Hemiscyllium ocellatum (epaulette shark): 132827180
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Entry
132827180 CDS
T09720
Symbol
msi1b
Name
(RefSeq) RNA-binding protein Musashi homolog 1b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132827180 (msi1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132827180 (msi1b)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132827180 (msi1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
132827180
NCBI-ProteinID:
XP_060699725
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All DBs
Position
24:45110993..45260094
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AA seq
372 aa
AA seq
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MEADANQANSVLSADSQHDPCKMFVGGLSWQTTQEGLKEYFCKFGDVKECMVMRDPVTKR
SRGFGFITFVDQAGVDKVLAQPRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVN
TTVEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV
ECKKAQPKEVMSPTGTARGRSRVMPYGMDAFMLGIGMLGYPGFQAASYASRGYTGLAPGY
TYQFPGPLLLPPATTLPSSAGRAGQSGVQTSQWPPSMLLQDWPTGAIPLTAYGPMAAAAA
AAVVRGTGSTPTRTGGFLGTTSPGPMADLYGAANQDSGVSSYISAASPAPSTGFGHSLGG
PLIATAFTNGYH
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggacgctaaccaagccaattcggtgctcagtgcagactctcagcacgatccc
tgcaaaatgttcgtcgggggactcagctggcagaccacacaagaaggtctcaaggaatat
ttctgtaaattcggagacgtgaaggagtgcatggtgatgcgggatcctgttacaaagcgg
tcaagaggatttggatttatcacttttgttgaccaagcgggcgtagataaagttctagcg
caacccaggcatgaactagattctaaaacgattgatcctaaagtggcttttccacgtaga
gcgcagccaaagatggtgaccagaacaaagaagatctttgtgggcggattatctgtaaat
accacagtggaggatgtcaagcagtattttgaccagtttggaaaggtagatgatgcaatg
ctgatgtttgacaagacaaccaatcgacatcgaggctttgggtttgtaacatttgagagt
gaagatatcgtggagaaagtgtgtgagattcacttccatgaaatcaacaacaaaatggtg
gagtgtaagaaggcccagcccaaggaggtgatgtcaccaacagggaccgccaggggtcgt
tctcgagtgatgccctatgggatggatgcctttatgttgggcattggcatgctcgggtac
ccaggcttccaggctgcttcatatgcaagtcgtggttacacagggctcgctcccggttac
acctaccagtttcccggtcccttattgttacctccagccactacccttccatcttcagca
ggccgggcagggcagtctggggtacaaacctcacagtggcccccatcgatgctgctccag
gattggccgacgggagcaatccccctgactgcatatggaccaatggcagcagctgcagca
gcagcagtggttcgagggacaggttcaaccccaacccgcactggagggttcctgggcacc
accagcccaggccccatggcagacctgtatggggcagcaaaccaggactctggggtcagc
agttacatcagtgcagccagcccagccccgagcactggattcggccacagtctagggggg
cctttgattgcgacagctttcacaaatggttaccactaa
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