Entry |
|
Symbol |
smn1
|
Name |
(RefSeq) survival motor neuron protein 1
|
KO |
K13129 | survival motor neuron protein |
|
Organism |
hoc Hemiscyllium ocellatum (epaulette shark)
|
Brite |
KEGG Orthology (KO) [BR:hoc00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:hoc03041]
132827246 (smn1)
Spliceosome [BR:hoc03041]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
132827246 (smn1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2:complement(42580027..42597835)
|
AA seq |
281 aa
MGEDSQVGEVVFRRGCGQSDDSDIWDDTALIKAYDKAVTSFKSALKNGEYIQPFTTDYSR
TGTKQKQKKNKNRKKSHVHPERKWRVGDACHAVWSEDGNMYSATIKSVNEKRGTCVVMYT
GYGNEEEQNLAELVPADSSEAENESSKQKNGLSQQSTDESDAISPVYKSCQSNETKLKTP
LDQFTWNHCLPPQPPQMPGFGFPGAKFHGPPPFLPGWLPTVPAGPPLIPPPPPMGPDSTD
EDEEALGSMLIAWYMSGYHTGYYLGLKQGRLEAGMGKTPRS |
NT seq |
846 nt +upstreamnt +downstreamnt
atgggggaggacagtcaagtgggagaggtggtgttcaggcgtggctgcggacagagcgac
gactcggacatctgggacgacacggcgctgataaaggcatacgacaaggcggtgacctcc
ttcaaaagtgccctgaagaatggtgaatatattcagccatttaccacggactacagtaga
actgggacaaaacaaaaacagaagaaaaacaaaaacagaaagaagagtcacgtgcatcca
gagagaaagtggcgagttggtgatgcctgtcatgcagtgtggtctgaagatggcaacatg
tactcagctacgattaagtctgttaatgaaaaacgtggaacatgtgtagtgatgtatact
ggttatggcaatgaagaggagcagaatctagcagagctggttccagctgacagttctgag
gcagagaatgagagttctaaacagaaaaatgggctcagccagcaatcaacagatgaaagt
gatgccatttcacctgtctataaatcttgccaatcaaatgaaaccaaattaaaaacacca
ttggatcagtttacctggaatcactgtcttccccctcaaccaccacaaatgccaggattt
ggctttcctggtgcaaaatttcacggtccgccgcctttcttacctggatggttaccaact
gttccagcaggaccaccattaattccccctccacctccgatggggccagattcaactgat
gaggatgaggaagctttaggaagcatgctaatagcatggtacatgagtggctatcacact
ggttattatttgggtctcaagcaaggtcgactggaagcaggcatggggaagactcctcgt
tcttag |