Hemiscyllium ocellatum (epaulette shark): 132827162
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Entry
132827162 CDS
T09720
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132827162
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
132827162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
132827162
NCBI-ProteinID:
XP_060699684
LinkDB
All DBs
Position
24:complement(37934796..38175796)
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AA seq
2224 aa
AA seq
DB search
MTAANWVANGASLEDCHSNLFSLAELTGIKWRRYSFQGLGGCGPIISAPAQDDPILQTFI
RCLQANLLCVWRRDVRPEAKELWIYWWGEEPNLVDIIHHELRVVEDGLWENGLTYECRTL
LFKAIHNLLERCLMDKNFVRIGKWFVKPYEKNEKPVNKSEHLSCSFTFFLHGESNVCTSV
EIAQHQPVYLVNEEHINMALSSASPFQVIISPFGLNGTLTGQTYKMSDPATRKLIEEWQY
FYPMVLKKKETKEEEEMDCDDDFPVAVEVIVGGVRMVYPSAFVLIPQGDIPVVSNAANAG
GHTNPTQGSLSVKDTLSCGLPLTPPTSPEQTIIAGDGIAPTVTGQMSGQEGVATASSPKH
TGRVPQKVTNQMVQNVWKECNVNKTQLKRHSTSENSEEEMASNAASWDFTEPGQRVNCSC
SRQKLLKQRSTTGANRPPPISQPGFNAGLPSASSLPSSASSKHKTNEKQEKGDKQQKRPM
TPFHHRPSLTDELCMEQDPTGQKLGLVGIDVSLEMHSSRKYGKPASGHPGNQSKPLNLNP
MDSPHSPISPLPPTLSPQPRGPEAEGLEGAPEPINPLLYSNGLELQAIPSLDDKTGLLSQ
RLPPVPEVSETTLYSGITAQNLESSDRISWQCYKTPTHVEGEFRPPELHCDRCDNKIDNP
DGSALRRLLAQPHKRFKVSEERVQMQIQEMNYLDPTRLIQQHNEGPGELNDPYTFVDGDI
EYSFTSIKKSKLASEKDTSKKSQPNKLEDGFGTREAPSSHATQLPDGKDAMSIFNTAPKS
ETRQSPTGRIVPASLTRETDLVVSLNDLDNLFDNSDDEENGTSSPTRSKQANAGSEDKAV
GKDVKTTGPYPPTVADLQRMFPTPPSLEQHPAFSPVMNYKDGVNSEMPAGMSSMENPVGT
MTATQFTEFKMQVEDRLGSPKPEEITDFSYVHKPPKAKGFVGSSMFAPLKAVPSQCLAPL
KIPDACIYRPSWAIPPKIEQLPVPPPASLNRDGYVNVPSVGSLTEDYIQMSTPQMSTPLA
VSSTAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSADMCSPA
STPSTTRPLNSVEPATIQSIPQAHSLYVTLILSDSVMNFFKDRNFDSCCICVCNMNIKGA
DVGLYIPDPTNEAQFGCTCGFSAVVNRRLGYNAGLFLEDEFDIFGRTSEIGQAAERRLIL
CRNSVVPQGFDGSKRLQDLTANLIFLVQDQCTGPFTSLSSLDYISLDRSALQSANWNYDK
LRADSSDSCTECFNALEQGRQYVDNPSGGRIDEALIRSRSLHPWPNSNVLDISILSSQDV
VRMLLSLQPFLQDAIQKKRTGRTWDNIQHVQGPLTWQQFHKIGRGSYGSEESPEPLPIPT
LLLGYDKDFLMISPFALPFWEKLLLEPYGSQRDVAYIVVCPENEALLTGAKNFFRDLSAV
YETCRLGEHRPICKVLRDGIMRVGKSSAKKLADESVDEWFSQAWVSDENDNLAKLKLYAQ
VCRHHLAPYLATLQLDNSLLIPPKHQPTSSSGTQGQATTGSGGPSLGTGVTSAPVTTGTT
ATATTSTGSSNATTGSTGVGSGSTGTCSTSTTSTTTTTTTPVLHQTGTIPSSSGFGGTVG
AAQVQSGSSGTSTERPPANTPSGSGDSDAQSSAQQQEVQESTTERERIGIPTEAESADSN
AYPPAVVIYLVDPFTYSSEDESSFTSGWLLGLLRCYMEMLDNLPEHMRNAFTVQIVPCQY
LLQPVKDDHTFYIQHLKSLAFSVYTQCRRPLPTQIHIKSLTGFGPASTIDMTLKHSERPH
PIQVYSPPYILAPIKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLASCTDLHGELL
ETCILNIDVPNRSRRSKVPARKIGLQKLWEWCVGIMQMTSLPWRIVMGRLGRVGHGELKD
WSILIGRRSLQSTSKQLKETCTMCGISAADSPTILSACLVALEPQGSFVVMPDAVTMGSV
FGRGTALNLQTSQLNTPQDASCTHILVFPTSAATVVANTEALEALGNQDGIGILEEDIFA
EDFDNDIRILITGNLHPSPTSSPVLSPGSPTGTGAGSHFQHSSEAGRGQGGERLLSTEAH
EEVANVLQQPLALGYFVSTAKAENLPQWFWSACPHAQNQCPLFLKASLHHHVSLAQSDEL
LPGKHSHPHPLDSNRTSDVLRFVLEQYNALSWLNCNPATQDRQSCLPVHFVVLTQMYNAI
MNLL
NT seq
6675 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagcaaactgggtggccaacggtgctagcttggaggactgccattcgaattta
ttctctctggctgaactaactggcatcaaatggcgtaggtacagtttccagggtctaggg
ggctgtggtcccatcatctcagcaccagctcaggatgatcctattctgcagacatttatt
cgatgtctacaagccaatctgctatgtgtatggagacgagatgtgaggcccgaagccaag
gagttgtggatttactggtggggagaggagccgaatttagttgatataattcaccatgag
ttacgagtggtggaagatggtctctgggaaaatggacttacgtatgaatgccgaacactg
ctcttcaaagctattcacaatttgctagaaaggtgtctgatggataagaactttgttagg
attggaaagtggtttgtcaaaccctacgagaaaaatgagaagcctgtcaacaaaagtgaa
cacctttcttgttcctttaccttctttctgcatggagagagcaatgtctgcacaagtgtt
gaaattgcccaacatcaacctgtgtaccttgtcaatgaagagcacatcaacatggcacta
tcatcagcctcacctttccaagtcatcattagtccgtttgggctgaatggcacacttaca
ggccagacatacaagatgtctgatccagctacaaggaaattgattgaagaatggcaatac
ttctatccaatggtactgaaaaagaaagaaacaaaggaggaagaagagatggattgtgat
gatgactttcctgtagctgttgaggttattgtaggtggagtgagaatggtatacccatca
gctttcgtgttgattcctcagggggatatccctgtagtttcaaatgctgctaatgcagga
ggccatacaaatccaacacaaggatcattaagtgtgaaggacaccttaagttgtggattg
ccactcacaccacccacctctcctgagcaaaccataatagcaggtgatgggattgcaccg
actgtgactggtcaaatgagtggacaagaaggagtggcaactgcatcaagcccaaaacac
actggtcgagttcctcagaaagtaaccaatcagatggttcagaatgtctggaaagaatgc
aatgtgaacaaaacacaactgaaaagacattcaactagtgaaaattctgaggaagagatg
gccagcaatgctgcttcctgggattttacagagcctggccaaagagtgaattgttcttgt
tcaaggcaaaagcttctaaaacagcgaagtacaacgggcgcaaaccgccctccacccatc
tctcagcctggctttaatgctggtctcccttccgcttcttctttgccatcatctgcgtct
tctaagcacaaaacaaatgagaagcaggaaaagggagataagcagcagaagcgacctatg
actccatttcatcatcgaccttcgttaactgatgagctttgcatggagcaagatccaaca
ggacagaagcttggattagttggtattgatgtctccttggaaatgcacagcagcaggaag
tatggcaagccagcatctggacatccaggaaaccagagcaagccactaaatttgaatcct
atggattctccacattctcccatctctccacttccaccaacgctcagcccccaaccgaga
ggtccagaagcagaaggtttggaaggagctccggagcccattaatccattactatatagt
aatggtctagaacttcaggcgatccccagccttgatgataagactgggcttttatcacaa
agactaccaccagtgccggaggtcagcgagactactctatatagtggtatcactgcacaa
aatttggagtcatcggacagaatctcatggcagtgttataagactccaacccatgtagag
ggagagttcaggccaccagaactgcactgtgacagatgtgacaacaaaattgataatcca
gatggttcagcactaagacgacttctagcacagcctcataaacgattcaaagtttcagag
gaaagagtacaaatgcaaatccaggaaatgaattatctggatccaactagacttatccag
cagcataatgaaggtcctggagaacttaatgacccttacacttttgtggatggtgatatt
gaatacagcttcacttcaattaagaagtcaaaacttgcatctgaaaaagatacatcaaag
aaatctcaaccgaacaagctcgaagatggatttggtacgagggaagctccatctagtcat
gctacacagttgcctgatggaaaagatgccatgtctatttttaacactgctccaaaatca
gaaacacgacaatctccaacagggcggatagttcctgcaagcctcacacgagagactgac
ctagtggtttctttgaatgacctggacaatctttttgacaactctgatgatgaggaaaat
gggacatcttccccaacacgctctaagcaagcaaatgcaggatcagaagacaaagctgtt
ggaaaagatgtgaagacaactgggccttatcctccaactgtcgcagatctgcaaagaatg
tttccaacccctccatctttagaacaacatccagcattttctccagtaatgaattacaaa
gatggtgttaattctgagatgcctgcagggatgagtagcatggagaatccggttggtact
atgaccgcaactcaattcacagaattcaaaatgcaagtggaagatcgactgggcagtcct
aagcctgaagaaataacagatttttcttacgtgcacaagcccccaaaagctaagggtttt
gttggatcttcaatgtttgcaccactaaaggccgtgcccagtcaatgccttgctccactg
aaaataccagatgcctgcatataccgaccatcatgggctattcctccaaaaatcgaacaa
ttgcctgtaccaccacctgcttcattaaatcgggatggatatgtcaatgtgcctagtgtt
gggagtctgacagaagattatattcagatgagcactcctcaaatgagcacacctttggca
gtaagttctactgcacctgccagcaacagtggtgctggtgtgttgccctctcctgcaacc
cctcgcttctctgtcccaacacctcgtacaccaaggacaccacgaactccacggggtggg
ggcactgccagtgggcaaggatcagtgaagtatgatagtgctgatatgtgttcccctgct
tcaacaccttcaaccacacgaccattgaactctgtggagccagcaaccatacagtcaatt
ccccaggcacacagcttgtacgttacgctaatcctttcagattcggtgatgaatttcttc
aaagatcgcaacttcgatagctgctgtatctgtgtttgtaatatgaatatcaaaggggcg
gatgttggtttatacatcccagatccaaccaatgaagcccagtttggatgcacctgtgga
tttagtgctgtcgtaaaccgcagacttggatataatgcaggtctctttctcgaggatgaa
tttgatatttttgggaggacatcagagattggtcaagctgcagaaagacgattgatattg
tgtcggaattctgttgttcctcaaggatttgatgggtcgaagaggctacaagacctaaca
gcgaacttaatttttcttgtacaggatcagtgtacaggacctttcacttctctaagttct
ctagactatatttccttagatagatcagcacttcaatcagcaaattggaactatgacaag
ctgagagcagatagtagcgattcttgcacagagtgtttcaatgccctggagcagggtcga
caatatgtggataatccatctggtggaagaatagatgaagcactaattagaagcaggagt
ttacacccatggcccaatagtaatgttctggatattagcatcctttcatcccaggatgtg
gtccgcatgctgctatcactgcagccttttctccaagatgccattcaaaagaaacggaca
ggaaggacatgggacaatatccagcatgtgcaaggacctctcacctggcaacaattccac
aagataggcagaggatcctatggttcagaagaatcaccagagccacttcccatccccaca
ctgcttctgggctatgataaagacttcctgatgatctctccttttgcactgcccttttgg
gagaagctgcttctagaaccgtatggttctcagcgtgacgtagcctacattgtggtctgt
ccagaaaatgaggccttgctcactggagccaaaaatttcttcagggatcttagtgctgta
tatgagacatgcagacttggtgagcatagaccgatctgcaaagtattgagagatggaatt
atgcgggttggtaagagttctgcaaagaagttggcagatgaatctgttgatgaatggttc
tcccaagcttgggttagcgatgaaaatgacaatcttgccaagttaaagctatatgctcaa
gtctgtcgccatcacttggcaccttacctggctacacttcagttggacaacagcctgctg
attccacctaaacaccagccaacatcatcttctggtacccaggggcaggcaacaactgga
agcggtgggccatcattgggaactggggttacttctgcaccagtgacaactggcaccaca
gctactgccacaaccagcactggcagtagcaatgcaacaactggcagcactggtgttgga
agtgggtcaacaggtacctgctccacttctactacctccactaccaccacaaccactacc
ccagttttgcatcaaacaggtacaatcccatcctcttcaggatttggtgggactgttgga
gctgctcaggtgcagagtggtagctcaggcaccagtactgagaggcctccagcaaataca
cccagtggcagtggagattcagatgcccagagttctgcacagcagcaagaagtgcaagag
agtactacagaaagggaacggataggaattcctaccgaagctgagtcggctgacagcaat
gcatatccaccagctgtcgtcatttatcttgttgatccttttacatattcctcagaagac
gagtcatcttttactagcggatggctgttaggcctattaaggtgctacatggagatgctg
gataatctaccagagcatatgaggaatgcattcactgtccagattgtgccttgccagtat
ctactacaaccagtgaaagatgatcacactttctatatccagcacttaaaatcactggca
ttctcggtttacacacaatgtagacggccgcttcccacacagatccacattaaatcacta
actggctttggtcctgcttccacaatagatatgacccttaagcattcagagcgtccccat
cctatccaggtatattcgccaccttatatcttggcaccaattaaagacaaacaaacagag
ctgggtgagacatttggagaggcaagccagaagtacaacgtgctctttgttggttattgt
ttatcacatgatcagaggtggcttctagcatcatgtaccgaccttcacggggaattactg
gagacatgcatcctgaacattgatgtcccaaacaggtcaaggagaagtaaagtgcctgct
cgtaaaattggcttgcagaagctatgggaatggtgtgttggaattatgcagatgacatca
ctgccatggagaattgtaatggggagacttggaagagtaggtcatggagaactgaaagat
tggagtatcctaattgggcgacgctcactacagtctaccagtaagcaattgaaggagact
tgcacaatgtgtggtatatctgcagcagattctcccacaattctcagtgcctgcttggtt
gccctggagccacagggttcatttgttgttatgcctgatgctgtcacaatgggttctgtg
tttgggcgtggtacagctctcaacttgcaaacatctcagttgaacaccccacaagatgca
tcctgtacgcacattctggtttttccaacatctgctgctacggttgttgccaatactgaa
gctttggaagctcttggtaaccaagatggtataggaattttggaagaggatatttttgct
gaagactttgacaatgacattcggatcctgataactggtaatcttcacccatctcccacg
tcttctcctgtactgtctcctggttcacctactggcacaggggcaggctctcattttcaa
cacagcagtgaagctggcaggggtcaaggaggtgaacgactcctctctacagaagctcat
gaggaagtagcgaatgtattgcagcaacctcttgctcttggatactttgtttcaactgcc
aaagctgaaaatctccctcagtggttctggtctgcctgtccccatgcccaaaatcagtgc
ccgttgtttctaaaggcctcattacatcaccatgtctccttggcacaatctgatgaacta
cttcctggcaagcactcccatcctcaccctctggattccaatagaacttcagatgttttg
agatttgtactagaacagtataatgccttatcatggctcaactgcaaccctgccacacaa
gatcgccagtcctgtctacccgtccactttgtggtgcttactcaaatgtacaatgccatt
atgaatttactttga
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integrated database retrieval system
