Hemiscyllium ocellatum (epaulette shark): 132827036
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Entry
132827036 CDS
T09720
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04142
Lysosome
hoc04144
Endocytosis
hoc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132827036 (cltcl1)
04142 Lysosome
132827036 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
132827036 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132827036 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hoc04147
]
132827036 (cltcl1)
Membrane trafficking [BR:
hoc04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
132827036 (cltcl1)
Exosome [BR:
hoc04147
]
Exosomal proteins
Proteins found in most exosomes
132827036 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
132827036
NCBI-ProteinID:
XP_060699433
LinkDB
All DBs
Position
24:9366167..9422517
Genome browser
AA seq
1689 aa
AA seq
DB search
MAQILPIRFQEHLQLQNQGVNPANIGFSTLTMESDKFICIREKVGEQAQVVVIDLNDPAN
PIRRPISADSVIMNPASKVIALKAGKTLQIFNIEMKSKVKAHNMVEEVTFWKWISLNTVA
LVTETAVFHWSMEGDSQPQKMFDRHASLAGCQIINYRTDLQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFADFKLEENPTPSTLFCFAVRSQAGGKLHIIEVGQPAAGN
QPFTKRAVDVFFPPEAQTDFPVAMQIGTKYGVIYLITKYGYIHLYDLESGACIYMNRISA
ETIFVTAPHEPTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRMAVRSNLAGA
EELFARKFNTLFAQGNYAEAAKVAASAPKGILRTPDTIRKFQTVPAQPGQASPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVSPDQGLQFAQMLVQDE
EPLANINQIVDVFMENNLIQQCTSFLLDALKNNRPSEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGALSV
EDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDSERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEEVIKNLITVVRGQF
STDELVGEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPFY
DSSVVGKYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPQLWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNNVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIDHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VKAANKNNNWEDLVKFLQMARKKAKESYVETELIFALAKTNRLSELEEFVNGPNNAHIQQ
VGDRCYDDGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFAC
VDGQEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAVITMMS
HPTDAWKEGQYKDIIAKVANVELYYKALQFYLDYKPLLINDLLMVLSPRLDHTRAVTFFS
KVNQLPLIKPYLRSVQNHNNKAVNEALNNLLTEEEDYQGLRTSIDAYDNFDNIILAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDHLYKDAMQYTAESKDTELSEKLLQWFLEE
GKQECFASCLFTCYDLLRPDVVLELSWRHNIMDFAMPYFIQVMREYLSKVDELMEKPTDQ
LVKSKAMSVDKLDASDSLRKDEDQVAEPAPLVFGQQLMLTAGSTAVPPQPGYAYGYPAGY
AQPAYGFNM
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atggcacagatacttcccatccgcttccaggagcacctgcagctccaaaaccaaggtgtg
aatcctgccaatattggattcagtactcttaccatggaatccgacaagttcatctgcatc
cgggagaaagtgggagaacaggcacaagtggtggtgattgatctgaatgatccagcaaat
ccgattcggcgtccaatatctgctgacagtgtcatcatgaacccagcaagcaaagtgatt
gcactgaaagctggcaaaaccctacaaatatttaacattgaaatgaagagcaaagtgaaa
gctcataatatggttgaagaagtcacattctggaaatggatttctttaaacactgttgcc
ctagtaactgagactgcagtattccattggagcatggaaggtgactctcagccacagaag
atgtttgataggcatgcaagcttggctggctgtcaaatcattaactacaggacagatctt
cagcagaagtggttgcttctaattggaatttctgcacagcaaaacagggtagttggtgca
atgcagctgtactctgtggacaggaaggtgtcccagccgattgagggacatgctgcagct
tttgctgacttcaaattggaagagaatcccacaccgtcaacactcttttgctttgcagtt
cgtagtcaagcaggaggaaagttacatataatagaagtaggtcagcccgctgctggaaac
cagccttttacaaagagagcagtggatgtgtttttccctccagaggcccaaactgacttt
ccagtagcaatgcaaattggaacaaaatatggggttatatatctcattaccaaatatggc
tacatccacttgtatgacttggaatctggtgcttgtatctacatgaaccgtattagtgct
gagaccatttttgtgactgctccccatgaacctacatctggcatcattggagtcaataaa
aaaggccaagtattatctgtttgtgtggaagaagagaatattgtaaactacgcaactaat
gtgctccaaaacccagaccttgctctccgaatggctgtgagaagcaatcttgctggtgct
gaggagctctttgcacgaaagtttaacactttattcgcacaaggaaattatgctgaagct
gctaaagttgctgcatcagctccaaagggtattctacggactccagacacaattagaaaa
ttccagacagtcccggcccagccagggcaggcttcacctcttctgcagtattttgggata
ctccttgatcagggacaattgaacaagtatgaatcactggaactctgccgtcctgtcttg
caacaaggccgcaagcaactgctggaaaaatggctgaaggaagataagttggagtgttct
gaggaactgggagacttggtgaagacagctgatcccacactagctttaagtgtctatctc
cgagccaatgtgccaaataaagttatacagtgttttgcagaaactgggcaattccagaaa
attgttctgtatgcgaaaaaggttggttacactcctgactgggtcttcctgctgagaaat
gttatgcgtgtgagccctgaccaaggacttcagtttgcacagatgcttgtccaggatgaa
gaacccctagctaatattaatcagattgtggatgtatttatggaaaataacctgatccag
cagtgtacatctttcctattagatgcgttgaagaataacaggccttctgagggtcactta
caaacacgccttcttgaaatgaatctgatccatgcaccgcaggtggctgatgcaatccta
ggaaaccagatgtttactcactatgatcgtgcacatattgcccagctatgtgaaaaagct
ggcttgttgcagagggctttggagcactatacagatttgtatgatatcaaacgtgctgtt
gtacatactcaccttttgaaccctgagtggctggtgaacttctttggtgcactctctgta
gaagactcccttgagtgcttgcgtgccatgttgtcagctaacatccgccagaatctgcag
ctttgtgtgcaagtagcatccaagtaccatgagcagcttggcactcagtcattggtggaa
ctttttgaatcctttaagagttatgagggattgttttatttccttggatccattgtgaac
ttcagtcaggagcctgatgttcacttcaagtatattcaggcagcatgtaaaactggacaa
attaaagaagttgagcgtatatgccgtgagagcaactgctatgattcagaacgtgtgaag
aatttcctgaaggaagccaaactgacagaccagcttcccttaatcattgtgtgtgaccga
tttgactttgtccatgacctcgttctgtacctgtatcgcaacaacctgcagaaatacatt
gaaatctatgtccagaaggtgaatccaagcaggcttccagtagtggtaggtggactactg
gatgtggattgctctgaagaagttatcaaaaatctgatcactgtagtccgtggacagttc
tcaactgacgagcttgtgggcgaagtagagaaaagaaacagattgaaattgttgcttccc
tggctggaggctagaattcatgaaggctgtgaagagcctgctactcacaatgctttagct
aaaatctatatcgatagcaataacaatcctgagcgttttctgcgtgaaaaccccttctat
gatagctctgtggttggcaagtactgtgaaaagagggatccgcatttggcttgtgtggct
tatgagcgaggccagtgtgatctggatctcatcaaggtttgcaatgagaactctctattc
aagagtgaggctcgttatcttgtacgtagaaaagatccacagctttgggccaatgttctt
gaagaaaataatccttttagacgccagctgattgaccaggttgtccaaacagccctgtct
gaaacccaggatccagaagaagtatctgtcactgtgaaagcctttatgactgccgacctc
cccaatgagctgattgaactgctcgagaagatagtcttggataacaatgtctttagtgaa
cataggaacctacagaacctcttgattcttactgctattaaagcagatcgcacccgtgtt
atggagtacattaatcgtctcgacaactacgatgctcctgatattgcgaacattgccatc
agtaatgagctttttgaagaagcatttgcaatctttcgaaagtttgatgtgaacacttct
gctgtgcaggttctgattgaccacattggcaatcttgatcgtgcttatgaatttgcagaa
cgttgtaatgagccagcagtatggagtcagctggcaagagcacaattacagaaggatttg
gttaaagaagccatcgattcctacatcaaggctgatgatccttctgcctatatggaggtt
gtgaaagcagccaacaagaacaataactgggaagacctggtgaaatttctgcaaatggct
aggaagaaagccaaagagtcatatgtggagacagagttgatatttgctctggcaaagacc
aaccgtttgtctgaactggaggaatttgttaatggacccaacaatgcccacattcaacaa
gttggtgatcgctgttatgatgatggcatgtatgatgcagcaaaattactttacaacaat
gtgtccaacttcgcccgcttggcttccactctggtacatctaggcgagtaccaagctgct
gtggacagtgctcgcaaagctaacagcaccagaacttggaaagaggtttgttttgcctgt
gttgatggccaagaattccgtcttgcccagatatgtggcctacacattgtcatccatgca
gatgaacttgaggagctgatcagttactaccaggatcgagggtattttgaggaactgatc
gctctcttggaagcagcattgggcttggaacgggctcacatgggaatgttcacagagctg
gcaatactatactccaaattcaagccgcaaaagatgagggaacacttggaacttttctgg
tccagagtcaatattccaaaggtccttcgtgcagcagagcaggcacacctttgggctgag
ctggtcttcctttatgataaatatgaagagtatgacaatgcagtcataactatgatgagt
cacccaacagatgcttggaaggaagggcaatataaagatataatcgcaaaggttgctaac
gtagaattgtattacaaggccctacagttctacttggattacaaaccactgttgatcaat
gatctgttaatggtgctatcaccacgtttagaccataccagggcggtcactttcttcagc
aaggtgaaccaattgcctctaataaaaccatatttacgctctgttcaaaatcacaataat
aaagctgtgaatgaagctctgaacaacctgcttactgaagaggaggattatcagggtttg
cgtacatctattgatgcatatgataacttcgacaacattatccttgctcagcgcctggaa
aagcatgagctaattgagttcaggcgtattgctgcttatctctacaaaggtaacaatcgc
tggaaacaaagtgtggaactctgcaaaaaagaccacttgtacaaggatgcaatgcaatat
acagctgaatccaaggacactgagctctctgagaaacttctgcaatggttcctggaagag
ggcaagcaagaatgttttgcgtcctgcttattcacgtgctatgatttgttacggccagat
gtggttcttgagctgtcatggagacataacatcatggactttgcaatgccatattttatt
caagttatgagggaatatctcagcaaagttgatgaactaatggaaaagccaactgatcaa
ctggttaaatccaaagcaatgtcggttgataaacttgatgcttcggatagcttgagaaaa
gatgaagaccaagtggctgaaccagctcctctagtatttggtcagcagttaatgttgaca
gcaggttccactgcagtccctccccagcctggctatgcttatggttatccagctggctat
gctcagcctgcttatggcttcaacatgtag
DBGET
integrated database retrieval system
