggaaactgaccccaaa
aaacttattgaaaggtttactccagcacagcaagaaaagttctttggcgagaagggcaca
gagcagttcagaaggaaagtgcaggagatggtagaaagcaatgaagcaaagctggtagct
ttggtcaacaaatttattggctatcttaaacaaaacacttactgttttccacatagttta
cgttggattgtatcgcaaatgtataaaaccttgtcttgtgtggaagggttggctgttggg
gaggtgaaagccatgtgcacggatttgttgcttgcttatttcatttgcccagcgattgtt
aatccagaacaatatgggataatctctgatgctccaattaacgaagtggcaagatttaac
ttgatgcaggttggccaactcttgcagcagttggcaatgacgggcagtgaggaagcagat
ccacggttgaagaatagtctctccaaatttgacaaaatttgtgttgcggccttcttggat
gttatcattggcggtcgtacagtggagactcctcctatgtcctcagtgaatttgctggag
ggactaagtaggactgttgtctacatgacacacaatcaacttgtaaatttggtaaatttt
gcacggcatgtaaagtcaagggacctgctaagagaagaggacaagatggctctggagaat
cttatcattaatcttcctcaacccagagcagggaagagcaatagccttgagctgactccc
tccagcacaccccagctatcccctgcaactactccagccaacaaaaaaaatagacttcaa
atagctggaaggaataggggccggacaaatgaagcaaaagagcaacactttgaccatgaa
agttcaagtcaggagcctttgcaggagatccatcctgaagaagtattggttatttcactg
ggcattacctctcagatgtcacctggcatgatgtcagaaaatgaggtgttgagcatgcag
cttgctgaaagtgggcaaggagaagtacctgcagacgatggaaaactgcatggcaaacca
gataaaactctgcgtttttccctctgcagtgataatctggagggaatatcagaaggacct
tcaaaccgctcaaattctgtatcctcactcgacctggaaggagaatcagtctctgaactt
ggagcaggaccttctggaagtaatggtgttgaagctttacagcttttggaacatgaacaa
gccacaacacaagacaacctcgatgacaaactgcgtaaatttgaacttcgagacatgatg
gggctgacagatgacagggacatttcagaaactgtgagtgaaacctggagcactgatgtc
ttgggaagtgattttgatccaaacattgatgaagatagactgcaagatattgcaggtgca
gcagcagagaatatgctaggtagtttgcttggtttaccaggttcaacttcagtgctactc
gatccctgcacagggtcaacgatttctgagacaacaagtgaggcttggagtgtggaagtt
ctgccaagtgactcagaagctacagatttgaaacaagaggagcggttgcaggagctggaa
agttgctcaggattgggtagcacatctgacgatacagatgtgagggaagtgagttcacgg
cccagtacacctggtctcagtgttgtctcaggcatgagtatgacttcagaagacataccc
aacaaagtcgaggatatccgatcagaatgcagctccgattttggagggaaagattctgtt
acaagccctgaagtggaggaaattgttcagggtgtacagatgacttcttcactctcccag
acagacacattgctcgcattgtttgaccctctgtcttctgatgcttccatcatgccatca
atagtcaggtctaaagtacactatgcaagaccgtcacacccaccacctgatcctcccata
ctggaaggtgctgtaggaggcaccgatggccgattgccagcatttgggtctcctacttgt
tgccaaactgaagctgaattgctgaaacagaggcactcctttccagaaaggctagtacgc
agcagaagttctgatattgtttcttcttctcgccgaccaatgagtgatcctagttggaat
gcaccaggcagcagaagaacagggaatgaagaactgtttgcagctggggcagcagctgta
ggaacctcggggccaacttcatctccaagcaaagattccctcggtgaggaaagaaaggac
agtgatgatgagaagtcagatcgtagtaaatcctggtggaagaaacgatttgtgtctgct
attccgaaagctcctatttccttcaggaagaaagataaacaagaaaaagacaaagaagat
ggtgcacaggaaaggtttcaggccatgcaaggttggctgatcctaccttccataatcaat
gatgagccaattcccaggctgaacgtacaggctcaggctgcagaggatatcctggataaa
tatagaagtgctattaaacgagccagccccagtgaagtagttgtcaatgatgaggttgca
gagacaattggagatgatagtgtccatgattcaccacgtgatgaaacgcttcaaaacctt
tcagcagatgatctgccagattccgctagtcagactgcccagactcaagattccacgttc
tcctttcgagatgcaaagaagaaattgcgaatggctctgtgttctgctgactcaattgca
ttccccctagtgagccattcagcaaccagaaatggccctccaggaggacctgatcaagga
gaattagaagacaatgagattgtctgttttctcaaagttcagttagccgaagccatcaac
ttgcaggataagcacctgatggcacagattcaggaaaccatgcgttgtgttggtagattt
gacagtagaacctgcaacaagttactagctgccattgctgaggattacagaaaacgagct
ccatatattgcttacttgacacggtgccgtcaagggctccagactactcaagcccacctt
gaaagactcttacaaagagtgctcagagacaaagaggttgcgaacagatacttcactaca
gtctgtgtgagactattgcttgaaagcagagaaaagcatattctggaatttattaaagat
tttcagaatctcaccgcagcagatgacaaaactgccttagtagaagaattcttgcagtca
ttgtatggagttatggcgcaagatgttatctggcagaatgccagtgaagaacagctccag
gatgcacaaatggcaattgagcgtagcgttatgaaccgcattttcaaacttgccttctat
cccaatcaggatggtgatattttacgtgaccagcttttcaatgaacacattcagcgtctg
tgtaaagttgtcagtgcaaatcaccgagcacttcaaattccagaggtgtatttaaaagaa
gcaccatggccatctgcacagtcggagattcgaacaatcaatgcatacaagaccccaaga
gataaggttcagtgtatcctgcgaatgtgctccaccataatgaatctgttaagcctggcc
aatgaggactcagtccctggggctgatgactttgttcctgttcttgtgtttgtccttatc
aaggctaacccaccctgcctgctgtccactgttcagtacatcaataatttctatgccaac
cggcttggtggagaagaatcctattggtggatgcaattcacagcagcagttgaattcatt
aaaaccattgatgatcgcaagtga
DBGET
integrated database retrieval system
