Hemiscyllium ocellatum (epaulette shark): 132826278
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Entry
132826278 CDS
T09720
Name
(RefSeq) very low-density lipoprotein receptor-like
KO
K20053
very low-density lipoprotein receptor
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132826278
Membrane trafficking [BR:
hoc04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
132826278
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF
SGL
Vgb_lyase
EGF_3
Motif
Other DBs
NCBI-GeneID:
132826278
NCBI-ProteinID:
XP_060698033
LinkDB
All DBs
Position
2:complement(148429051..148455039)
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AA seq
848 aa
AA seq
DB search
MLEIKHGQCDKSGCSTYKETSYIEEHLTPGLYSMEFRRMRGDLISVLSFNLDRGCWQDIS
IDRAPRAELQIKTICGVMEVKCNDGQCIPARWQCDGVADCDDGSDESEGVCYLTACPIGE
IKCGLESFRCIPVSWKCNGILDCDDGADEENCGQITCSPTEFTCSNGRCISKKFSCNGDN
DCGDGSDERGCLPTSCGPHEFQCSHSSECISLSWLCDHNVDCADQSDESPDRCGGITAPL
VTCAPNDHRCGSGECIHQKWFCDGDVDCKDGSDEVNCPPPTCGPDHFRCSDGSCIPGHRQ
CNGIGDCPDRSDENSCKKVAECTGPMDFKCQSGECINVSQVCNQQQDCKDWSDELIGKCN
VNECLLNNGGCSHLCHDLVIGYECDCPVGFRLVDRTCEDVDECQNSGTCSQICVNLEGSY
KCECHPGYHMDLTNSICKAIGEEPYLIFTNQHDIRKLGLHRYEYTQVAMQLRNAVALDVD
IAEDRIFWTESSQHAILSMSMNEGEQSSVITKIEDVDVPAGIAVDWIYKHIYWTDWGSKS
ISVATFDGTKRKTLFDTELREPTSVAVDPITGFMYWSDCGEPAVIEKAGMNGADRQHLVT
KEIQWPNGIALDLVKSCLYWVDSKLHTISSVGLNGQDRRTVLWSLEFLIHPFAVSVFEDN
VFWTDAASKTIYGANKFTGEEVKVLASNLHKPRDLTVYNKLLQPSGKNWCNKSLKNGGCD
FMCLPAPWFNSQSPKYTCVCPSGKELELNGKHCRIANVHLSTATLSTLSSSTIKYPSTEQ
HTETSRGRDSSITLDKVNKPENGSVAGWIALAILLLTMAVVAGYLKWQDLKRKTQQSMYF
ENPAFEGD
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaattaaacatggacaatgtgacaagtcgggctgcagcacctacaaggaaacc
agttatattgaggaacacttgactccgggactatactcgatggagtttagaaggatgagg
ggggatctgatcagtgttctgagtttcaacctggacagaggatgttggcaagatatttcc
attgaccgagcacccagggcagagcttcagatcaaaacaatctgtggagtaatggaggtc
aaatgcaatgatggacaatgtatacctgcgaggtggcaatgtgatggtgtagctgactgt
gatgatggatcagatgaaagtgaaggagtttgctatctgacagcatgccccattggagaa
attaaatgtggtttggagtcttttcgatgtattccagtttcctggaagtgcaatggtata
ctagattgtgatgatggtgctgatgaggaaaactgtggccagattacctgcagtccaaca
gagttcacttgctccaatggcagatgcatttccaagaagtttagctgtaatggtgataat
gactgtggcgatggaagtgatgaaagaggctgtctaccaacttcctgtggcccacatgag
tttcaatgcagtcattcttcagaatgtatatccttgagttggctgtgtgaccacaatgtt
gactgtgctgatcagtctgatgaatccccagacagatgtgggggcataacagctccactt
gtcacttgcgctcctaatgaccaccggtgtggttcgggtgaatgtattcaccagaaatgg
ttttgtgatggagacgttgactgcaaagacggaagtgatgaagtaaattgtccacctcca
acatgtggacctgatcacttcagatgcagtgatggtagctgtatcccaggacacagacag
tgtaatggaattggtgattgcccagatagaagtgacgaaaacagctgcaagaaagttgct
gagtgcacaggacccatggatttcaagtgtcaaagtggtgaatgtattaatgtatcacaa
gtctgtaatcagcagcaggattgcaaggattggagtgatgaactcattggaaaatgcaat
gtgaatgaatgcttgctcaataatggaggttgttctcatctctgtcatgatcttgtcatt
ggatatgaatgtgactgtcctgttggctttcgattggttgatcgaacctgtgaagacgtt
gatgaatgtcaaaattctggaacgtgcagccagatttgtgtgaacttggaaggaagttac
aagtgtgaatgccatcctggatatcacatggacctgactaattccatttgcaaggcaata
ggagaggaaccttatttgatcttcacaaatcagcacgacatccggaaactaggactgcat
cgttatgagtacacccaggttgccatgcagttgagaaatgctgtagcactggatgttgat
attgctgaagacagaattttctggactgaatcaagccagcacgcaattcttagtatgtcc
atgaatgaaggggaacaatcgtctgtgattaccaaaattgaagatgtggatgttccagca
ggaattgcagtggattggatctacaagcatatctattggactgattggggttcaaagtcc
atatctgtggccacattcgatggaactaaaaggaagacactctttgacactgaattaagg
gaaccaacttctgttgcagttgatccaattactgggtttatgtactggtcagactgtggt
gaaccagcagtgattgaaaaagcaggaatgaatggtgctgaccggcagcatcttgtgacc
aaagagattcagtggccaaatggcattgcacttgatcttgtgaaaagctgcttgtattgg
gttgattcaaagttgcacacaatatcaagtgtaggtctgaatggccaggatagaagaaca
gtgttgtggtcattggaattcctcattcatccttttgctgtctctgtatttgaggacaat
gtcttctggactgatgcagcaagcaaaaccatttatggagccaataagttcacaggagaa
gaggtgaaggtgttggcttccaaccttcataagccacgtgacctcactgtttataataaa
ctgttgcagccatctggtaaaaattggtgtaataaaagcttaaagaatggcggctgtgac
ttcatgtgtctccctgcaccttggttcaacagtcagtcaccaaaatatacctgtgtgtgt
ccatctgggaaggaactggagctgaatggaaaacactgtagaatagcaaatgtacatcta
tctacagcaacactgtctactttatcctccagtaccattaaatacccatcaactgaacag
catactgagacttctagagggagagattcaagcattacacttgataaagtcaacaaacca
gagaatggctctgtggctggttggattgcacttgccattttactcttgaccatggctgtt
gttgctggttacctgaaatggcaagacctgaagaggaagactcagcagagcatgtatttt
gagaacccagcctttgagggtgattaa
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