Hemiscyllium ocellatum (epaulette shark): 132825932
Help
Entry
132825932 CDS
T09720
Name
(RefSeq) laminin subunit gamma-3-like
KO
K06247
laminin, gamma 3
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04510
Focal adhesion
hoc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132825932
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132825932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
132825932
NCBI-ProteinID:
XP_060697565
LinkDB
All DBs
Position
21:complement(61739785..61852154)
Genome browser
AA seq
1571 aa
AA seq
DB search
MAPVLVVLLLSACSAQAAMDSCYEPATGTAQRCMPEFCNAAFGRTVLASHVCGSPGPEEF
CLQTGVTGVTKSCHLCDAHSSHNASLLNDFHSEEEPTWWQSPSMLHGVQFPNSVNLTLHL
GKSFEITYIRLKFHTSRPESFAIYKRTHEDAPWTPYQYYSASCQQTYGQSTGTFLRAGDE
ERVPFCTDEFSDISPLTGGNVAFSTLEGRPSAYSFDSSPVLQDWVTATDLLISLNRLNTF
GDDIFRDHRVLRSYYYAISDLSIGGRCKCNGHASECVTNEQGRLVCDCQHNTSGVDCERC
QPFYHDRPWARATAEAANECLPCNCSGKSEQCIFNMELYRRTGHGGQCLNCRDYTAGSHC
ETCKENFHRSTADEMCQPCNCSVVGSLSLQCDHDGDCVCKATITGKKCDQCQKGYHSLSE
GGCRKCGCHPEGSIGDCDPTNGECTCKRNVEGALCHRCKSGTFNLQPHNSDGCRHCFCYS
HSAACTSASHFAVHHIVSSFQQDPDGWRRQSLDGEESSVSWEKGRISLIPEDGEWEYFVA
PAKFLGNQLLSYGQNLSLLLHVESEDLPSFTIVLEGSGIQVSASVSPTVPNETLPWEWAV
NVTLHEVQAGIQRETVSSFQFQQLLSNLTALKLGSNRSIPIHLMDVALVTAQAGLSPRAT
WVEECVCPEGYIGQFCEACAPGYKREILFGGPLSPCVACTCNQHGSCEPESGICQCVHNT
VGPSCEYCASGYYGNPFRGRYNDCKPCPCPAQSNCTVLEERNEVVCTDCPDGQTGMRCET
CDDGFYGDPLGLWQGYVRPCSRCQCNGNTDPNAVGNCNPVTGQCLKCLFHTVGHYCDTCE
DGFYGNALAPSPAGKCQPCACDPIGSTNGLQTCDPGRGQCECLPHVIGRDCSRCEPGYYD
LRPTVGCLSCACHPLGSRNSFCQGQTGQCNCRPGVGGRACDRCQRGYFDLSEWGCQACDC
SPLGSVGMQCLGDGSCLCKTGFVGRKCEQCQENYYYEASTFHCQLCPTCYNLVQLEVEQL
KHRIRELGEALTRFSHDPEQLYQLYTNHLQSSLQDMEAQAVQGSGAHSVELVGEVEMTLA
RIGQELSNISRSLDCEGSELKRCIVVAASKRIVQNTLTQLQATRDILNTKMPWLIHRSPS
EEGRNWTGLVKESRSLAESQVRTAMEVESIVRDALATSNQSYILLTGIIQDDSIAADIME
AEQSLQSLQSQMEELAEEADKALKEAKRLYVSTHPTRGANLTLPPSLTEPQPEGWNNFTA
EIENLESALQVKDQQIEKLLLEVEPRVKAFQMGMETKEMYDELLSRVKSSRATARASVQK
VKQIKEEGISLLKILEDNKTPAGKLRGKGSLRKMGAIKGKVMPEAKRKTALARRILRVAG
SSSTISNTTASRAWHINQGIAKEAQKLRRRAQDQATQSGSLRTRLDITQGQLATQEEQAA
AFKVKLQEDGTTAAKVLHETLAMGKEVKKARQSLDRDLKQLTELLKTVESLQVDQVTEEM
LNTTKAEMGALRWVIDQTLDQKLRELEAASDLQILKMKSIEKDMEDIEAEKLSLEDIVEN
LPHGCYNRVGY
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggtcctggtggtgctgctcctgtctgcctgcagtgcccaggctgcgatggat
tcctgctacgagccggccacagggacagcgcagaggtgtatgccggagttctgcaatgct
gctttcggcaggacggtcctggccagccatgtgtgcggctctccggggccggaggagttc
tgcctgcagaccggggtgacgggggtcaccaaatcctgccacctctgtgatgcccacagc
agccacaatgccagcctcctgaatgacttccacagtgaagaggagcccacttggtggcag
agtccgtctatgctgcacggagtccagttccccaactctgtcaacctgaccctgcatctg
ggcaagtcgtttgagattacctacatccggctgaagtttcacaccagcaggcctgagagc
tttgctatctacaagaggacccatgaggatgccccctggactccctaccagtattacagc
gcctcctgtcagcagacatacggccaatccaccgggaccttcctgagggcaggggatgag
gagcgggtcccgttctgcactgacgagttcagcgatatctcccccctgacaggggggaac
gtggctttctccaccctggaggggaggcccagtgcgtacagctttgactccagccctgtg
ctgcaggactgggtaacagccaccgatctgctcatttccctgaaccgactgaacaccttt
ggagacgacatcttccgggatcaccgggtgctccgttcctattattacgccatctccgac
ttatcaatcggtggcaggtgtaaatgtaatggccatgccagtgagtgtgtgaccaacgag
cagggcaggctggtgtgtgactgtcagcacaacacatcgggcgtagactgtgagaggtgc
caacccttctaccacgaccggccctgggcacgggcaactgctgaggcagccaacgaatgt
ctcccctgtaactgcagtgggaaatcggagcagtgcatcttcaacatggaactgtaccgc
cggactggccatggcgggcagtgcctgaactgcagggattacacagcaggatcccactgc
gagacgtgcaaggagaacttccacaggagtactgctgatgagatgtgccagccgtgtaac
tgcagcgttgtggggtcactgagtttacaatgtgaccacgatggagattgtgtctgtaaa
gcaactatcacggggaagaaatgtgaccagtgccaaaagggctatcactctctgtcggag
ggaggttgcagaaagtgtgggtgtcatcctgaaggcagtattggtgattgtgatccgacc
aacggagagtgtacctgcaagcggaatgtagagggagccctgtgccacagatgcaagtca
ggaacgttcaatctacaacctcacaactctgacggctgcaggcactgcttctgttacagt
cactccgcagcctgtacatcagcctcccactttgctgttcatcacatcgtctccagcttt
caacaagacccagatggttggcggagacagagcctggatggagaggagtcctcagtctcc
tgggagaagggtcggattagtctgattccagaagatggggaatgggaatattttgttgca
ccggccaagtttctggggaaccagctgctcagctacggccagaacctctctctgcttctg
cacgtagaaagtgaggatcttccctccttcaccatagttctggaaggttccggaatccag
gtctctgcttcagtttccccaacggtgccgaacgagacattgccctgggaatgggcagtt
aacgtcacactgcacgaggtacaggctggcatccaacgtgaaacggtctccagtttccag
tttcagcagctgctctccaacctcactgctctgaaactgggtagcaacaggagcattccg
atccacctaatggatgttgccctggtaacagcacaggccggcctatcgccccgcgcaacc
tgggtggaggagtgtgtgtgtcccgaaggctacatcggacagttctgtgaggcgtgtgcc
ccgggttacaagcgggagatactatttggagggccactcagcccctgtgtggcctgtacc
tgtaaccaacatggaagctgtgagccggaatcaggtatttgccagtgtgtacacaacact
gtcggaccgtcctgtgagtactgtgcgagtggttactatggcaaccccttccgcggcaga
tacaacgattgtaagccgtgcccatgcccggctcagtctaactgcaccgtgttggaagag
agaaatgaggtggtctgtacggattgtccagatggacagacaggcatgcgttgtgaaacg
tgtgacgatggtttctatggtgacccactgggcctttggcaggggtatgtccgcccatgc
agccggtgtcagtgtaacgggaataccgatccgaacgccgtggggaactgcaatccggta
acaggacagtgtctgaaatgcttgttccacacagtgggccattactgcgatacgtgtgag
gacggattctatggcaatgctctggcccccagcccagctggaaagtgccaaccatgcgcc
tgtgatcccattggctcaaccaatgggcttcagacctgtgaccctgggcgtggccagtgt
gagtgtctgccccacgtgattggccgagattgcagccgatgcgagcctggttactatgac
ttgcgacccacagtggggtgcctcagctgtgcctgccaccccctgggatcacggaacagt
ttctgccagggacagactgggcagtgtaactgccggcctggtgttggaggccgggcatgt
gatcgatgccaacggggttactttgacctctcagagtggggctgtcaagcgtgtgactgc
tctcccctgggatccgtggggatgcagtgcctgggggacggctcctgtctgtgtaagact
ggcttcgtgggaaggaagtgtgaacagtgccaggagaattattactacgaggcttcgacc
tttcactgccagctgtgcccgacctgctacaacctggttcaacttgaggtggagcagctg
aaacaccggatccgggagctgggtgaggccctgaccaggttcagccatgaccctgagcag
ctgtaccagctctacaccaatcacctccagtcatccctacaggacatggaggcacaggcc
gtgcaggggtctggggctcactctgtggagctcgtgggtgaggtcgagatgactctggcc
cgaattggacaggagctgagtaacatcagtcgcagtctggactgtgagggcagtgagctg
aaacgctgcattgtggtagctgccagcaagaggattgtccagaataccctgacccagctc
caggcaacgagagacatcctcaacaccaagatgccgtggttgattcatcgctcccccagt
gaggaagggcggaactggacaggactggttaaggagtctcgttctctcgcagaaagccag
gtcagaaccgcgatggaggtcgagtcaatagtgagagatgccttggctacctcgaaccaa
agctacatcctcctgacgggcatcatccaggacgactccatagccgctgacatcatggag
gccgagcagagcctccagtccctgcagagtcagatggaggagctggccgaggaagcggac
aaggcgctgaaggaggccaagaggttgtacgtgtctacccatccaacccggggggcaaac
ctcactctgcctccaagcctcaccgagccccagcctgagggctggaacaatttcacagcc
gaaattgagaatttggaaagtgctcttcaggtcaaagaccagcaaattgagaagctgctt
ctggaggtggaaccccgagttaaggccttccagatgggaatggaaaccaaggagatgtac
gacgagcttctgagtcgtgttaaatcttccagggccactgcgagagcatcagttcagaaa
gtcaaacagatcaaagaggagggaatctctctgctgaaaatcttggaagacaataagaca
ccagctggcaagctccgaggtaaagggagtttgcggaagatgggtgcgatcaaggggaag
gtgatgccagaggccaagaggaagaccgcactcgcccggagaatattgcgagttgctggc
tccagttctaccatcagtaataccaccgccagccgggcttggcacatcaaccaaggcatc
gcaaaggaggcccaaaagctcaggagacgagcccaggaccaggccacgcaatcaggctca
ctccgcactcggctggacatcacgcagggtcagctggccacccaggaggagcaggccgca
gccttcaaggtgaaacttcaggaggacggcacaacagcagccaaggtccttcatgaaaca
ctggccatgggcaaggaggtgaagaaagccagacagtccctcgatcgtgacctgaagcaa
ttaactgagttactgaagacagtcgagagccttcaggttgaccaggtgacggaggaaatg
ctgaatacaaccaaggccgagatgggagccctgaggtgggtgatcgatcagaccctggac
cagaagctgcgggagctggaggctgcctccgacttacagatcctgaagatgaaatcaatc
gaaaaggacatggaggacattgaggcagagaagcttagcctggaggacatcgttgagaac
ctgcctcatggctgttataaccgagtgggatactag
DBGET
integrated database retrieval system
