Hemiscyllium ocellatum (epaulette shark): 132826486
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Entry
132826486 CDS
T09720
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hoc03016
]
132826486 (trub1)
Enzymes [BR:
hoc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
132826486 (trub1)
Transfer RNA biogenesis [BR:
hoc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
132826486 (trub1)
Prokaryotic type
132826486 (trub1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
132826486
NCBI-ProteinID:
XP_060698426
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All DBs
Position
22:40703557..40787863
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AA seq
293 aa
AA seq
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MASSSGSVALAEKLQGLNGLFAIYKKKGPTSADVLNLLKNKLLKEAGIKQHPMKRKKQVL
KLGHGGTLDSAASGVLGKKRWGLKAKVVGIGKGTKMLSGMLSCSKKYTTVGEFGKATDTF
DALGTVTEVQSYDHITKDDLESTLKKFRGNIMQTPPIYSALKQNGQRLSCLVKKGEAVEA
KPARPVVVFSLSVQDYNPPCFTLNVECGGGFYVRSLVNDLGKELSSCAHVKELIRTKQGP
FTLDEHALQEEKWTIVEIVKAVESGVQLIPSEVACKKLKMDSQDDSEQVKEAT
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctagctcggggtctgttgctttggctgagaagctgcagggtctgaatgggctc
tttgcgatctacaaaaagaaaggccctacttcagcagatgtactgaatcttctgaaaaat
aagcttttaaaagaggctggcatcaagcaacatccaatgaaaagaaagaaacaggtttta
aagttgggacatggaggaactcttgacagtgcagcatcaggagtgcttggtaagaagagg
tggggattgaaagctaaagtggttggaattggcaaagggaccaaaatgcttagtggaatg
ttgtcctgctccaagaaatatacaacagttggggaatttggaaaggccacagacacgttt
gatgctctagggacagtgacagaagtgcaatcatatgatcacataacaaaggatgatctg
gaaagtactctgaagaaatttagaggaaacattatgcagactcctccaatatattctgct
ttgaagcaaaatgggcaacggctttcctgtttggtaaagaaaggagaagctgtggaagct
aaacctgccagacccgttgtggtttttagcctttctgtacaggattacaatcctccttgt
tttactctgaatgttgaatgtggtggtgggttttatgtccgcagtttggttaatgacctt
ggcaaagaactttcttcatgtgcccatgtaaaggagttgatcagaaccaaacagggtcct
tttacactggatgaacatgcacttcaagaggagaaatggacaatagttgaaatagtaaaa
gctgtagagtccggcgtgcaattaattccatccgaagtggcatgtaagaaattgaagatg
gattctcaggacgacagtgaacaagtgaaagaagctacttga
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