Hemiscyllium ocellatum (epaulette shark): 132825883
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Entry
132825883 CDS
T09720
Symbol
nup188
Name
(RefSeq) nucleoporin NUP188 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132825883 (nup188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132825883 (nup188)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132825883 (nup188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
132825883
NCBI-ProteinID:
XP_060697463
LinkDB
All DBs
Position
21:complement(53576527..53676566)
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AA seq
1752 aa
AA seq
DB search
MAVAVARTYVRSSRELWTILLGRSALRENDQIEAELDRHCERLLAGLSYYKPPSISSGEK
LKADKEVVVPLKELGLRISKFLSLDEQQSVQLLQSYLQEDYRGTQSSIKVVLQDERQSQA
LQLKIAEYYYEERLYTLRCVLYLLTYFQDERHPYRAEYSKCVDKLEKELVVNYRKQFEEL
FRTEAPTWETHGNLMTERQVSRWFVQCLKEQALILEIIFLYYAYFEMGPEDLLAFARIFK
EQGFGTRQTNRHLVDESMDGMVDRIGYFSALILVEGMDIDFLHKCALEERVEQHQFANAR
EICQEMDKLLLTLGDIPHHAQVLLSWALLRHTLNLDESTPVIRRLGSTAIQQNVFQLMTQ
MLKALGSGGNNCTASTARMCIYGLLSFVLTSFEEETLGNQQHLIDVACEVFTAPNLAELF
WDTEPTAGIAILLDNNCGMFPQSMAPLLQLLSALISDKSTAKKVYSFLDKMTCYTEPYKH
KPHDVLSHEDGTRWRRQMPKLLYPLGSGQANIRMPQGTYGHVIPAGQGFLVRWDFSYSSW
TVFTCEIEMLLHVVSTADVLLHCRKVKPIIDLVHKIISTDWSITDYLLPITSRLYMLIQR
LSSVLNPPTDVIASCVNTLTVLATRMPAKVWADLQHTGFLPYSVTQVTGIAQSLRAEGMQ
AGSYGNLLLSIERPQGEYSVTMAFLRLVTTLVKGQLGSTQSRGLLPCVVFVLKELLPTYH
KWRYNVYGVREEIGCLIFELIYTILHLNPAEESQGSNSLSLQSLCTHCLANTEAGQAIIN
IMAVGVDTIDAVMAVQPNSCGSEGSGQTLIQTIKLAFSITNNVIKLKPSSEVVSPLEQAL
TQHGTHGNNLIAVLAKYIYHRHDPALPRLAIQLLKRLAMVAPMSVYACLGSDAAAIRDAF
LNRLQSKTEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDDAVGSKFNDVYSQEFILG
EWSCLQVVLEFIDSKQQGKYWCPPLIHRAAIAFLHALWQDRRDSAMTVLRAKDQFWENLT
SVLFGELPAPCNITEKSVLETCAFTLKIICLEIYYVVRGSLDQSLKRTLKMFFEKKRYEY
WSEYIKSLVIHMMETETEGAAPFLEFHMIISAWRMVLVLATNYVEVMHLCDNSLRLQLLQ
DVLEGTKVLLLVPSSASCLRMGSMLATLLLILLKQWKSIIVQVSKILDPLDQILESLSQS
NQYFMEKTKAKIFSAIITTLQIKRLRVSDISQYSQMLLTVCETIHNEAIVLFDQTHHALT
TGDAGLSDDKDCMETDCAPRLHHKDQKDGVCVLALHLSKELYEMDESGNHLFLITRKVPF
LPAMLSTLELSLRVKQNLHFAEASLHLLLVLSRTQQGAAIVAGAGVLPSICLPLLSVYQL
STNGTAQTLGSSRKSLDAPSWPGVYRLTMSLMERLLKSLRYNFLSEALDFVGVHQERILQ
CLDAVRKVQSLACLDEVDHTVGFILQLSNFIKEWRFHLPQLLRDVQVNLCYLCQTCTFLL
HSPKVLQHYLQVKNGDTIPSAILPRQPKSIQTPTKQQNTEKEEIEQRALLKVQSSLLRIL
SKTLAAVRHFTPDLSQILLDQSLDLAEYDMLFVLSFTTPAFDSDVAPSFGTLLATVNVVL
NMQGEIDKKKEPVSLNVGPLTSTEEAKSLKSLLMFTMENCFYVLISQAVRYLKDPSVHSR
DKQRMKQELSSELSTVLSSISRYSRRGTPCSPAAALLMSPASKSTCSVSKLSPENQEPLI
QLVQAFVRQIQR
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggctgtggcgcggacttacgtgaggagcagtcgagagctgtggacaatttta
ctggggaggtcagcactaagagaaaatgatcaaattgaagctgagttggatcgacattgt
gagcggttactagctggcctgtcttattacaaaccccctagtatatcctctggggagaag
ctaaaagctgataaagaagtggtagtacctctgaaggaacttgggctacggatcagcaaa
ttcctgagtttggatgaacaacaaagtgttcaactattgcagtcgtatctacaagaggat
tacagaggcacacagagctcaataaaggtagtattgcaggatgagaggcagagccaggcc
ctacagctgaagattgcagaatactattatgaagaaagattgtacacgctgcgctgtgtt
ctgtacctacttacatattttcaggatgaacgacacccttacagagcagagtattcaaaa
tgtgtggataagctggagaaggaactggtcgtgaattatcggaaacagtttgaagaattg
ttcagaactgaagctccaacttgggaaacacatgggaatcttatgacagagcgccaagtg
tctcgatggtttgtacagtgtctaaaggagcaggcactaattttggagattatcttccta
tattatgcctattttgagatgggaccagaagatctcctggcttttgcacgaatatttaaa
gagcaaggttttggaacaaggcaaaccaacaggcatcttgtggatgaaagcatggatgga
atggttgatcgtattgggtatttcagcgcattgatcctggtggaaggaatggatatagat
ttcctacataaatgcgctctcgaggagcgagtagaacagcatcagtttgctaatgctcgg
gaaatttgccaggagatggacaagttgctgctgacattaggggacataccacatcatgca
caggtgctgctgtcttgggctttgttgcgccatacgctgaacctggatgaatcaactcct
gtgatcaggcgcttgggaagcactgctattcagcagaacgtgttccagttaatgacacag
atgcttaaggcacttggcagcgggggaaacaattgtacagccagtactgctcggatgtgt
atctatggactgctgtcatttgtcttaacgtcgtttgaagaagaaactttgggaaatcag
cagcacttgattgatgttgcctgtgaggtcttcactgccccaaatctggcagaacttttt
tgggatactgagccaacagcaggtattgctattttattggacaacaattgtggaatgttc
ccgcagtctatggcaccattgttacaactgctatctgcactgatatccgataaatccact
gctaaaaaggtttacagttttttggataaaatgacatgttacacagagccatataagcat
aaaccacatgatgtactttcccacgaggatggaaccaggtggaggaggcaaatgccaaag
ctgctttatccgcttggatctggtcaggctaatatacgcatgccgcagggtacatatgga
catgtaatacctgcaggccagggttttctggtacgttgggatttctcgtatagctcctgg
acagtgttcacttgtgagattgagatgctgttacatgtggtttcaacagcagatgttctt
cttcactgccggaaggtcaaaccgattattgatttagtacacaaaatcatcagcacggat
tggtctattaccgattatctgctgccaatcacttctcgtctgtacatgttaatccaaagg
cttagttctgtgctaaatcctccaacagatgtgattgcttcttgtgtaaataccctaact
gttctggccactcggatgccagccaaggtttgggcagatctacaacatacaggcttctta
ccgtattctgttacacaagtcactgggattgctcaatccctcagggctgaaggaatgcaa
gctggtagttatggtaacctactgctgagcattgagagaccgcagggcgagtacagtgtc
acaatggcctttctccgactggttacaacacttgtcaaggggcagctggggagtactcag
agtcgaggtcttctaccttgtgtggtctttgttttaaaagaattactgcccacctaccat
aaatggcgctacaatgtctatggcgtacgggaggaaattggttgcctaatttttgaactt
atttataccatcctgcatctgaatccagcagaggaatcacaaggcagtaactcactcagt
cttcagtctttgtgcacccattgtttggcaaacacagaagcagggcaggccatcataaat
attatggctgttggtgtggataccattgatgcagtaatggctgtgcagcctaatagctgt
ggatctgaaggatccggccaaacactcattcagaccatcaagctagcgttttctataact
aacaatgtcatcaaactgaaaccatcatcagaagtagtttcgccattggaacaggcccta
acacaacatggtacccatggtaataacttaatagcagttttggcaaagtatatataccac
aggcatgatcctgcattgccacgccttgctatccagctcctaaagagacttgcaatggtg
gccccgatgtccgtgtatgcctgccttggaagtgatgctgcagcaatacgtgatgcgttt
cttaatagactgcagagcaagacagaggacatgcggattaaggtgatgatcctggagttt
ttaacagttgctgtggagacgcagcctggtttgattgagctcttcctcaacttagaagtg
aaagatgatgctgttggatcaaagttcaatgatgtatattcacaggagtttattctggga
gaatggagctgtctccaggtggtattggaattcatagactccaagcaacaaggaaaatat
tggtgtcctcctctcatccatcgtgctgccattgcttttttgcatgcactgtggcaggat
cgcagggatagtgcaatgaccgttttacgagccaaagatcagttctgggaaaatttgaca
tctgtgctttttggagagctgccagcaccctgtaacattacagagaagagtgtgctggaa
acttgtgccttcaccctgaagatcatctgcctggaaatttactatgttgtcaggggttct
ctggaccagtccttaaagcgcacactgaagatgttctttgagaagaagcggtatgaatat
tggtccgaatacatcaaatcccttgttattcatatgatggagacagaaactgagggggct
gctccatttctagagttccatatgataatctctgcatggagaatggttcttgtactggct
accaattacgtcgaggtaatgcatctgtgtgataattctctacggttgcagttattgcaa
gatgttctagagggaaccaaagttttgctgttggtgccttcatctgcttcatgtttgcga
atggggtctatgttggcaacactcctcctaatcttgttgaaacaatggaaaagcatcatt
gttcaagtgtctaaaattctggacccactggaccaaattctagagagtctgtcacagagt
aaccagtactttatggagaagaccaaagcaaaaatattttcggctatcataactactctt
cagatcaaacggttgcgagtttctgacatctcccagtattcccaaatgctcctgactgta
tgtgagaccatacataatgaggcaattgttctgtttgaccaaacacatcatgcactgaca
acaggagacgctggtttgtctgatgataaggattgtatggagacagattgtgcaccacgg
ctacaccacaaggaccagaaagatggggtatgtgtgctggctctgcatttgtccaaagaa
ctttatgaaatggatgaaagtggcaaccatttatttttgattactcggaaagttccattc
cttcctgccatgcttagtaccctggaacttagccttcgagtcaaacaaaatctacatttt
gcagaggcatctctgcacttgcttttagtattatccagaactcagcagggagcggctata
gtggcaggagctggtgtcctaccaagcatttgtctgcccctcctaagcgtttaccagctt
agtacaaatggaactgcacagactttgggatcctcccgcaagtctctggatgccccctcc
tggccaggtgtttatcggctcaccatgtcactcatggaaagacttttaaaatcactccgc
tacaacttcctttcagaagcattagattttgttggggttcatcaagagcggatattgcag
tgtttggatgcagtccggaaggtgcagagcttggcttgcctcgatgaagttgatcacacg
gttggattcattcttcagctctccaacttcatcaaagagtggcgttttcacctgccacag
ctccttagagatgtacaggtgaacctatgttacctatgtcagacatgcacttttctgctt
catagtccaaaggtgcttcagcattatttgcaggtgaagaatggtgacactataccatct
gcaattctccctcgacaaccaaaatccattcagactccaacgaaacaacaaaatacagaa
aaagaggaaatagagcagcgtgcactactgaaagtccagtctagtctgcttaggattctg
agtaagacattagcagctgttcgacactttaccccagatctctcccagatactgctggac
cagtccctggatctggctgaatatgatatgctttttgtcctgagctttacgactccggca
tttgactctgatgttgctccgtcatttggtactctactagcaactgtgaacgttgtcttg
aacatgcagggagagatcgataagaagaaggagcccgtatctttgaatgtgggaccactg
acttcaactgaagaagcaaagtcgttaaagtcccttctgatgttcacaatggaaaactgt
ttttatgtgctgatttcacaagcagtccgttatctgaaggatccatctgttcactcgcgc
gacaagcagaggatgaagcaagaactaagttcagaactgagtacagttttgtccagtatt
tcccgctattcacgtcgtggcacaccatgttcccctgctgcggccctactgatgtctcca
gcgagcaaatccacctgctccgtatccaagttgagtcctgagaatcaggaaccgttaatc
caactcgtccaggcctttgttcgacagatccagagatag
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integrated database retrieval system
