Hemiscyllium ocellatum (epaulette shark): 132827152
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Entry
132827152 CDS
T09720
Symbol
ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hoc03009
]
132827152 (ddx54)
Enzymes [BR:
hoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132827152 (ddx54)
Ribosome biogenesis [BR:
hoc03009
]
Eukaryotic type
Pre-60S particles
Helicases
132827152 (ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
132827152
NCBI-ProteinID:
XP_060699669
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All DBs
Position
24:complement(34219564..34270821)
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AA seq
847 aa
AA seq
DB search
MALKKKRPNRGRKPRAHSQPHHRDVDVESDGGEFQLAPLTEEDDSVGKHNNRCLPSFPSG
DCPSDVEPDTREMVRQQNRKKKSGGFQSMGLSFPVFKGIMKKGYKVPTPIQRKTIPVILD
GKDVVAMARTGSGKTAAFLIPLFERLKVHNAQSGARALILTPTRELALQTMKFTKELGKF
SGFKTALILGGDKMEDQFEALHENPDIIIGTPGRLMHIVVEMNLKLQNVEYVVFDEADRL
FEMGFAEHLQEIIRRLPDSRQTLLFSATLPKQLVEFARAGLTEPVLIRLDVDTKLNDQLQ
MAFFHVRSDDKAAVLLHLMRNIIKPQEQTVIFVATKHHVEYLKELLTRQGIDCSYSYSAL
DQTARKINIGKFVHRKCMVMIVTDVAARGIDIPMLDNVINYNFPSKAKLFLHRVGRVARA
GRSGTAYSLVALDEIPYIYDLYLFLGRPLKFASQAENSEGTSGIYGKVPQNTIDDEESLL
IADHKASLDLQNLKRVSENAYMQYLKSRPNPSPESIKRVREMDLSTLGIHPLFGVNIKDA
ELQRLKLIDSIKNYKAKSTIFEVNSTNKTSASEIMRVTRNKQILLINKFQKLKEEKKTAP
SKNMPTPMEADLPDEDNIETVFSEVMGRKRKSKQPTEHFPKNKKECEQDEEFYIPHQPKD
FNSERGLSLSGEGTSFEQQASGAVLDLMGDETQDLQKRKQMLKWDRKKKRFIRDTSQDNK
KIKTESGRYISASYKKNIYEEWKKKYKIDDRVSDDEAESERRNPRKKGGRGGRGNSHSFP
RKQGQQHGVRSELKTKAEILKNRKRKEKLQFLHRGGMKKLKLKSRQRVREMKSMAFGRGK
GKMRKKM
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaagaagaagcggccgaacagaggccggaaaccccgggcccacagccagccc
caccatcgcgatgtcgatgtagagagtgacggcggggagttccagttggctcctttaacc
gaggaggatgacagtgtgggcaagcacaacaatagatgtttaccaagctttccttcaggt
gattgtccatcagatgtagaaccagacacgagagaaatggttcggcaacagaatagaaag
aagaagtcgggaggctttcagtccatgggtttgagctttcctgtttttaaaggtattatg
aagaaaggatacaaagtaccaacaccaattcagagaaagactatccccgtgatattggat
ggcaaggatgtcgttgcaatggcacggacaggtagcggtaagactgcagcattccttatt
ccgttgtttgaacgactgaaggtgcacaatgctcagtcaggagcaagagctttaatcctt
actccaaccagagaactggcgttacaaaccatgaagttcactaaagagctgggaaagttt
tctggcttcaaaacagctttaatcttgggtggagacaaaatggaagatcagtttgaagca
ctgcacgaaaaccctgacataataattggcacaccgggtcgtttaatgcatatagttgtg
gaaatgaacttaaagctgcagaatgttgaatatgtggtctttgatgaagcagacagatta
tttgagatgggatttgctgagcacttgcaagagattatccgaaggctgcctgactcaaga
cagactttgctgttttcagctacactaccaaagcaactggtggagtttgcacgtgctggt
ttgacagagccagttctaatcagactggatgtggatactaagctgaatgatcagttgcag
atggcatttttccatgtccgctctgatgataaggctgctgttctacttcacttgatgaga
aatatcataaaacctcaagagcagactgtcatttttgttgctaccaaacatcatgtggaa
tatttaaaagagctcttaaccagacagggtattgactgttcatacagctacagtgctctt
gaccaaacagcaagaaaaatcaacattgggaaatttgtccacagaaaatgtatggtgatg
atcgtcactgacgttgcagctcgtggtattgatattcccatgctagataatgtaataaac
tacaactttccatccaaagcaaaacttttcttgcatagagttggtcgagtagccagagct
gggagaagtggtacggcttactcgttggtagccctggatgaaattccatatatttacgat
ttatatttgtttctcggacgacctctcaaatttgcaagccaagctgagaattctgaagga
acaagtggaatatatggcaaggtaccccagaataccatagatgatgaggaatcactactt
atagcagaccataaggcttcgctggatcttcagaacctgaaaagagtgtctgagaatgct
tacatgcagtacctgaagtcaagaccaaatccttctccagaatcaataaaaagggttaga
gaaatggacttatcaacattggggattcatcctttatttggtgtgaacataaaagatgca
gaacttcaaagactaaagcttattgacagtatcaaaaactataaagcaaaatctaccatt
tttgaagtcaattctacgaataaaacctctgcaagtgagatcatgagggtgacacgaaat
aaacagattttgcttataaacaagtttcaaaaattgaaggaagaaaagaaaacagctcca
tctaagaacatgccaaccccgatggaagcagatctccctgatgaagataacattgagact
gtcttttctgaagttatgggaaggaaaaggaaaagtaaacaaccaacagaacattttcct
aaaaacaagaaagaatgtgagcaggatgaggaattttatatcccccaccaacctaaagac
ttcaattccgaaagaggattaagtttaagtggggaaggtacatcctttgaacagcaggca
tctggagctgttttagatttaatgggtgatgaaacacaagatctgcaaaagagaaaacaa
atgctaaagtgggaccgtaaaaagaagcgatttatcagagacaccagccaggataataag
aaaataaagactgaaagtgggcgatatatcagtgcttcatacaagaaaaacatctatgag
gaatggaagaagaagtacaagatcgatgaccgagtatccgatgatgaagctgaaagtgag
cgaagaaatccaaggaagaaaggtggccgtggtggacgaggaaattctcattccttccca
agaaaacaggggcaacagcatggagtgcgttcagagctgaagaccaaagctgaaatcctc
aaaaatagaaagagaaaagaaaaattgcagttcctacatcggggaggaatgaaaaaactg
aagcttaagagtcgccaacgtgtaagagaaatgaagagcatggcctttggtagaggcaaa
gggaaaatgcggaaaaaaatgtaa
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