Hemiscyllium ocellatum (epaulette shark): 132826756
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Entry
132826756 CDS
T09720
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04510
Focal adhesion
hoc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132826756 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132826756 (lamb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
ATG17_like
BNR_6
Motif
Other DBs
NCBI-GeneID:
132826756
NCBI-ProteinID:
XP_060698913
LinkDB
All DBs
Position
23:complement(40498823..40605091)
Genome browser
AA seq
1782 aa
AA seq
DB search
MFHFRILTVLVILWHCAIAQGPEFSYGCAEGSCYPATGDLLIGRADRLSATSTCGLHKPE
PFCIVSHLQEEKKCFSCDSRTVFAENPKSHRIENVVTTFAHNRLNTWWQSENGVENVSLQ
LDLEAEFHFTHLIMTFKTFRPAAMMIERSSDFGKTWQVYRYYAYDCESSFPGIPTGSLKK
VDDIICDTRYSDIEPSTEGEVIYRVLDPAFKIEDPYSQRIQNMLKITNLRIKFTKLHTLG
DNLLDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPVHDSDDQDVDGKVHGRCVCRHN
TKGLNCELCQDFHHNAPWKPAEGRNSNACQRCSCNGHADKCHFDMAVYIASGNVSGGVCD
GCRNNTMGQRCEQCKPFYYQHPERSIRASDICEPCNCDPAGSLNGGICDSYTDLTANLIA
GQCRCKLNIEGERCDLCKEGFFGLSADDPLGCQSCTCNHLGTHPGGTPCDDVTGSCFCKR
LVTGRNCDQCLPQHWGLSSDLDGCRPCDCDLGGSYSNDCSAETGQCPCKNHMVGRRCNEV
ESGFYFIALDHYTYEAEEAALGPEATIVQRQSPQTHSPTWTGIGLVRAPEGAYLEFHVHN
IPYSMEYDLLIRYEPQLPKNWEEAKITVFRPGKIHSSSRCGNTTPADDNQVFSLPSGSRY
VVLPRPVCFEKELNYTIRLELTKYSTDDEMETPYTLIDSLVLMPHCKSLDIFSVGESSEI
VTNKAWETFQRYRCLENSQSVTKTPMTDVCKGILSSISSIIHEGALPCECDPQGSLSSVC
NPNGGQCQCRSSVVGRNCDRCAPATYGFGPSGCRPCDCHLEGSVNEFCNPGTGQCRCKEG
VYSRQCDQCQPGYWGFPTCRPCQCNGHTDLCDLESGECLGCKGHTSGHNCDSCMSGYYGN
PILGSGDHCRPCPCPDGPDSGRQFASGCYQDPSSQNIVCLCQDGYTGARCDECASGFYGN
PNETRGHCQGCQCSNNIDMTDAESCDKQTGACLKCLYHTEGEHCELCKLGYYGKALQQDC
KKCVCNYLGTVKEQCTSADECHCNQTTGQCPCLPNVTGLMCDQCAPNTWKLASGTGCELC
NCNEIHSRAASCNEFTGQCQCMAGFGGRTCSDCQEFFWGDPDVECMRCDCNEFGIETQQC
NQANGHCICREGIAGERCDKCARGYSGTFPHCEPCHACFRLWDKEIEELTNQSKQLVAQA
DEIKASGIVGPYQETVSAVQDKINDIRALLAENPATEPLDSIGDLLDEAKKKVLDLAEKV
TVIESDLATTADRSNVTDQEISVLQTDAESLKAVVNELAEQLEYIKNSDVHGALDSVQKY
FNQSVEAEMTVNASTTDPGSILLESLSTREKVDDMISQSQDRFEQQQKEHSQSLEELADK
LQSLDLSPLSKKICGGPAGMPCAEAECGGPNCRADDGTRKCGGIGCDGLVTLAHNAWQNS
MDFDTEILNALAEVDQLSKMVADAKVKADEAKLNAQKVLLRTNATKEKVDKSNEDLRNLI
KQIREFLTQDGADLESIEAVANEVLKLEMPTTPQQLQDLTNDIRDRVESLSDVEVILNQS
AADIERAEALLDEARKAKIHATDVKVAADRVKEALDEAEKAQNAAVKAIKQANEDIEGTQ
DLLTSIESETVASEQSLNNATERLAQIEKDIDEIKQKTTDNTHTAENIGDTADKIKQTAD
EAKQVLDTVLKGKYTIVEDTIIKKSDAASDARKKAKLLQVEAESLLSDASRKLELLKKLE
KSYEDNQKALEEKAQKLIKLEEDVRLLLQTISQKVAIYSTCL
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgttccacttcaggattttaactgttttagtcatactttggcactgtgctattgcacag
gggccagagttcagctatggatgtgctgagggaagctgttacccagccacaggagacctg
ttgattgggcgtgcagatagattatctgccacatccacctgtggtttgcataagccagag
cccttctgcattgtcagccaccttcaggaagaaaaaaagtgcttttcgtgtgattcgcgc
acagtttttgctgaaaatccaaaaagtcatagaattgagaatgttgtcacaacatttgct
cacaatcgactaaatacctggtggcaatctgaaaacggtgtggaaaatgtttcccttcag
ctggatctggaagctgagttccattttacccacctcatcatgactttcaagactttccgc
ccagctgctatgatgatcgagcgatcttccgattttgggaaaacctggcaggtctatcgg
tattatgcttatgattgcgagtcgtcctttccaggcattccaacaggatcactaaagaaa
gtggacgacattatctgtgacactcggtactctgatattgagccttctactgaaggagag
gttatctatcgtgtgttggatccagcctttaaaattgaagatccatatagccagagaata
caaaatatgctgaagatcacaaatctaaggataaagttcaccaaactccatactctgggt
gacaatttgctagactctcgaatcgaaatcaaagaaaaatattactatgctatctatgac
atggtagttcgaggaaattgtttctgctatggacatgccagtgagtgtgctcctgttcat
gattctgatgaccaggacgtggatggaaaggtgcatggtcggtgtgtatgtcgtcacaac
accaaggggttaaactgtgagctatgtcaggacttccaccataatgcgccttggaaacct
gctgaaggacgcaacagcaatgcatgccaaagatgtagctgcaacgggcatgctgataaa
tgtcattttgacatggctgtgtatatagcatctggtaacgttagtggtggtgtttgtgat
ggctgtcggaataatacaatgggacaacgctgtgaacaatgtaaacctttctactaccag
catccagaacgaagtattcgtgccagtgacatctgtgaaccttgtaactgtgaccctgct
ggatcattaaatggtggaatctgtgacagctacacggatttgacagctaatctcatagcg
ggacagtgccgctgtaagctcaacattgagggtgaacgctgtgatctctgcaaagagggt
ttctttggcctaagtgcagatgatccactgggttgccagtcatgtacctgtaaccatttg
ggaactcatccaggcggaactccgtgcgatgatgtaacgggaagttgcttctgtaagcgt
ctagtgacgggaaggaactgtgatcagtgtttgccgcagcactggggattaagcagtgat
cttgatggctgtcgcccctgtgactgtgacttggggggatcctacagcaatgactgttct
gcagagacaggccagtgtccatgcaaaaatcatatggttggacgtcgctgcaatgaagtt
gaatctgggttttattttattgccctggatcattacacatatgaggcagaggaggctgcc
ttgggtcctgaagcgacaatagtacagcgccagtctccgcaaactcattctccaacctgg
acaggaattggattggtaagggctcctgaaggagcatatctagaattccatgtacacaac
atcccatattccatggagtatgatctgctgatacgttatgaacctcagctaccaaaaaat
tgggaagaagcaaaaataactgtgttccgtcctggtaaaattcacagcagcagtcgatgt
gggaatactacacctgctgatgacaaccaagtcttttctctgccatcaggatcaaggtat
gtggtcctacctcggcctgtatgctttgagaaagaacttaattacaccattcgtttagag
ttaacaaagtactcaactgatgatgaaatggaaactccttatacactcatagattcgctt
gtactcatgccccactgcaagtcactggatatattctctgtaggggaatcgagtgagatt
gtcacaaacaaagcctgggaaaccttccaacgataccgctgcttggagaacagtcaaagt
gttactaaaactccaatgacagatgtctgtaagggcatcctgtctagcatttcttccata
atccacgaaggagctttaccatgcgagtgtgatcctcagggatcgctcagttctgtttgt
aatcccaatggaggacagtgccaatgccgctccagcgtagttggccgtaactgtgaccga
tgtgctcctgcaacttatggttttggtcctagtggctgccggccttgtgattgtcatctg
gaaggttcagtcaatgaattttgcaaccctggtactggccagtgtcggtgtaaagaaggg
gtctatagtcggcagtgtgatcagtgtcagcctggttactggggatttccgacctgtcgc
ccgtgccagtgcaatggacatacggacctctgtgacctagaaagtggcgaatgtttgggc
tgcaaaggtcacactagtggacataattgtgacagctgtatgtcaggttattatgggaac
cccatacttgggtcaggtgatcactgtcgcccatgtccttgcccagatggtccagattct
ggacggcagtttgcctctggctgttaccaggatcctagttcacaaaatattgtgtgcctc
tgtcaagatggatacacaggtgctcggtgtgatgaatgtgcttctgggttttacggtaat
ccgaatgaaacaagagggcattgtcaggggtgccagtgcagcaacaacattgacatgact
gatgcagaatcatgtgacaagcaaactggagcctgcctgaagtgtctatatcacacggag
ggtgaacattgtgaactctgcaagcttggttattatggcaaggcactgcaacaggattgt
aaaaaatgtgtctgcaactacttgggtactgtaaaggagcaatgcacttctgcagatgaa
tgccattgtaaccaaaccactggtcaatgcccgtgtcttccaaatgtgactggtcttatg
tgtgatcagtgtgcacctaatacttggaaactagcaagtggaacaggctgtgaactctgc
aattgtaatgaaattcactcacgtgcagcatcttgtaatgagttcaccgggcagtgtcag
tgcatggctggatttggagggcgcacatgtagtgactgtcaagaattcttctggggagat
cctgatgtggagtgtatgagatgtgattgtaatgaatttggtattgagacccagcagtgt
aaccaagccaatggccactgcatctgtcgggaagggattgcaggagaacgttgtgataaa
tgcgctcgagggtactctggtacattccctcattgtgaaccatgtcatgcatgcttcaga
ctgtgggataaagaaattgaagagctgactaatcaaagcaagcaacttgtagctcaggct
gatgagatcaaagctagtggaatagttgggccttaccaagaaactgttagtgctgtccag
gacaaaattaatgacatacgagctctacttgctgaaaatcctgcgactgaaccacttgac
agtattggggacctcttggatgaagccaagaagaaagtacttgaccttgcagaaaaggtt
actgtaattgaatcagatcttgcaactacagcagaccgaagtaatgtgacagaccaagaa
ataagtgtccttcagaccgatgctgaaagtttgaaagctgttgtaaatgagctagcagaa
caattggaatacattaagaactctgatgtccatggagccttggacagtgtccagaaatat
tttaaccaatctgttgaggctgaaatgacagttaatgcttcaaccactgatcctggtagt
atactgctggaatccttgagcactcgtgaaaaggtggatgacatgatttcacagagtcag
gatcgctttgagcaacagcaaaaagaacattcacaaagtctagaagaactagctgacaaa
ttgcaaagtctagacctctcaccattaagcaaaaagatttgtggtggccctgcaggaatg
ccatgtgccgaagcggagtgtggtggtcccaactgtcgcgctgatgatggaaccagaaag
tgtggtggcattggctgtgatggacttgtaactttggcccataatgcatggcagaattcc
atggattttgacaccgagattctaaatgctttggcagaagtggatcagctttcaaaaatg
gttgctgatgcgaaagttaaagcagatgaagctaaactaaatgcacaaaaggtcttgtta
agaaccaatgcaacaaaagaaaaagtggacaagagcaatgaagacctcagaaatcttatt
aaacaaatcagagaatttcttacacaggacggcgctgatctggagagcattgaggcagtt
gccaatgaagtactgaagttagaaatgcccaccactcctcagcagcttcaggacctgacc
aatgacattcgggaccgagtggaaagtctgtcagacgtggaagtgattctaaaccagagt
gctgcagatattgagcgggctgaagcattgttggatgaagccaggaaggccaaaatccat
gcaacagatgttaaagttgcagctgatcgtgtgaaggaggccttggatgaagcagaaaag
gcacagaacgcagctgtgaaagcaattaaacaagctaacgaagacattgagggaacacag
gaccttctgacctcaattgaatcagagacagtagcatcagaacaaagcctcaacaatgca
actgaacgcctggcacagattgaaaaggacattgatgaaataaaacaaaagaccactgac
aacacacatactgcagaaaacattggggatacagcagataaaataaagcagactgcagat
gaagccaaacaggtactcgacactgtcctgaaaggcaagtacaccattgtagaagacact
atcatcaaaaaatctgatgcagcttctgatgctcggaaaaaagccaagttattgcaggtc
gaagctgaatctttgttatcagatgcaagtcggaaacttgagttattaaagaaactggaa
aaaagttatgaagacaaccaaaaagctttggaggaaaaagcccaaaagttaataaaactg
gaagaagatgtgcgcttgttgctgcaaacgattagccagaaggttgccatctatagtacc
tgtttataa
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integrated database retrieval system
