Hemiscyllium ocellatum (epaulette shark): 132827085
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Entry
132827085 CDS
T09720
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03030
DNA replication
hoc03410
Base excision repair
hoc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132827085 (pole)
03410 Base excision repair
132827085 (pole)
03420 Nucleotide excision repair
132827085 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hoc03032
]
132827085 (pole)
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132827085 (pole)
Enzymes [BR:
hoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
132827085 (pole)
DNA replication proteins [BR:
hoc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
132827085 (pole)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
132827085 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Spidroin_N
Motif
Other DBs
NCBI-GeneID:
132827085
NCBI-ProteinID:
XP_060699532
LinkDB
All DBs
Position
24:complement(18535144..18677403)
Genome browser
AA seq
2282 aa
AA seq
DB search
MVLQNSGKLRADRQPVADTSYSEDGSSLPALKRLERSQWTDEMDARFGFDRLKDPGEKTG
WLINMHPTELLDEDKRMISAVDYYFIEEDGSRFKVALPFEPYFYVATKKGCEREVSSFLS
KKFQGKISKISTIPKEDLDLPNHLVGLKRLYVKLAFNTVDDLIKVRKEISSAVKKNKERE
KSNDAYTVMLSSALAGGNVTEEEGTSKKISDQMENIIDIREYDVPYHVRVSIDLKIQVAH
WYNIRIRGGAYPPEIIRRDDLVERPDPVVLAFDIETTKLPLKFPDAENDQIMMISYMIDG
QGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEASLIRRWFEHLQETKPNILVTY
NGDSFDWPFVEARAAVHGLNMYKEIGFQKDSQGEFKASQSIHMDCYRWVKRDSYLPVGSQ
NLKAAAKAKLGYDPVELDPEDMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALC
TIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKLTNDGHVLDSETYVGG
HVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEHTMRHAIEEEEKLPMDQVTNFQEVCDE
IKKKLNCLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPGAF
CQRKMTWTWRGEFMPASRSEYHRIQQQLESEKFPPSFPNGPPQAFHELSREEQAKYEKKR
LADYCRKAYKKIHITKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGSHKVWKKKLSAA
IESGDATEIKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCHTGANI
ITQARELIEQIGRPLELDTDGIWCVIPNSFPENFVIKSNNPKKPKVTISYPGAMLNILVK
ERFTNEQYQELVDPASLTYVTRLENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNED
GSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKAA
NMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFVISK
KPEGAPVTERAIPLAIFQAEPSVKKYYLKKWLKNPSLQDLDIRLILDWDYYIERLGSAIQ
KIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKISELFTNTGVRQVTSNQRLV
KDQQSQISDLEDFGVPKRRAQPVIPISTKRRRGMNDESQEQSQDLELTQSWREILGPPPP
LGKTKDEQLVWLRYQKKKWELQSKQRKARRKRRKLADGADAPGRPIRDGPTTSLGSFLRR
TARTILDMPWQIVQIAETSQPGIFKLWAVVGHDLHCIKLNIPRVFYVNQRIPKADDSAVY
KKVNRILPRSNIVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYETQIPLLFRALIQL
GCICMVNRQLSPHLGGREVDTFELEQLEMRSLAQFNYLEPGSIRHIYFYHNAQGNKALFG
LFIPSQRKASVFVLDTVRSNQMPNLNNLYASERTAMLEKLDEELLPPDKHTFEVQAEKDP
KLIYRAIQRLLLNYKDEKRGPTLVAVQSKWQLKRLTNGMSVLDEFPLVPVHVNDDISYGV
LDWQRHGVRRMIRHYLNLDSILSKAFEMARYYHIPIGNLPDDISTFGSDLFFSRHLRRHN
HLLWLSPTSRPDLGGKEADDNRLVMEFDEKSTVEINNPGCYSTVSVELDIQSLAVNTILQ
SHHINDMEGASSIGISFDVIQQASLEDMMAGNQAANALASYDEAALCSNTFRILKSMVVG
WVKEITHYQNVYADNQVMHFYRWLRSPSSLLYDPALHRILQNMMKKLFLQLVAEFKRLGS
SVIYANFNRLLLCTKKRRIEDSMGYVEYITKSIHSREIFHSLSISFSRCWEFLLWMDPTN
YAGIKGKLSSSILIGEVESNKGTKENVEDDSNDDEEIHSEDEETGTDVEDLLDNNWNIMH
YLPQASSCQSYFLMIVSAYIVAVYHSMKEELRRSAPGCTPIKRRGTSQISQEPAGETGAS
AGMITFSQEYVSNELTHNFFTITQKILKKVSSNRHSTEPSEMFPVLPGSYLPFNNPALEF
IKSVCKILSLDSNITNQVNKLKRDLLRLIDVGEFSEEAQFKDPCQSYILAEVICKNCNFC
HDLDLCKDPSILQDGAVLPKWCCTNCQTEYDSDSIEIQLVEALKKKMMAYTLQDLVCSKC
KGIKEANMPVYCTCARDFDLTISIKGFTEQIQVFRNIARHYSMPFLLETVDWMFRMNTHL
RP
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgcagaacagtgggaagctgagagcggacagacagccggtggccgacaccagc
tactctgaggatggctcctcccttcctgcactcaagcgcctggagcgcagtcagtggaca
gatgagatggatgcacgatttggatttgaccgtctcaaagatccaggcgagaagactggc
tggcttatcaacatgcacccaacagaactcctggatgaagataaacgaatgatcagtgct
gtggattattattttattgaagaagatgggagcagatttaaggttgctctaccttttgaa
ccctatttctatgttgccacaaaaaagggctgtgaaagagaggtttcatcgttcttgtcc
aaaaaatttcaaggcaaaataagtaaaatatcaaccattccaaaagaggacttggatctg
cctaaccacttggttggcttgaagagactctatgttaagctcgcttttaatacagttgat
gacctgataaaagtccgaaaggagatttcctcggctgtaaagaaaaataaagaacgggag
aaatcaaatgatgcctatactgttatgttatccagtgccttggctgggggcaatgtgact
gaagaggaaggaacatcaaaaaaaatttctgatcaaatggaaaacataattgacatccga
gaatatgatgtcccttaccatgttcgagtatctattgatttgaagattcaggtggcacat
tggtacaatatacgaattcgtggcggtgcctatcctcctgagattatacgtagggatgac
ttggttgagcgaccagatcctgttgttttggcatttgatattgagactacaaaattgcca
ttaaagtttccagatgctgagaatgaccagatcatgatgatttcctacatgatcgatgga
cagggttatttgattacaaacagggaaattgtgtctgaagatattgaggattttgagttt
acaccaaagccagaatatgagggccctttttgtgtttttaatgaaccagatgaggcaagc
ttaattcgtaggtggtttgaacaccttcaagaaacaaagcctaacatacttgtgacatat
aatggtgattcttttgattggccttttgtggaggcacgagctgctgtgcatggtttgaac
atgtacaaggagattggctttcagaaggatagtcagggcgagttcaaagctagtcagagc
attcacatggactgctacaggtgggtgaaacgagacagctacctccctgtaggtagccag
aacttgaaagctgcagctaaagccaaacttggatatgaccctgtggaattagatcctgaa
gatatgtgtcgaatggccactgaagaaccacagactttagccacatactccgtgtctgat
gctgtggctacctattacatgtacatgaagtatgtgcaccccttcatttttgccttgtgt
acaatcatccctatggaacctgatgaggtgctcagaaaaggttctggaacactttgtgag
gcactcctcatggtgcaggcttttcatgccaatataatcttcccaaacaagcaggaacaa
gtctttaataaactaacaaacgatggtcatgtgcttgattcagagacttacgtaggagga
catgtggaggctttggaatcgggagtttttcgtagtgacataccatgccgatttaaaatg
aacccagcagcatttgatttcttgctgcaaagagtggagcataccatgcggcatgccatt
gaggaagaggagaaacttcccatggaccaggttactaatttccaagaagtctgtgatgag
attaaaaagaaactgaactgtttgaaggaagttcctaacaggattgaatgtccactcatt
taccacttggatgttggggcaatgtacccgaacatcattctgaccaatcgcttgcagcct
tctgccattgtggatgaagcgacctgtgcagcctgtgatttcaacaaaccaggtgcattc
tgccaacgcaagatgacctggacatggcgaggagagtttatgccagcctctcgcagtgag
taccatcgtattcaacagcagcttgagtctgagaagttcccaccctctttcccaaatgga
ccaccacaagctttccatgaattatcccgtgaagagcaagccaagtatgaaaagaaacga
ttggcagattattgccgcaaagcttacaaaaaaatccatattaccaaagtagaggaacga
gtaactacgatttgtcaacgtgaaaattctttctatgtagatacagtacgagcttttcgt
gaccgacgatatgaatttaagggttcacacaaggtttggaagaaaaaattgtctgctgcc
attgaatctggagatgctacagaaatcaagcgttgtaagaacatggaaattttgtatgag
tctctgcagctggctcacaagtgtattctaaactccttctatggctacgtcatgcgtaaa
ggggctcgttggtattccatggaaatggctgggattgtctgtcacactggagccaatatc
atcacacaggccagagaactgattgaacagattggacgacccttagagctggatactgat
ggtatttggtgtgtcattcctaattctttcccagagaactttgtcatcaagtcaaacaat
cctaaaaaacccaaggttacaatctcttaccctggtgcaatgcttaatatcctagtgaag
gagcgattcacgaatgagcagtaccaggagttggtggaccctgcatcgttgacttatgtc
acccgcttagaaaacagcatattttttgaggttgatggtccttatctggccatgattctg
ccagcttccaaagaggaaggaaagaagctcaaaaaaagatatgcagtgtttaatgaggat
ggctctctggctgaactaaaaggctttgaagtgaagcgacgtggggaattgcagctcatt
aaaatttttcagtcttctgtctttgaggcctttctgaaaggtaccacgctggaggaagtg
tatgcatctgttgctaaggtagcagattactggttggacgtattatacagcaaggcagct
aatatgcctgactccgagctatttgaattgatctctgagaatagatcaatgtcacgtaaa
ttagaggattatggagaacagaagtctacctcaataagtactgccaaaaggcttgctgaa
tttcttggggaccaaatggtgaaggatgcagggctgagttgccgttttgtcatctccaag
aaacctgagggtgccccagtcactgaaagagcaattccactggccattttccaggcggag
ccaagtgttaaaaagtactatctgaagaagtggttgaagaatccctcattacaggacctg
gatattcgattaattctggactgggattattacattgagcgacttggcagtgccatccag
aagattatcactatcccagcagcccttcagcaggtaaagaatccagtcccacgagtccga
caccctgactggcttcacaagaaacttttggaaaagaatgatgtttacaaacaaaagaaa
attagtgaactattcactaacactggagtcaggcaggtgacatctaaccagcgtctggtg
aaagaccaacaatcgcaaattagtgatttagaagattttggtgttcccaagcgcagagca
cagccagttatcccgatcagtacaaagcgaaggcgtggtatgaatgatgagagtcaggaa
caatctcaagacctagaattaacccaatcttggagagagatactgggtcctccaccacca
ttgggaaagacaaaggatgaacagttagtgtggctgaggtaccagaagaagaagtgggag
cttcagtcaaagcaaagaaaggcacgtagaaagagaagaaagcttgctgatggtgcagat
gcaccaggtagacctattcgagatggtcccacaaccagtcttggcagctttttgcgtcga
actgcccgtaccattcttgacatgccatggcaaattgtacagattgcagaaacaagtcag
cctggcatcttcaaactgtgggctgttgttggacacgatttgcattgcattaaactcaac
attcctcgagtattctatgtcaatcagcgcatccctaaagcggatgatagcgctgtttac
aagaaagtcaaccgcattcttcctcgttccaatattgtttacaacctatatgaatattct
gtaccagaagacatgtatcaggagcacatcaatgaaattaatgctgacctctctgctcca
gacattgagggagtctatgaaacacagattcccctgctctttcgtgccctcatccagctt
ggatgtatctgcatggtgaataggcaattatcacctcaccttggaggacgagaagtggac
acctttgagttggaacaactggaaatgcgttcattagcacaatttaattatctggaacca
ggtagcattcgacatatttacttctaccacaatgcccaagggaataaggctttatttggc
ttgttcatcccctctcaaaggaaggcttctgtatttgttcttgacactgtgcgcagtaat
caaatgccgaatttgaataatctatatgcatctgaacgcactgctatgctggagaaatta
gatgaagaactgctgccacctgataagcacacatttgaagttcaggcagaaaaagaccca
aagttaatctacagagcgattcagcgtcttttgctgaactataaggatgagaaaagagga
ccaactcttgttgcagtacaatcaaagtggcagctaaagaggctgacaaacgggatgtca
gttttggatgagtttccattggtgcctgttcatgtaaatgatgatattagttatggtgta
ctggattggcagcgccatggtgtccgcagaatgatcagacactacctcaacttggatagt
attttgtccaaggcttttgagatggccaggtattatcatattcctattggaaatcttcca
gatgacatctcaacctttggatcagacctcttcttttccagacatcttagacgacataac
catctgttgtggctttctccaacatcacgacctgatctgggaggaaaggaagcagacgat
aatcgcctggttatggaatttgatgaaaagtcaacagttgagattaataatccagggtgt
tactccacagtttctgtggaactggatattcagagtttggctgtgaacaccatccttcag
tctcatcacattaatgatatggagggggcatccagtattggtatcagcttcgatgtaatc
cagcaagcttcccttgaagacatgatggctggtaatcaggcagctaatgcacttgccagc
tatgatgaggcagctttatgctccaacactttcagaattttgaaaagcatggttgttggc
tgggtgaaggagatcactcactatcaaaatgtttatgctgataaccaagtgatgcacttt
tatcgttggctgcgatcaccttcatcactgctatatgatcctgcactacaccgtattctt
cagaacatgatgaagaaactgtttcttcagctggtagcagaatttaaaaggttgggttca
tctgtcatctatgctaacttcaaccggctactgctatgcaccaagaagcgccgaattgag
gattctatgggatatgtggaatacatcacaaagagcattcattcccgtgagattttccac
tccctctccatctcgttttctcgctgctgggaatttctgctttggatggacccaactaat
tacgctggcatcaagggtaaactttcctccagtattctcattggagaggtggagagcaat
aaaggaacaaaggaaaatgttgaagatgacagcaatgatgatgaagagattcattctgaa
gatgaggaaactggcactgatgttgaagaccttttagacaataactggaatatcatgcat
tatctgccgcaagcatcatcttgtcagagctacttcctcatgattgtctcagcttacatt
gtagctgtgtaccacagcatgaaggaagaactacgacgcagtgctccagggtgtactcct
ataaaacggcgaggcacaagccaaatctcacaagagccagcaggcgaaacaggagcttct
gcaggaatgattaccttctctcaggaatatgtgtctaatgagctcacacacaactttttc
actatcactcaaaaaattctgaagaaagtgagcagcaatagacactccactgagccttcc
gaaatgttcccggttctgccaggctcctatcttccattcaacaatcctgcactggaattc
atcaaatcagtctgtaagatcttgtctctggattcgaacataaccaaccaggttaataag
ttgaaacgtgatcttttacgtctaattgatgtaggggaattctctgaggaagctcaattt
aaagacccctgccagtcctacatattagctgaggttatctgcaagaattgcaacttctgc
catgacctggacctttgcaaagatccttccatcttgcaggatggcgctgtactacccaag
tggtgctgcactaattgtcagactgaatatgactcagattctatagaaatacaattggta
gaagcactgaagaagaaaatgatggcctatacccttcaggatctggtttgttcaaaatgt
aaaggcatcaaagaagccaacatgcctgtttattgtacttgcgcccgggactttgatttg
accatttccataaagggatttacggagcaaatccaagtatttagaaatattgccagacac
tacagtatgccattcttgttggagactgttgattggatgtttaggatgaatacacaccta
aggccatga
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integrated database retrieval system
