Hemiscyllium ocellatum (epaulette shark): 132826517
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Entry
132826517 CDS
T09720
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132826517 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132826517 (exosc1)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
132826517 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
132826517 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
132826517
NCBI-ProteinID:
XP_060698465
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All DBs
Position
22:50820436..50839931
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AA seq
194 aa
AA seq
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MAPLKYCIPGERLCSTEDGTPGNGTYSRHGYIFASLAGYVVKENDNGMMPVISVVRDSEP
QLLPEVGVVVTCKVTSINPRFVKVHILYVRSTPLKGTFRGTIRREDIRATEKDKIEVYKC
FRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSEAGEQMVPISWCEMQCPKSHGKE
FRKVARVQPEFLHT
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctgaagtactgcatcccaggggagagattatgcagcactgaggacggcact
cctggtaatggcacctactccagacatggatatatttttgcatctttagctgggtatgtg
gtgaaagaaaacgacaatggaatgatgccagtcatatcagtagttcgggactcagagcct
cagctcctgccagaggtcggtgttgttgtaacatgcaaggtgaccagcattaaccctagg
tttgtcaaagtgcatattttatatgtacgatccactccactgaaaggcacttttcgagga
accatcagaagagaagatattcgagcaacagaaaaggacaagatagaggtttacaaatgc
ttcagacccggtgatattgttttagcaaaagtgatctcgttaggtgatgctcagtccaac
tacttgctgacaacagcagagaatgaacttggtgtagtagtcgcacacagtgaagcaggt
gagcagatggttcctatcagctggtgtgagatgcagtgccccaaatcccatgggaaagag
ttccggaaagtagctcgtgttcaacctgaattccttcacacctga
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