Hemiscyllium ocellatum (epaulette shark): 132827294
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Entry
132827294 CDS
T09720
Name
(RefSeq) uracil-DNA glycosylase-like
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132827294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132827294
Enzymes [BR:
hoc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
132827294
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
132827294
Prokaryotic type
132827294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
132827294
NCBI-ProteinID:
XP_060699913
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All DBs
Position
24:13928587..13939850
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AA seq
315 aa
AA seq
DB search
MIGQKTIASYFGPVAKKRTLSEASEEGVENGKDHYQEEEHNGMRTPVKKLKAGPDGEVAP
VVKPSSPLSPEQLSRIERNKQAALQRLAARNVPPGFGESWKSELLMEFSKPYFIKLMGFI
ASERRRYTVYPPPQEVFTWTEMCNFHDVKVVILGQDPYHGPNQAHGLCFSVKRPVPPPPS
LENMYKELQSDIEGFEPPGHGDLTGWAKQGVLLLNAVLTVRAHNANSHKERGWEDFTDAV
VSCLNDKLDGLVFMLWGAYAQRKGSVINRKRHHVLQTVHPSPLSVNRGFFGCKHFSKTNE
LLKKSGKTPINWKLL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggcagaaaacgattgcgtcttatttcggtcccgtggctaaaaaaagaactttg
tctgaggcttcagaggaaggtgttgagaatgggaaggaccattatcaagaggaggaacac
aatggcatgaggaccccggtcaagaagctgaaggctggcccggacggagaggtcgcgccg
gtggtcaagcccagctccccgctcagccccgagcagctgtcccgcatcgagaggaacaaa
caggcggccctgcagagactcgctgcccgcaacgtgcccccgggctttggggagagctgg
aagagcgagctgctgatggagttcagcaaaccgtactttatcaagctgatgggatttata
gcgtcagagaggaggcggtacacagtttacccaccacctcaggaagtcttcacgtggaca
gagatgtgtaacttccatgatgtgaaggtggttattcttggccaggatccgtaccatgga
ccgaaccaggcccacggactgtgcttcagtgtaaagcgcccagtgccacctccccccagt
ctggaaaacatgtacaaggagcttcagtctgacattgaaggctttgagcccccaggacat
ggtgatctgaccggttgggctaagcaaggagtgttgttgctgaatgcagtcctcactgtg
cgagcgcacaacgcaaactctcacaaggagcgaggctgggaagatttcaccgatgcagtt
gtgtcttgtctgaatgacaagctggatggtttggtgttcatgctgtggggagcgtacgca
cagcgcaaaggcagtgtaatcaacaggaaacgtcaccacgtactgcagacggttcatcca
tctcctctgtctgtgaaccgaggcttctttggctgcaaacacttctctaaaaccaatgaa
ttgctgaagaaatctgggaagacacctatcaattggaagttgctgtga
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