Hemiscyllium ocellatum (epaulette shark): 132826195
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Entry
132826195 CDS
T09720
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132826195 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hoc04121
]
132826195 (herc4)
Enzymes [BR:
hoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132826195 (herc4)
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
HECT type E3
132826195 (herc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Hikeshi-like_C
T7-like_gp12
Motif
Other DBs
NCBI-GeneID:
132826195
NCBI-ProteinID:
XP_060697829
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All DBs
Position
22:4131191..4229767
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AA seq
1049 aa
AA seq
DB search
MLCWGNTSYGQLGLGGIDEEVVLEPRICEFFQSKKIRDVGCGRRHTVFVLDDGTVYSCGC
NDLGQLGHEKARKRPEQVGALDAQNITAISCGEMHTLALNDSGQVFAWGLAKDGQLGLAV
TEESVRVPRNIKSLVEVQITQVACGYHHSLALSKGSQVFSWGQNKNGQLGLGQDIGNQPS
PQPVRSLNGVPFVQIAAGGAHSFAVSLSGAVFGWGCNKFGQLGLNDEHDRYVPALLKSLR
TQKIVYVCCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGYVITQIA
CGRQHTLAFVTSSGKVYSFGLGGNGQLGTGSTNNRKSPCAVKGPWVPHGGQFLPIINAKN
NYYVKRIFSGGDQSFAHCYSLQNSMPPDDFRLPNPSKGILTLNDAIIQKWINYPPGRIPS
EVTNEIDTVFSSAGCLNGSFLALSNDDHYKTSSKFSGIDMNAARLLFHRLVHSDHPRILQ
QIAASMEKNLIPRLSHSPPDVEALRIYVTLPECPPMNDVNNYVTLAIPFGMAIVKLEKVP
LKVLENWWATFEPAFFQKIVQLYKDVVVFLLRLTKVGMANSERRTWNNFLKTALEVLAIL
HRVNEKSGQIIQYDKFYIHEVQDLIDIRSDYVNWIQHQVYGVMPDMPITICTYPFVFDAQ
AKTTLLQTDAILQMQLAVDQAHRQNFSSFFMPVVDTVNPCLVLIVRREHIVEDTVEVLRK
SKNVDFKKPLKVIFVGEEAVDAGGVRKEFFLLIMRDLLDPKYGMFRYYEESRLIWFSFQT
FEEIDLFHLIGVVCGLAIYNFTIVDLHFPLALYKKLLNQKPTLDDLKELMPIVGRSMQQL
LDYPEEAVEDIFSLNFTIAVEKFDVTEVKELVPDGANIPVTKYNRQEFVDAYVDYVFNKS
IAPLFDGFYEGFHKVCGGKVLQLFQPNELQAMVIGNANYDWKEWEKNTEYKGEYWAEHPT
IKLFWEVFHELPLEKKKRFLLFLTGSDRIPIIGMKSLKFIIQPTGGGDEYLPVAHTCFNL
LDLPKYTDKETLRTKLVKAIDHYEGFSLV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgctatgttggggcaatacatcatatggacagcttggacttggtggtatcgatgaggag
gttgttttagaaccaagaatctgtgagtttttccaaagcaaaaagattcgtgatgtggga
tgtggccgcagacatacagtttttgttcttgatgatgggactgtttacagctgtggatgt
aatgatctgggccagctgggacatgagaaagcaagaaagagaccagagcaagttggggct
ctggatgctcagaatatcactgccatttcatgtggagagatgcatactcttgcactaaat
gatagtggtcaagtgtttgcttggggtcttgccaaagatggtcagttgggtttggctgtc
acagaagaaagtgtccgagttcccaggaatataaaatccttagtagaagtacagataaca
caggtagcctgtggttatcatcattcccttgcattgtcaaaaggaagtcaagttttctca
tggggacagaataagaatgggcaactgggattaggtcaagatattggaaaccagccatca
ccgcaacctgttagatctttaaatggtgttccttttgttcagattgcagcaggtggagcg
cacagttttgcagtctcactctcaggggctgtgtttggttggggatgcaacaaatttggc
cagcttggcttgaatgatgagcatgacagatatgttcctgctctgttgaaatctcttcga
acacagaagattgtctatgtttgctgtggtgaagatcatactgctgctcttacaaaggaa
ggtggagtatttacatttggtgctggaggctatggtcaattggggcataacagcacaaat
catgaaataaatccaagaaaagtctttgaattgatgggatatgtaataacacagattgca
tgtggaaggcagcacacactagcatttgttacctcatctggaaaggtgtattcatttggt
cttggaggaaatggccaactgggaactgggtctacaaataacagaaaaagcccctgtgcg
gtgaaaggaccatgggttcctcatggtggacaatttttaccaattatcaatgccaaaaac
aattattatgttaaaagaattttctcgggaggtgatcaaagtttcgcacattgttacagt
ttgcagaattccatgccaccagatgacttcagattacccaatccatcaaaaggtatactc
acattaaatgatgcaattatccagaagtggataaattatcctcctggaaggattccttca
gaggtaacaaatgaaatcgatactgtgttctcatcagcaggctgcttaaatggaagcttt
cttgctttgagtaatgatgatcattataaaaccagttccaaattctctgggattgatatg
aatgcagctagactattatttcacagactcgtacattctgaccatcctcggattttgcag
cagatagcggctagtatggaaaaaaatttgatcccaagactttctcattccccacctgat
gtagaggccttgagaatctatgttactcttccagagtgcccacctatgaatgacgttaac
aactacgttactttagccattccatttggaatggctatagtgaagcttgaaaaagtgcca
ctgaaagtacttgaaaattggtgggccacatttgaacctgcgttctttcagaagattgtg
caactttataaggatgttgtagtatttcttctgagactaactaaggttggaatggctaac
tctgaaagaaggacatggaataattttctgaaaaccgccctggaagtattggcaattctc
catagggtaaatgagaaatcaggacagatcattcagtatgataaattctatatccatgaa
gtgcaagatctcatagacatcaggagtgattatgtaaactggattcaacatcaagtatac
ggagttatgccagacatgccaattacaatttgtacttatccatttgtatttgatgctcaa
gcaaaaacaacactcttacagactgatgccatcttacaaatgcagttggcagttgaccag
gcacatagacaaaatttttcatcctttttcatgcctgtggtggatacagttaatccttgc
ctcgtgctgattgtacgaagggaacacattgttgaagacactgtggaagtattgaggaaa
agcaaaaatgtagacttcaagaagccattgaaggtaatttttgttggagaagaagctgtg
gatgctggaggtgttcggaaagagtttttcctcttgattatgagagatttgttagaccct
aagtatggcatgtttcgatattatgaggaatctagactcatctggttttcatttcagact
tttgaagaaattgatttatttcatctgattggtgttgtttgcggtcttgcaatctacaac
ttcacaatagttgaccttcattttccactggctttgtataaaaaactgctaaaccagaag
cctaccctcgatgacctgaaagaattgatgccgattgttggcaggagtatgcagcaattg
ttagattatccagaggaggctgtggaagacatcttctccctcaactttacgattgcagta
gaaaaatttgatgtaactgaagttaaagagttggttccagatggtgccaatattcctgtc
actaaatataacagacaggaatttgtggatgcatatgtggactatgtgttcaacaaatcg
attgctcctttatttgacggtttctatgaaggttttcacaaagtgtgtggtggaaaggta
cttcagctctttcagcctaatgaattacaggcgatggtgattggaaatgcaaattacgac
tggaaggaatgggaaaagaatactgaatataaaggagaatactgggccgagcatcctacc
atcaaattattctgggaggtattccatgaactgcctttggaaaagaagaagcgttttctg
ttgtttctaactggcagtgatcgtatcccaattattgggatgaagagcctaaaatttatc
attcagccaactggaggtggggatgagtatcttccagttgcacatacctgctttaatctt
ttggatctaccaaaatacactgacaaagaaacccttaggaccaagctagttaaagccatc
gatcactatgaaggcttcagtttggtgtaa
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